Definition Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome.
Accession NC_000909
Length 1,664,970

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The map label for this gene is 15669587

Identifier: 15669587

GI number: 15669587

Start: 1356443

End: 1357903

Strand: Direct

Name: 15669587

Synonym: MJ1397

Alternate gene names: NA

Gene position: 1356443-1357903 (Clockwise)

Preceding gene: 15669586

Following gene: 15669588

Centisome position: 81.47

GC content: 28.61

Gene sequence:

>1461_bases
TTGGGGACCATGAGATCGGTATATTTAATTATTATTATTATACTATTTTTTGCATTTATTTCTTTAAGTTTTGGGGAAAT
ATATGAGTATAGGGGGGTTGTATTTTATCCAAATGGTTCTCAAACAGTTGATGTATCTAAGTTACATATAGATTATGAAA
ATCCCGATGCTTTTAGCATCTATATATCTTATAGAAACTCCTCCTTTTATCTTCCATATTCAAAAAATATAACTCTTAAT
CTCCCCCCAAAAAAATTTAACATATCCATAACTATATCTGCAAGTAGAATCAGCAGAGATGAATGGAGGGTATATTATAA
AATAATCAATAACTATCCCTACAGTATCTTATTTAACATATCTTTTCCAGGAGGATTTAACATTAAAAATGCATCAGTCT
TAGTTCCTGCCAAGTCCTATAAAATAATAACTTTATCAAAAATACAAAATTCAAATATTTTATATTTCGGAGATAGCAAT
ATAAGTTTTGAAGTACCCGCTAAATTGATGATAAGATATTCTCTGCCAATACCATTTTCCATAATAAAGTCAAATAAAAT
TTTAAGTAATGGTTCTATTGAATGGACAGCTATTTATATAATAAAAAATGATAAGAATGTCTCTTTAAATGTAAATGCAA
GCTATTGGGCTGTTGTTAATAATACAAAAATAGATTTTGGTAATTATTCCTATATTATAGAACCTAATGAGAATGTATCA
CAGTCATTTAATATCACTTCAGATTATGTTCCTATTTTTTATCTTAAATTTTATGCATGGCGAGATGTTTATGAAACTAT
AAAAATAAAACCAGCAATTAAGGTTGATAATTCATACATTATTGGAATAGGAAAAGTTGAAGGTTTAAGTTTTAACATTC
CATATTATAACTATATGGAAAGAGAAATAAAAAAGAAAAAAGAAGAAAAGGAAAACGAAGAGTCATCTAAAACTATAAAC
CAAATGCAGAGACATAAAAAAGAAGAGAAGTCACAGACTCAGGAGACAAAAAAACCTTCTAAAAATGAGATGAATAAACA
AGAGAAAGAAAGAAAGTACCCACTAATAATTGAAGAAAAATTTAAAAAAGTAGCTGCTGCTATAGCCACAGTTACAACTA
CTTCAATAACTGCTATGTTGATTCCTCCAATATTTAGGAGACGTTCATATATTGTTGATAAAGGGATTTTCTCAATTAAA
GACCTTGAACTACTAAGTGGCACAGTATATGTTCCAGAGGGTTGTAAGTTAGGAAATATATTACCTGGAGGTATAACTAT
TATTAAACTTACTGATGTAGAAAAAGACCTTGCAAGGGACTTACATGAAATTTATGATATTCCTCTAAATTCAGCAAAAG
CCATTATACTGGGTGTTAAGTATGGAGGTAGAGTATTTTTAAGTGATAAAAAGGCGTATGATGTGGCAGTTGAAATAGGA
CTTGAAGCATATCTTTTTTAA

Upstream 100 bases:

>100_bases
CAACAGTTGAGGGACTTATTATCGGTATTGACCCAAAAAAATAATTCGTCAAAAAATTGTTCTATAAATCTTAAATACTT
TAAAAAATAAAACCTAATAA

Downstream 100 bases:

>100_bases
ATAGAGGTGAAGTATGTGGTAGAAGAAAACAATAAAGAAATATTAATAAAATTGAAGAAAATTAGAAAAATGCAAAGGAG
AAGAACGCTCATTGGTTCAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 486; Mature: 485

Protein sequence:

