| Definition | Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome. |
|---|---|
| Accession | NC_000909 |
| Length | 1,664,970 |
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The map label for this gene is 15669583
Identifier: 15669583
GI number: 15669583
Start: 1341974
End: 1343800
Strand: Direct
Name: 15669583
Synonym: MJ1393
Alternate gene names: NA
Gene position: 1341974-1343800 (Clockwise)
Preceding gene: 15669582
Following gene: 15669584
Centisome position: 80.6
GC content: 35.19
Gene sequence:
>1827_bases ATGAGAAAGTTAATATTTATGGCCTTGTTAATGTCATTGCTGTTTATTGGGACTGTATTTGGATATGGAGATAATGGACC ACTATATGTGGCATATTACGAAAAATATAACATAACAGGTAACACTACAGGTGATGGCTTAGTATCTTCAACAATAGAAA GTATAACTGGATATATTGTAATTAACAACACTGGGACTACAATAAATGATACTTTATACGATGTTTGGGTGGCAGTTAAT ATATCCAACAACATAACTGGACCAGAAGTTTATGTAAATGGAACTCCAAAAGGGGTTTTTATTGAGAGTTCAGCTCCTGC ATATACAAACTTACCAAATGCAAACACATACATACACATCCCAATACTACCAAATAACAGCTATGTTATAATTAAATTTG CTATAGATAAATCAATAACTGGAGTTCCATTGATAATCAACGAAACATATAGTGATACTAAAATTCCATCAGAAAGATTA TCAAATTGGAGTGTCTATTTAAACATAAGCAGAAATGTTTCAGCACTACCGGCAACAGATACACCAGTTTCTGTTATTAT GACAAAATATCTAAGTAACGACCCAAATAATTATGGAAGTGACACTTGGAATTTCTTAAATATAACAGGTGCTATAGCCA ACGAAGGTTCAATAACACTCTGGGATGGTCCTTACTTCTTACCAGGATACAACGATTCATTAACCTGGACAGGAGTCGTA ATAAATACTACTAAAAATGCAACCATTACAATCAACATAACAGGAAACAACACTTACACAAATAGAACAGGAACCTTAAT GAAATATGGTTTTGCTGTTATCTTCTTTGAATTCAATGGAACTAAATCAGGAACAAAAATTGAAGGGATTTATGCAACAG GATATGGTGGAGTAAGTGCAACCAAGGAAGGACCATTCTTAAATGCATCAAGCGGTAAGTATGAAATATGGTACGAAAGT GCTAATGTATCAAACAAGGCATCAAGTTACTACTTTAACTTAACTCATGTGACAATATGGGCTGTAAATGGTAGTAATCC AGTAATATTAGACCCATTTAATATAACATTATTAATCCCTAATTCAAAACAGACGTCCTCACCTAATGAAATATTATCTC CAGGAAGCGTTTGGAGTTCAACTAAATATGCCTTCACATTTGATGGAATTCCAGTTGTCTGGGCAAACTGTACATTTAAG GTAGCAGACGAGAACATAACATTAATAAATAGAAGTATTAATGAATACTCAACAAAGTACGGAAGTTCCTATGTTGTTGT TGAGGAGATTTATGTTGTGGGTAGTTATTTGATTAAGGTGACTAAGCATATTGTTCCGGATGCGGATGGGACTTATGATA TTTATATAGTTGTGGAGAATATTGGTAGTGTGAAGACTCCTGAGTATGTGTATGTTTATGATTTGATTCCTAAGAACTTC ACCGTCTCAGATGAGTGGGTTAATCAATCAAGTATGTTGATTGCTGAAGGAAATCACACCATTACAACAAATCCAAGGTA TAATTTAAGCATGTGGTGGGCGTTACATGCAATATATCCAGGAGCAGATGGGGACGGTAACTGGAACGACACTGCTGAAA TACTTGCAAATAAAACAGTAGTCATACACTACAAACTAAACGGAACTGGCGAATTCTACCCAAGCGACGCATTTATCGTT GGTATCGACCCTACAAACTCACTACTACCAACAACCTCACCAAAAATAACAACAGTAGCCGGAACAGTAGAAAACAACTC AGAACCATTCCTTGCATTATTGACCCTACTTGTAGGGTTGGGAATCATAATAAGAAGGGTAATGTAA
Upstream 100 bases:
>100_bases AAAATGTTCCATAAATTATTTATACAAACGGAAGACATTACATTATTACTACCTACTTAAGAATGTTCCCCTATTTCACA CAAATGCATGAGGTGAAGTT
Downstream 100 bases:
>100_bases AACTAATTTTCTTTATTTTTTATAATTCTTTTTCTAAATTCAAATATGATTTTTGACATTAAGTTAATTTTATCGATATT ATATGGGTGATGTGGGGCAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 608; Mature: 608
