Definition Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome.
Accession NC_000909
Length 1,664,970

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The map label for this gene is 15669511

Identifier: 15669511

GI number: 15669511

Start: 1268210

End: 1270351

Strand: Reverse

Name: 15669511

Synonym: MJ1321

Alternate gene names: NA

Gene position: 1270351-1268210 (Counterclockwise)

Preceding gene: 15669512

Following gene: 15669510

Centisome position: 76.3

GC content: 25.91

Gene sequence:

>2142_bases
ATGGTTTTAAATAAAGTTACATATAAAATAAATGCATACAAAATAAAAGAAGAATTTATTCCTAAAGAAGTGCATTTCTA
TAGAATTAAAAGTTTTGTTAATGAAGCATTTAATTTTTATAGATTTGTTAATTTTTATGGTGGCATGATAATTAATAAAA
AAGATAAAAGTTTTGTTTTACCATACAAAGTTGATAATAAAGTATTGAAATACAAAGATGGAAATAACGAAATCCCAATA
GACATTGAATATATTAAATCATTAAAATTAGAATATGTAAAACCAGAAATAGCTGAAAAACTTGTTAGGGGATATCTTAA
ATCTGTCCATAAAATAGAGCCAGAATTATCAAGAATTATAAAAAACATTAGAAAACACAAAGTAGTGGAAAATATAAAAG
TTGAGTCATATTGTGAGTATGAAGTTAAAAAACATGATGGGGATTATTATCTTATATTAAACTTTAGACATACAGCGTCT
ATTACAAAACACTTATGGGATTTTGTTAATAGAGATAAAGCACTATTAGAGGAGTATGTTGGGAAAAAGATTATCTTTAA
ACCTAATCCAAAGGTAAGATATACAATTTCACTGGTTGATGCTCCAAACCCTCAAAAAATAGAGGAAATAATGAGTCACA
TAATTAAATATTACAAATGGTCTGAAGATATGGTAAAATCTACTTTTGGGGAGATTGATTATAATCAACCCATTATGTAT
TGTGAAGAAATCTTAGAACCATTTGCTCCACAATTTTGTAATCTTGTATTTTATATGGATGAATTAGATAGCTATATTCT
TAAAGAATTGCAGAGTTATTGGAGATTATCTAATGAAAATAAGGGAAAAATTATAAATGAAATAGCAAAAAAACTTAGAT
TTATAGATAATACACCTAAAGAATTAGAATTTATGAAATTTAATAATACTCCATTGCTCGTGAAGGATGTAAATAAAAAT
CCTACCAAAATATATTCAACAAATACATTATTTACGTGGATTTACAATCAAAATGCAAAAATATATCTCCCATATGATGT
CCCAGAAATTATAAGGAACAAAAATTTATTAACATACATACTTATTGATGAGGAAATCAAGGATGAATTAAAAGCTATTA
AAGATAAAGTAAATAAAATGTTTAGAAACTATAACAAAATTGCTAATAAAACAGAATTGCCAAAATTCAATTATGCCAAT
AGATGGAAATATTTTTCTACAGATGACATTAGGGGAATTATAAAAGAAATAAAATCTGAATTTAATGATGAAATATGTTT
TGCGTTAATTATTGGAAAAGAAAAATACAAAGATAATGATTATTATGAAATTTTGAAAAAACAACTTTTTGATTTAAAAA
TAATCTCTCAAAATATATTATGGGAAAATTGGAGGAAAGATGACAAAGGATATATGACTAATAATTTACTTATACAAATT
ATGGGAAAATTGGGGATTAAATATTTTATCTTAGATTCTAAGACACCTTATGATTACATAATGGGACTTGACACTGGATT
GGGAATTTTTGGTAATCATAGAGTTGGAGGTTGCACTGTGGTATATGACTCAGAAGGTAAAATAAGAAGAATACAGCCAA
TAGAGACACCAGCTCCAGGAGAACGGTTACATCTGCCGTATGTAATAGAATATTTAGAAAATAAAGCAAACATTGATATG
GAAAATAAAAATATTCTATTCTTAAGAGATGGTTTTATTCAGAATTCTGAAAGAAATGACCTAAAAGAAATCTCTAAAGA
ACTAAATTCAAATATTGAAGTAATTAGCATTAGAAAAAACAATAAATATAAAGTTTTTACGTCTGATTATAGAATTGGAA
GTGTATTTGGAAATGATGGTATCTTCTTACCTCACAAAACTCCATTTGGTTCAAATCCTGTAAAATTATCAACTTGGTTA
AGGTTTAATTGTGGAAATGAAGAAGGGTTAAAAATTAATGAATCAATTATGCAATTGTTATATGATTTAACTAAAATGAA
CTATTCTGCACTATATGGAGAAGGTAGATATCTTAGAATTCCAGCACCAATACATTATGCAGATAAATTTGTTAAAGCAC
TTGGTAAAAATTGGAAAATAGATGAAGAACTGCTAAAGCATGGATTCTTATATTTCATATAA