>486_residues
MGTMRSVYLIIIIILFFAFISLSFGEIYEYRGVVFYPNGSQTVDVSKLHIDYENPDAFSIYISYRNSSFYLPYSKNITLN
LPPKKFNISITISASRISRDEWRVYYKIINNYPYSILFNISFPGGFNIKNASVLVPAKSYKIITLSKIQNSNILYFGDSN
ISFEVPAKLMIRYSLPIPFSIIKSNKILSNGSIEWTAIYIIKNDKNVSLNVNASYWAVVNNTKIDFGNYSYIIEPNENVS
QSFNITSDYVPIFYLKFYAWRDVYETIKIKPAIKVDNSYIIGIGKVEGLSFNIPYYNYMEREIKKKKEEKENEESSKTIN
QMQRHKKEEKSQTQETKKPSKNEMNKQEKERKYPLIIEEKFKKVAAAIATVTTTSITAMLIPPIFRRRSYIVDKGIFSIK
DLELLSGTVYVPEGCKLGNILPGGITIIKLTDVEKDLARDLHEIYDIPLNSAKAIILGVKYGGRVFLSDKKAYDVAVEIG
LEAYLF

Sequences:

>Translated_486_residues
MGTMRSVYLIIIIILFFAFISLSFGEIYEYRGVVFYPNGSQTVDVSKLHIDYENPDAFSIYISYRNSSFYLPYSKNITLN
LPPKKFNISITISASRISRDEWRVYYKIINNYPYSILFNISFPGGFNIKNASVLVPAKSYKIITLSKIQNSNILYFGDSN
ISFEVPAKLMIRYSLPIPFSIIKSNKILSNGSIEWTAIYIIKNDKNVSLNVNASYWAVVNNTKIDFGNYSYIIEPNENVS
QSFNITSDYVPIFYLKFYAWRDVYETIKIKPAIKVDNSYIIGIGKVEGLSFNIPYYNYMEREIKKKKEEKENEESSKTIN
QMQRHKKEEKSQTQETKKPSKNEMNKQEKERKYPLIIEEKFKKVAAAIATVTTTSITAMLIPPIFRRRSYIVDKGIFSIK
DLELLSGTVYVPEGCKLGNILPGGITIIKLTDVEKDLARDLHEIYDIPLNSAKAIILGVKYGGRVFLSDKKAYDVAVEIG
LEAYLF
>Mature_485_residues
GTMRSVYLIIIIILFFAFISLSFGEIYEYRGVVFYPNGSQTVDVSKLHIDYENPDAFSIYISYRNSSFYLPYSKNITLNL
PPKKFNISITISASRISRDEWRVYYKIINNYPYSILFNISFPGGFNIKNASVLVPAKSYKIITLSKIQNSNILYFGDSNI
SFEVPAKLMIRYSLPIPFSIIKSNKILSNGSIEWTAIYIIKNDKNVSLNVNASYWAVVNNTKIDFGNYSYIIEPNENVSQ
SFNITSDYVPIFYLKFYAWRDVYETIKIKPAIKVDNSYIIGIGKVEGLSFNIPYYNYMEREIKKKKEEKENEESSKTINQ
MQRHKKEEKSQTQETKKPSKNEMNKQEKERKYPLIIEEKFKKVAAAIATVTTTSITAMLIPPIFRRRSYIVDKGIFSIKD
LELLSGTVYVPEGCKLGNILPGGITIIKLTDVEKDLARDLHEIYDIPLNSAKAIILGVKYGGRVFLSDKKAYDVAVEIGL
EAYLF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1397_METJA (Q58792)

Other databases:

- EMBL:   L77117
- PIR:   D64474
- RefSeq:   NP_248400.1
- ProteinModelPortal:   Q58792
- GeneID:   1452300
- GenomeReviews:   L77117_GR
- KEGG:   mja:MJ_1397
- NMPDR:   fig|243232.1.peg.1437
- TIGR:   MJ1397
- OMA:   IPLNSAK
- ProtClustDB:   CLSK796846
- BioCyc:   MJAN243232:MJ_1397-MONOMER