Protein sequence:
>608_residues MRKLIFMALLMSLLFIGTVFGYGDNGPLYVAYYEKYNITGNTTGDGLVSSTIESITGYIVINNTGTTINDTLYDVWVAVN ISNNITGPEVYVNGTPKGVFIESSAPAYTNLPNANTYIHIPILPNNSYVIIKFAIDKSITGVPLIINETYSDTKIPSERL SNWSVYLNISRNVSALPATDTPVSVIMTKYLSNDPNNYGSDTWNFLNITGAIANEGSITLWDGPYFLPGYNDSLTWTGVV INTTKNATITINITGNNTYTNRTGTLMKYGFAVIFFEFNGTKSGTKIEGIYATGYGGVSATKEGPFLNASSGKYEIWYES ANVSNKASSYYFNLTHVTIWAVNGSNPVILDPFNITLLIPNSKQTSSPNEILSPGSVWSSTKYAFTFDGIPVVWANCTFK VADENITLINRSINEYSTKYGSSYVVVEEIYVVGSYLIKVTKHIVPDADGTYDIYIVVENIGSVKTPEYVYVYDLIPKNF TVSDEWVNQSSMLIAEGNHTITTNPRYNLSMWWALHAIYPGADGDGNWNDTAEILANKTVVIHYKLNGTGEFYPSDAFIV GIDPTNSLLPTTSPKITTVAGTVENNSEPFLALLTLLVGLGIIIRRVM
Sequences:
>Translated_608_residues MRKLIFMALLMSLLFIGTVFGYGDNGPLYVAYYEKYNITGNTTGDGLVSSTIESITGYIVINNTGTTINDTLYDVWVAVN ISNNITGPEVYVNGTPKGVFIESSAPAYTNLPNANTYIHIPILPNNSYVIIKFAIDKSITGVPLIINETYSDTKIPSERL SNWSVYLNISRNVSALPATDTPVSVIMTKYLSNDPNNYGSDTWNFLNITGAIANEGSITLWDGPYFLPGYNDSLTWTGVV INTTKNATITINITGNNTYTNRTGTLMKYGFAVIFFEFNGTKSGTKIEGIYATGYGGVSATKEGPFLNASSGKYEIWYES ANVSNKASSYYFNLTHVTIWAVNGSNPVILDPFNITLLIPNSKQTSSPNEILSPGSVWSSTKYAFTFDGIPVVWANCTFK VADENITLINRSINEYSTKYGSSYVVVEEIYVVGSYLIKVTKHIVPDADGTYDIYIVVENIGSVKTPEYVYVYDLIPKNF TVSDEWVNQSSMLIAEGNHTITTNPRYNLSMWWALHAIYPGADGDGNWNDTAEILANKTVVIHYKLNGTGEFYPSDAFIV GIDPTNSLLPTTSPKITTVAGTVENNSEPFLALLTLLVGLGIIIRRVM >Mature_608_residues MRKLIFMALLMSLLFIGTVFGYGDNGPLYVAYYEKYNITGNTTGDGLVSSTIESITGYIVINNTGTTINDTLYDVWVAVN ISNNITGPEVYVNGTPKGVFIESSAPAYTNLPNANTYIHIPILPNNSYVIIKFAIDKSITGVPLIINETYSDTKIPSERL SNWSVYLNISRNVSALPATDTPVSVIMTKYLSNDPNNYGSDTWNFLNITGAIANEGSITLWDGPYFLPGYNDSLTWTGVV INTTKNATITINITGNNTYTNRTGTLMKYGFAVIFFEFNGTKSGTKIEGIYATGYGGVSATKEGPFLNASSGKYEIWYES ANVSNKASSYYFNLTHVTIWAVNGSNPVILDPFNITLLIPNSKQTSSPNEILSPGSVWSSTKYAFTFDGIPVVWANCTFK VADENITLINRSINEYSTKYGSSYVVVEEIYVVGSYLIKVTKHIVPDADGTYDIYIVVENIGSVKTPEYVYVYDLIPKNF TVSDEWVNQSSMLIAEGNHTITTNPRYNLSMWWALHAIYPGADGDGNWNDTAEILANKTVVIHYKLNGTGEFYPSDAFIV GIDPTNSLLPTTSPKITTVAGTVENNSEPFLALLTLLVGLGIIIRRVM
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Membrane; Single-pass membrane protein (Potential)
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.jannaschii MJ1394 and A.fulgidus AF2028
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y1393_METJA (Q58788)
Other databases:
- EMBL: L77117 - PIR: H64473 - RefSeq: NP_248396.1 - ProteinModelPortal: Q58788 - GeneID: 1452296 - GenomeReviews: L77117_GR - KEGG: mja:MJ_1393 - NMPDR: fig|243232.1.peg.1433 - TIGR: MJ1393 - HOGENOM: HBG540938 - OMA: WVAVNIS - ProtClustDB: CLSK782741 - BioCyc: MJAN243232:MJ_1393-MONOMER
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 66769; Mature: 66769
Theoretical pI: Translated: 4.60; Mature: 4.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0xdd86790)-;