Upstream 100 bases:

>100_bases
CAGAGAGCTTGAAGATGTAGCAGATGTGATAATCAATGTTAAAAAAGATGGGAATGTTTCAAAAGTTAAGATTAATGGAT
AGTTATGAGGAGGATATAAT

Downstream 100 bases:

>100_bases
AAAAGAGGTGAATCTAAGATATGTATAAAATAGTTCCAGATACCAACTTTTTAATTTACGTTTTTAAGCATAAGATAAAC
TTTGATTATGAGATAGAGAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 713; Mature: 713

Protein sequence:

>713_residues
MVLNKVTYKINAYKIKEEFIPKEVHFYRIKSFVNEAFNFYRFVNFYGGMIINKKDKSFVLPYKVDNKVLKYKDGNNEIPI
DIEYIKSLKLEYVKPEIAEKLVRGYLKSVHKIEPELSRIIKNIRKHKVVENIKVESYCEYEVKKHDGDYYLILNFRHTAS
ITKHLWDFVNRDKALLEEYVGKKIIFKPNPKVRYTISLVDAPNPQKIEEIMSHIIKYYKWSEDMVKSTFGEIDYNQPIMY
CEEILEPFAPQFCNLVFYMDELDSYILKELQSYWRLSNENKGKIINEIAKKLRFIDNTPKELEFMKFNNTPLLVKDVNKN
PTKIYSTNTLFTWIYNQNAKIYLPYDVPEIIRNKNLLTYILIDEEIKDELKAIKDKVNKMFRNYNKIANKTELPKFNYAN
RWKYFSTDDIRGIIKEIKSEFNDEICFALIIGKEKYKDNDYYEILKKQLFDLKIISQNILWENWRKDDKGYMTNNLLIQI
MGKLGIKYFILDSKTPYDYIMGLDTGLGIFGNHRVGGCTVVYDSEGKIRRIQPIETPAPGERLHLPYVIEYLENKANIDM
ENKNILFLRDGFIQNSERNDLKEISKELNSNIEVISIRKNNKYKVFTSDYRIGSVFGNDGIFLPHKTPFGSNPVKLSTWL
RFNCGNEEGLKINESIMQLLYDLTKMNYSALYGEGRYLRIPAPIHYADKFVKALGKNWKIDEELLKHGFLYFI

Sequences:

