| Definition | Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome. |
|---|---|
| Accession | NC_000909 |
| Length | 1,664,970 |
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The map label for this gene is 15669620
Identifier: 15669620
GI number: 15669620
Start: 1399329
End: 1400840
Strand: Direct
Name: 15669620
Synonym: MJ1429
Alternate gene names: NA
Gene position: 1399329-1400840 (Clockwise)
Preceding gene: 15669619
Following gene: 15669621
Centisome position: 84.05
GC content: 32.21
Gene sequence:
>1512_bases GTGTATGTTATGAAGGTTGTAGGAAAGACTACAACAACACACTTTACTTTTGAATCCCTTGAAAAGATAAGATTTGGAGA GTATGTAATTGCAAAAAATGTTGATGGCAGAGATGTATTGGGTGTTATAAAAAATGTAGTTGCAGATGTTGAGAAATTTG TTGGTGAAGTTAAAGTCATTGGTGTATTGGATGGAAACAAAATAATTCCCAATAGAACACCAATACTCCCAAACAGTGAA GTTAGATTGTGTGATGATGAAATCCTAAATAATATATATCTAACTCCAGATGGGTTGAATATAGGTCATTTATTAACAAG AGATAATGTTAGAGTTTATTTAGACACAAATAAACTTGTATCAAGACATTTTGCAATACTCTCTATAACTGGAGGGGGAA AATCAAATACCGCATCTGTTTTGTGCAGAGAACTTGCAAAGAAAAATGGAACTGTAATAATGATAGACCCCCATGGAGAG TATATCTCTTTATATCATGAAGACATGGAGGGGAAAATAAAGGTAATAAATCCAATAATAAACCCTGTTTTATTAGCTCC AAGTGAATTTGCTAATTTAATTGGGATAGGCGATAATGAGATAGAGAAGAGAGTTTATGTGGAATTTGCATACCACACTG TAAAACATGAATGTCCAGATGCTAAAGGAATTGAGTTTATTGAAAAAATAGAAAATCTACTCTATGAATGGAGTAAGATA GCATCAGTTGGATGGGAAATTAAATATTACAACCCATTAAGAAGGAACTATGATAGAAGAAAATTAGAAAAGGAAGATTT CGTTATATTGATGTCTCTCATTGATACTATTAGCAAATTCAAATTAGATTATGCATTAAATATTGGGGATAGAGATGTAA TTGAAGAATTTGAAATTGGAAAAATAAACATCGTTAATTTAAGTGGGTTGGAGATTCCTCAGATGGTTACTTTTGTGGGA TTTATAGCTAAACATCTTCTTTTAAAAAGGATAACTTACTTAAAATCATTAAAGGATGTATATAGTATTAATGAGGAAAT TAGAAGAGTTGCACAATCAAACTTAAACATTATTGAATCACACTACAAAGTTGTAACAAAACCTGTCCTGTTAATTGTAG AAGAAGCTCATATATTTATTCCAGTAAATGAACAAAACTCAGCAAGCTTATGGTTGGGGAAGATAGCAAGAGAGGGAAGA AAATTTGGTGTTGGTTTAGGTTTAGTATCCCAAAGACCTAAGCAATTGCATCCTGATGTTTTATCTCAAACGAACACTAA GATAATTTTAAAAATAGTCGAACCAGAAGACCAAAAATATATACAGAGAGCTTCAGAAGAACTTGGAGAAGATTTGGTAA AAGATTTGGCATCTTTGGGTATTGGAGAAGCAGTAATTGTAGGAGCAGCAATATCCCTCCCATCAATAGTCAAAATTGAC AAATTTGATGGAGTATATGGAGGAAAGGATATAAACATAGTCGGAGAATGGATGGGTTTAGATGATTGGTAA
Upstream 100 bases:
>100_bases AGTTATCATTAGAGATGTACAGATACTGTGAATTAATTGATGATTATAAATCTGATGAGAGCGTTTTAATGCAAATAAAA GAGCTTCTCCAAAAACTTGG
Downstream 100 bases:
>100_bases CCATAGGAGGAAACCTCCTATTGGTATACCACCCGTCTATTAAGTTAGGACTTTCAGTCCTAATTAATATCCATATTTAG GTGATTTCATGGATGTGGAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 503; Mature: 503
