Definition Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome.
Accession NC_000909
Length 1,664,970

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The map label for this gene is 15669654

Identifier: 15669654

GI number: 15669654

Start: 1431522

End: 1432223

Strand: Reverse

Name: 15669654

Synonym: MJ1463

Alternate gene names: NA

Gene position: 1432223-1431522 (Counterclockwise)

Preceding gene: 15669656

Following gene: 15669653

Centisome position: 86.02

GC content: 33.33

Gene sequence:

>702_bases
GTGGTTGTAGATGCAAAAGAAGTAGAGATGATAAATACCTTAGTTTTTGAGACATTAGGAAATCCAGAGAAGGAGAGAGA
ATTTAAGTTAAAATCATTGAAGAGATGGGGATTTGACTTAATATTTGGTAAAGTAGATGGAAAAGAAACATATTTCACTG
TTGAATTAGATGAAAGAAAAGCTGGAGATAAGTTTTCAAAGGATGGAAAGGAGTATGAAGTTATCGAAGTTCTTCAAGAA
TTGCCAAAAAACACTGAGCTCTATGCACACATAGAAATGGAGATGGGTAAAGCATATATTGTCTGTCAATTAAGAGATGA
AGATGGAAAAAACACAGAAGTTTTAAGAGTTCCAGCAGCTACTTTATTGTTAGCTTTCCTTAAAAAGAATAAATTAGCAA
ACATAATAAAAGCAATAAAGAACGTTGGAATTAGTTTAGAACTTTCCATGCAGAATGGTGTTGGAGGAAAGCCATTATCT
TATGAAGAATTGCCAAACGTTGCAAGAAGGTTTATAAGAAGTGCAAGAAAGGTTGAGAAAGAAACTGGTTTTGGAAGGTT
GTCATTTGCATACTATGGAGAAACAAAAGATGGAGAACCAAGATATAGATTTAGCTGGCTGTTGCCAACAATTGCCTTAT
TTGACTTAGATATAGCTAAAAAAGTAGAACAAACCTTGGGAATCTTAAAGGTTTCTGAATAA

Upstream 100 bases:

>100_bases
TTTATAAATTTATCGATTATAGAAAATTTTTTATAGAACTTCAAACACATTTACAAATAGTTAAATTTTCAATAAAAAAT
ATGAATAAAAAGGTGATATT

Downstream 100 bases:

>100_bases
ATAAAATTTTTTGAGGTGAGATGATGATTTATGGGATTTTGTTAAATATTCCAGAAAAACATGCTACAAAGTATGAGGAT
TTAATTAGGAGAATAATTGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 233; Mature: 233

Protein sequence:

>233_residues
MVVDAKEVEMINTLVFETLGNPEKEREFKLKSLKRWGFDLIFGKVDGKETYFTVELDERKAGDKFSKDGKEYEVIEVLQE
LPKNTELYAHIEMEMGKAYIVCQLRDEDGKNTEVLRVPAATLLLAFLKKNKLANIIKAIKNVGISLELSMQNGVGGKPLS
YEELPNVARRFIRSARKVEKETGFGRLSFAYYGETKDGEPRYRFSWLLPTIALFDLDIAKKVEQTLGILKVSE

Sequences:

>Translated_233_residues
MVVDAKEVEMINTLVFETLGNPEKEREFKLKSLKRWGFDLIFGKVDGKETYFTVELDERKAGDKFSKDGKEYEVIEVLQE
LPKNTELYAHIEMEMGKAYIVCQLRDEDGKNTEVLRVPAATLLLAFLKKNKLANIIKAIKNVGISLELSMQNGVGGKPLS
YEELPNVARRFIRSARKVEKETGFGRLSFAYYGETKDGEPRYRFSWLLPTIALFDLDIAKKVEQTLGILKVSE
>Mature_233_residues
MVVDAKEVEMINTLVFETLGNPEKEREFKLKSLKRWGFDLIFGKVDGKETYFTVELDERKAGDKFSKDGKEYEVIEVLQE
LPKNTELYAHIEMEMGKAYIVCQLRDEDGKNTEVLRVPAATLLLAFLKKNKLANIIKAIKNVGISLELSMQNGVGGKPLS
YEELPNVARRFIRSARKVEKETGFGRLSFAYYGETKDGEPRYRFSWLLPTIALFDLDIAKKVEQTLGILKVSE

Specific function: Unknown

COG id: COG1851

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0128 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1463_METJA (Q58858)

Other databases:

- EMBL:   L77117
- PIR:   F64482
- RefSeq:   NP_248467.1
- ProteinModelPortal:   Q58858
- GeneID:   1452367
- GenomeReviews:   L77117_GR
- KEGG:   mja:MJ_1463
- NMPDR:   fig|243232.1.peg.1504
- TIGR:   MJ1463
- HOGENOM:   HBG538986
- OMA:   NTLVFET
- ProtClustDB:   PRK04205
- BioCyc:   MJAN243232:MJ_1463-MONOMER
- HAMAP:   MF_00264
- InterPro:   IPR005266
- PIRSF:   PIRSF016179
- ProDom:   PD023377
- TIGRFAMs:   TIGR00703

Pfam domain/function: PF03673 UPF0128

EC number: NA

Molecular weight: Translated: 26609; Mature: 26609

Theoretical pI: Translated: 7.35; Mature: 7.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVVDAKEVEMINTLVFETLGNPEKEREFKLKSLKRWGFDLIFGKVDGKETYFTVELDERK
CCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCEEEEEEECCCC
AGDKFSKDGKEYEVIEVLQELPKNTELYAHIEMEMGKAYIVCQLRDEDGKNTEVLRVPAA
CCCCCCCCCCCHHHHHHHHHCCCCCEEEEEEEEECCCEEEEEEEECCCCCCCEEEEECHH
TLLLAFLKKNKLANIIKAIKNVGISLELSMQNGVGGKPLSYEELPNVARRFIRSARKVEK
HHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
ETGFGRLSFAYYGETKDGEPRYRFSWLLPTIALFDLDIAKKVEQTLGILKVSE
HCCCCEEEEEEECCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCEEECC
>Mature Secondary Structure
MVVDAKEVEMINTLVFETLGNPEKEREFKLKSLKRWGFDLIFGKVDGKETYFTVELDERK
CCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCEEEEEEECCCC
AGDKFSKDGKEYEVIEVLQELPKNTELYAHIEMEMGKAYIVCQLRDEDGKNTEVLRVPAA
CCCCCCCCCCCHHHHHHHHHCCCCCEEEEEEEEECCCEEEEEEEECCCCCCCEEEEECHH
TLLLAFLKKNKLANIIKAIKNVGISLELSMQNGVGGKPLSYEELPNVARRFIRSARKVEK
HHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
ETGFGRLSFAYYGETKDGEPRYRFSWLLPTIALFDLDIAKKVEQTLGILKVSE
HCCCCEEEEEEECCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087