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 55817; Mature: 55686

Theoretical pI: Translated: 9.64; Mature: 9.64

Prosite motif: PS00189 LIPOYL

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGTMRSVYLIIIIILFFAFISLSFGEIYEYRGVVFYPNGSQTVDVSKLHIDYENPDAFSI
CCCHHHHHHHHHHHHHHHHHHCCHHHHHHHCCEEEECCCCCEEEEEEEEEECCCCCEEEE
YISYRNSSFYLPYSKNITLNLPPKKFNISITISASRISRDEWRVYYKIINNYPYSILFNI
EEEEECCEEEEEECCCEEEECCCCEEEEEEEEEHHHCCCCHHEEEEEEECCCCEEEEEEE
SFPGGFNIKNASVLVPAKSYKIITLSKIQNSNILYFGDSNISFEVPAKLMIRYSLPIPFS
ECCCCCCCCCCEEEEECCCEEEEEEEEECCCCEEEECCCCCEEECCEEEEEEEECCCCEE
IIKSNKILSNGSIEWTAIYIIKNDKNVSLNVNASYWAVVNNTKIDFGNYSYIIEPNENVS
EEECCEEECCCCEEEEEEEEEECCCEEEEEECCEEEEEEECCEEECCCEEEEECCCCCCC
QSFNITSDYVPIFYLKFYAWRDVYETIKIKPAIKVDNSYIIGIGKVEGLSFNIPYYNYME
CCCCCCCCCCCEEEEHHHHHHHHHHHEEECEEEEECCEEEEEEEEECCEEEECCCHHHHH
REIKKKKEEKENEESSKTINQMQRHKKEEKSQTQETKKPSKNEMNKQEKERKYPLIIEEK
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCHHHHHCCCCEEEHHH
FKKVAAAIATVTTTSITAMLIPPIFRRRSYIVDKGIFSIKDLELLSGTVYVPEGCKLGNI
HHHHHHHHHHHHHHHEEEEECCHHHHCCCEEEECCCCEEEEEHHHCCEEECCCCCCCCCC
LPGGITIIKLTDVEKDLARDLHEIYDIPLNSAKAIILGVKYGGRVFLSDKKAYDVAVEIG
CCCCEEEEEEECCHHHHHHHHHHHHCCCCCCCEEEEEEEEECCEEEEECCCCEEEEEEEC
LEAYLF
EEEEEC
>Mature Secondary Structure 
GTMRSVYLIIIIILFFAFISLSFGEIYEYRGVVFYPNGSQTVDVSKLHIDYENPDAFSI
CCHHHHHHHHHHHHHHHHHHCCHHHHHHHCCEEEECCCCCEEEEEEEEEECCCCCEEEE
YISYRNSSFYLPYSKNITLNLPPKKFNISITISASRISRDEWRVYYKIINNYPYSILFNI
EEEEECCEEEEEECCCEEEECCCCEEEEEEEEEHHHCCCCHHEEEEEEECCCCEEEEEEE
SFPGGFNIKNASVLVPAKSYKIITLSKIQNSNILYFGDSNISFEVPAKLMIRYSLPIPFS
ECCCCCCCCCCEEEEECCCEEEEEEEEECCCCEEEECCCCCEEECCEEEEEEEECCCCEE
IIKSNKILSNGSIEWTAIYIIKNDKNVSLNVNASYWAVVNNTKIDFGNYSYIIEPNENVS
EEECCEEECCCCEEEEEEEEEECCCEEEEEECCEEEEEEECCEEECCCEEEEECCCCCCC
QSFNITSDYVPIFYLKFYAWRDVYETIKIKPAIKVDNSYIIGIGKVEGLSFNIPYYNYME
CCCCCCCCCCCEEEEHHHHHHHHHHHEEECEEEEECCEEEEEEEEECCEEEECCCHHHHH
REIKKKKEEKENEESSKTINQMQRHKKEEKSQTQETKKPSKNEMNKQEKERKYPLIIEEK
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCHHHHHCCCCEEEHHH
FKKVAAAIATVTTTSITAMLIPPIFRRRSYIVDKGIFSIKDLELLSGTVYVPEGCKLGNI
HHHHHHHHHHHHHHHEEEEECCHHHHCCCEEEECCCCEEEEEHHHCCEEECCCCCCCCCC
LPGGITIIKLTDVEKDLARDLHEIYDIPLNSAKAIILGVKYGGRVFLSDKKAYDVAVEIG
CCCCEEEEEEECCHHHHHHHHHHHHCCCCCCCEEEEEEEEECCEEEEECCCCEEEEEEEC
LEAYLF
EEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087