Protein sequence:
>503_residues MYVMKVVGKTTTTHFTFESLEKIRFGEYVIAKNVDGRDVLGVIKNVVADVEKFVGEVKVIGVLDGNKIIPNRTPILPNSE VRLCDDEILNNIYLTPDGLNIGHLLTRDNVRVYLDTNKLVSRHFAILSITGGGKSNTASVLCRELAKKNGTVIMIDPHGE YISLYHEDMEGKIKVINPIINPVLLAPSEFANLIGIGDNEIEKRVYVEFAYHTVKHECPDAKGIEFIEKIENLLYEWSKI ASVGWEIKYYNPLRRNYDRRKLEKEDFVILMSLIDTISKFKLDYALNIGDRDVIEEFEIGKINIVNLSGLEIPQMVTFVG FIAKHLLLKRITYLKSLKDVYSINEEIRRVAQSNLNIIESHYKVVTKPVLLIVEEAHIFIPVNEQNSASLWLGKIAREGR KFGVGLGLVSQRPKQLHPDVLSQTNTKIILKIVEPEDQKYIQRASEELGEDLVKDLASLGIGEAVIVGAAISLPSIVKID KFDGVYGGKDINIVGEWMGLDDW
Sequences:
>Translated_503_residues MYVMKVVGKTTTTHFTFESLEKIRFGEYVIAKNVDGRDVLGVIKNVVADVEKFVGEVKVIGVLDGNKIIPNRTPILPNSE VRLCDDEILNNIYLTPDGLNIGHLLTRDNVRVYLDTNKLVSRHFAILSITGGGKSNTASVLCRELAKKNGTVIMIDPHGE YISLYHEDMEGKIKVINPIINPVLLAPSEFANLIGIGDNEIEKRVYVEFAYHTVKHECPDAKGIEFIEKIENLLYEWSKI ASVGWEIKYYNPLRRNYDRRKLEKEDFVILMSLIDTISKFKLDYALNIGDRDVIEEFEIGKINIVNLSGLEIPQMVTFVG FIAKHLLLKRITYLKSLKDVYSINEEIRRVAQSNLNIIESHYKVVTKPVLLIVEEAHIFIPVNEQNSASLWLGKIAREGR KFGVGLGLVSQRPKQLHPDVLSQTNTKIILKIVEPEDQKYIQRASEELGEDLVKDLASLGIGEAVIVGAAISLPSIVKID KFDGVYGGKDINIVGEWMGLDDW >Mature_503_residues MYVMKVVGKTTTTHFTFESLEKIRFGEYVIAKNVDGRDVLGVIKNVVADVEKFVGEVKVIGVLDGNKIIPNRTPILPNSE VRLCDDEILNNIYLTPDGLNIGHLLTRDNVRVYLDTNKLVSRHFAILSITGGGKSNTASVLCRELAKKNGTVIMIDPHGE YISLYHEDMEGKIKVINPIINPVLLAPSEFANLIGIGDNEIEKRVYVEFAYHTVKHECPDAKGIEFIEKIENLLYEWSKI ASVGWEIKYYNPLRRNYDRRKLEKEDFVILMSLIDTISKFKLDYALNIGDRDVIEEFEIGKINIVNLSGLEIPQMVTFVG FIAKHLLLKRITYLKSLKDVYSINEEIRRVAQSNLNIIESHYKVVTKPVLLIVEEAHIFIPVNEQNSASLWLGKIAREGR KFGVGLGLVSQRPKQLHPDVLSQTNTKIILKIVEPEDQKYIQRASEELGEDLVKDLASLGIGEAVIVGAAISLPSIVKID KFDGVYGGKDINIVGEWMGLDDW
Specific function: Unknown
COG id: COG0433
COG function: function code R; Predicted ATPase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.jannaschii MJECL08 and MJ1565
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y1429_METJA (Q58824)
Other databases:
- EMBL: L77117 - PIR: D64478 - RefSeq: NP_248433.1 - ProteinModelPortal: Q58824 - GeneID: 1452333 - GenomeReviews: L77117_GR - KEGG: mja:MJ_1429 - NMPDR: fig|243232.1.peg.1470 - TIGR: MJ1429 - HOGENOM: HBG512960 - OMA: EPNDQRY - ProtClustDB: CLSK2749991 - BioCyc: MJAN243232:MJ_1429-MONOMER - InterPro: IPR002789 - InterPro: IPR018538
Pfam domain/function: PF01935 DUF87; PF09378 HAS-barrel
EC number: NA