Cys/Met content:
0.2 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKLIFMALLMSLLFIGTVFGYGDNGPLYVAYYEKYNITGNTTGDGLVSSTIESITGYIV CCHHHHHHHHHHHHHHHHHEECCCCCCEEEEEEEEEEECCCCCCCCHHHHHHHHCEEEEE INNTGTTINDTLYDVWVAVNISNNITGPEVYVNGTPKGVFIESSAPAYTNLPNANTYIHI ECCCCCEECCEEEEEEEEEEECCCCCCCEEEECCCCCEEEEECCCCCCCCCCCCCCEEEE PILPNNSYVIIKFAIDKSITGVPLIINETYSDTKIPSERLSNWSVYLNISRNVSALPATD EEECCCCEEEEEEEECCCCCCEEEEEECCCCCCCCCHHHCCCEEEEEEECCCCEECCCCC TPVSVIMTKYLSNDPNNYGSDTWNFLNITGAIANEGSITLWDGPYFLPGYNDSLTWTGVV CCHHHHHHHHHCCCCCCCCCCCEEEEEEEEEEECCCCEEEECCCEECCCCCCCEEEEEEE INTTKNATITINITGNNTYTNRTGTLMKYGFAVIFFEFNGTKSGTKIEGIYATGYGGVSA EECCCCEEEEEEEECCCEEECCCCCEEEEEEEEEEEEECCCCCCCEEEEEEEECCCCCCC TKEGPFLNASSGKYEIWYESANVSNKASSYYFNLTHVTIWAVNGSNPVILDPFNITLLIP CCCCCEEECCCCEEEEEEECCCCCCCCCEEEEEEEEEEEEEECCCCCEEECCCEEEEEEE NSKQTSSPNEILSPGSVWSSTKYAFTFDGIPVVWANCTFKVADENITLINRSINEYSTKY CCCCCCCCHHHCCCCCCCCCCEEEEEECCCEEEEEEEEEEEECCCEEEEECCHHHHHHHC GSSYVVVEEIYVVGSYLIKVTKHIVPDADGTYDIYIVVENIGSVKTPEYVYVYDLIPKNF CCEEEEEEHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCCCEEEEEEECCCCE TVSDEWVNQSSMLIAEGNHTITTNPRYNLSMWWALHAIYPGADGDGNWNDTAEILANKTV EECHHHCCCCEEEEECCCEEEECCCCCCEEEEEEEEEEECCCCCCCCCCCHHHHHCCCEE VIHYKLNGTGEFYPSDAFIVGIDPTNSLLPTTSPKITTVAGTVENNSEPFLALLTLLVGL EEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHH GIIIRRVM HHHHHHCH >Mature Secondary Structure MRKLIFMALLMSLLFIGTVFGYGDNGPLYVAYYEKYNITGNTTGDGLVSSTIESITGYIV CCHHHHHHHHHHHHHHHHHEECCCCCCEEEEEEEEEEECCCCCCCCHHHHHHHHCEEEEE INNTGTTINDTLYDVWVAVNISNNITGPEVYVNGTPKGVFIESSAPAYTNLPNANTYIHI ECCCCCEECCEEEEEEEEEEECCCCCCCEEEECCCCCEEEEECCCCCCCCCCCCCCEEEE PILPNNSYVIIKFAIDKSITGVPLIINETYSDTKIPSERLSNWSVYLNISRNVSALPATD EEECCCCEEEEEEEECCCCCCEEEEEECCCCCCCCCHHHCCCEEEEEEECCCCEECCCCC TPVSVIMTKYLSNDPNNYGSDTWNFLNITGAIANEGSITLWDGPYFLPGYNDSLTWTGVV CCHHHHHHHHHCCCCCCCCCCCEEEEEEEEEEECCCCEEEECCCEECCCCCCCEEEEEEE INTTKNATITINITGNNTYTNRTGTLMKYGFAVIFFEFNGTKSGTKIEGIYATGYGGVSA EECCCCEEEEEEEECCCEEECCCCCEEEEEEEEEEEEECCCCCCCEEEEEEEECCCCCCC TKEGPFLNASSGKYEIWYESANVSNKASSYYFNLTHVTIWAVNGSNPVILDPFNITLLIP CCCCCEEECCCCEEEEEEECCCCCCCCCEEEEEEEEEEEEEECCCCCEEECCCEEEEEEE NSKQTSSPNEILSPGSVWSSTKYAFTFDGIPVVWANCTFKVADENITLINRSINEYSTKY CCCCCCCCHHHCCCCCCCCCCEEEEEECCCEEEEEEEEEEEECCCEEEEECCHHHHHHHC GSSYVVVEEIYVVGSYLIKVTKHIVPDADGTYDIYIVVENIGSVKTPEYVYVYDLIPKNF CCEEEEEEHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCCCEEEEEEECCCCE TVSDEWVNQSSMLIAEGNHTITTNPRYNLSMWWALHAIYPGADGDGNWNDTAEILANKTV EECHHHCCCCEEEEECCCEEEECCCCCCEEEEEEEEEEECCCCCCCCCCCHHHHHCCCEE VIHYKLNGTGEFYPSDAFIVGIDPTNSLLPTTSPKITTVAGTVENNSEPFLALLTLLVGL EEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHH GIIIRRVM HHHHHHCH
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8688087