Molecular weight: Translated: 56698; Mature: 56698
Theoretical pI: Translated: 6.17; Mature: 6.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYVMKVVGKTTTTHFTFESLEKIRFGEYVIAKNVDGRDVLGVIKNVVADVEKFVGEVKVI CEEEEEECCCCEEEEEHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCEEEE GVLDGNKIIPNRTPILPNSEVRLCDDEILNNIYLTPDGLNIGHLLTRDNVRVYLDTNKLV EEECCCEECCCCCCCCCCCCCEECCHHHHCCEEECCCCCCCCEEEECCCEEEEEECHHHH SRHFAILSITGGGKSNTASVLCRELAKKNGTVIMIDPHGEYISLYHEDMEGKIKVINPII HCCEEEEEEECCCCCCHHHHHHHHHHHCCCCEEEECCCCCEEEEEECCCCCCEEEECHHC NPVLLAPSEFANLIGIGDNEIEKRVYVEFAYHTVKHECPDAKGIEFIEKIENLLYEWSKI CCEEECCHHHHHEECCCCCHHHHEEEEEEHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH ASVGWEIKYYNPLRRNYDRRKLEKEDFVILMSLIDTISKFKLDYALNIGDRDVIEEFEIG HHCCCEEEECCHHHCCCHHHHCCCCHHHHHHHHHHHHHHHEEEEEEECCCHHHHHHCCCC KINIVNLSGLEIPQMVTFVGFIAKHLLLKRITYLKSLKDVYSINEEIRRVAQSNLNIIES EEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH HYKVVTKPVLLIVEEAHIFIPVNEQNSASLWLGKIAREGRKFGVGLGLVSQRPKQLHPDV HHHHHHCCEEEEEEECEEEEEECCCCCCHHHHHHHHHCCCCEEEEECHHCCCCCCCCCHH LSQTNTKIILKIVEPEDQKYIQRASEELGEDLVKDLASLGIGEAVIVGAAISLPSIVKID HCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHEEEHHHCCCCEEEEE KFDGVYGGKDINIVGEWMGLDDW CCCCCCCCCCEEEEEEECCCCCC >Mature Secondary Structure MYVMKVVGKTTTTHFTFESLEKIRFGEYVIAKNVDGRDVLGVIKNVVADVEKFVGEVKVI CEEEEEECCCCEEEEEHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCEEEE GVLDGNKIIPNRTPILPNSEVRLCDDEILNNIYLTPDGLNIGHLLTRDNVRVYLDTNKLV EEECCCEECCCCCCCCCCCCCEECCHHHHCCEEECCCCCCCCEEEECCCEEEEEECHHHH SRHFAILSITGGGKSNTASVLCRELAKKNGTVIMIDPHGEYISLYHEDMEGKIKVINPII HCCEEEEEEECCCCCCHHHHHHHHHHHCCCCEEEECCCCCEEEEEECCCCCCEEEECHHC NPVLLAPSEFANLIGIGDNEIEKRVYVEFAYHTVKHECPDAKGIEFIEKIENLLYEWSKI CCEEECCHHHHHEECCCCCHHHHEEEEEEHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH ASVGWEIKYYNPLRRNYDRRKLEKEDFVILMSLIDTISKFKLDYALNIGDRDVIEEFEIG HHCCCEEEECCHHHCCCHHHHCCCCHHHHHHHHHHHHHHHEEEEEEECCCHHHHHHCCCC KINIVNLSGLEIPQMVTFVGFIAKHLLLKRITYLKSLKDVYSINEEIRRVAQSNLNIIES EEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH HYKVVTKPVLLIVEEAHIFIPVNEQNSASLWLGKIAREGRKFGVGLGLVSQRPKQLHPDV HHHHHHCCEEEEEEECEEEEEECCCCCCHHHHHHHHHCCCCEEEEECHHCCCCCCCCCHH LSQTNTKIILKIVEPEDQKYIQRASEELGEDLVKDLASLGIGEAVIVGAAISLPSIVKID HCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHEEEHHHCCCCEEEEE KFDGVYGGKDINIVGEWMGLDDW CCCCCCCCCCEEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087