>Translated_713_residues
MVLNKVTYKINAYKIKEEFIPKEVHFYRIKSFVNEAFNFYRFVNFYGGMIINKKDKSFVLPYKVDNKVLKYKDGNNEIPI
DIEYIKSLKLEYVKPEIAEKLVRGYLKSVHKIEPELSRIIKNIRKHKVVENIKVESYCEYEVKKHDGDYYLILNFRHTAS
ITKHLWDFVNRDKALLEEYVGKKIIFKPNPKVRYTISLVDAPNPQKIEEIMSHIIKYYKWSEDMVKSTFGEIDYNQPIMY
CEEILEPFAPQFCNLVFYMDELDSYILKELQSYWRLSNENKGKIINEIAKKLRFIDNTPKELEFMKFNNTPLLVKDVNKN
PTKIYSTNTLFTWIYNQNAKIYLPYDVPEIIRNKNLLTYILIDEEIKDELKAIKDKVNKMFRNYNKIANKTELPKFNYAN
RWKYFSTDDIRGIIKEIKSEFNDEICFALIIGKEKYKDNDYYEILKKQLFDLKIISQNILWENWRKDDKGYMTNNLLIQI
MGKLGIKYFILDSKTPYDYIMGLDTGLGIFGNHRVGGCTVVYDSEGKIRRIQPIETPAPGERLHLPYVIEYLENKANIDM
ENKNILFLRDGFIQNSERNDLKEISKELNSNIEVISIRKNNKYKVFTSDYRIGSVFGNDGIFLPHKTPFGSNPVKLSTWL
RFNCGNEEGLKINESIMQLLYDLTKMNYSALYGEGRYLRIPAPIHYADKFVKALGKNWKIDEELLKHGFLYFI
>Mature_713_residues
MVLNKVTYKINAYKIKEEFIPKEVHFYRIKSFVNEAFNFYRFVNFYGGMIINKKDKSFVLPYKVDNKVLKYKDGNNEIPI
DIEYIKSLKLEYVKPEIAEKLVRGYLKSVHKIEPELSRIIKNIRKHKVVENIKVESYCEYEVKKHDGDYYLILNFRHTAS
ITKHLWDFVNRDKALLEEYVGKKIIFKPNPKVRYTISLVDAPNPQKIEEIMSHIIKYYKWSEDMVKSTFGEIDYNQPIMY
CEEILEPFAPQFCNLVFYMDELDSYILKELQSYWRLSNENKGKIINEIAKKLRFIDNTPKELEFMKFNNTPLLVKDVNKN
PTKIYSTNTLFTWIYNQNAKIYLPYDVPEIIRNKNLLTYILIDEEIKDELKAIKDKVNKMFRNYNKIANKTELPKFNYAN
RWKYFSTDDIRGIIKEIKSEFNDEICFALIIGKEKYKDNDYYEILKKQLFDLKIISQNILWENWRKDDKGYMTNNLLIQI
MGKLGIKYFILDSKTPYDYIMGLDTGLGIFGNHRVGGCTVVYDSEGKIRRIQPIETPAPGERLHLPYVIEYLENKANIDM
ENKNILFLRDGFIQNSERNDLKEISKELNSNIEVISIRKNNKYKVFTSDYRIGSVFGNDGIFLPHKTPFGSNPVKLSTWL
RFNCGNEEGLKINESIMQLLYDLTKMNYSALYGEGRYLRIPAPIHYADKFVKALGKNWKIDEELLKHGFLYFI

Specific function: Unknown

COG id: COG1431

COG function: function code J; Uncharacterized protein containing piwi/argonaute domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Piwi domain

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1321_METJA (Q58717)

Other databases:

- EMBL:   L77117
- PIR:   H64464
- RefSeq:   NP_248321.1
- ProteinModelPortal:   Q58717
- SMR:   Q58717
- GeneID:   1452223
- GenomeReviews:   L77117_GR
- KEGG:   mja:MJ_1321
- NMPDR:   fig|243232.1.peg.1358
- TIGR:   MJ1321
- OMA:   KINESIM
- ProtClustDB:   CLSK214007
- BioCyc:   MJAN243232:MJ_1321-MONOMER
- InterPro:   IPR003100
- InterPro:   IPR003165
- InterPro:   IPR012337
- SMART:   SM00950

Pfam domain/function: PF02171 Piwi; SSF53098 RNaseH_fold; SSF101690 SSF101690

EC number: NA

Molecular weight: Translated: 84584; Mature: 84584

Theoretical pI: Translated: 9.33; Mature: 9.33

Prosite motif: PS50822 PIWI

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVLNKVTYKINAYKIKEEFIPKEVHFYRIKSFVNEAFNFYRFVNFYGGMIINKKDKSFVL
CCCCEEEEEEEEEEEHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCEEE
PYKVDNKVLKYKDGNNEIPIDIEYIKSLKLEYVKPEIAEKLVRGYLKSVHKIEPELSRII
EEEECCCEEEEECCCCCCCEEHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHH
KNIRKHKVVENIKVESYCEYEVKKHDGDYYLILNFRHTASITKHLWDFVNRDKALLEEYV
HHHHHHHHHHHCCCCHHEEEEEEECCCCEEEEEEECHHHHHHHHHHHHHCCCHHHHHHHC
GKKIIFKPNPKVRYTISLVDAPNPQKIEEIMSHIIKYYKWSEDMVKSTFGEIDYNQPIMY
CCEEEECCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCHHH
CEEILEPFAPQFCNLVFYMDELDSYILKELQSYWRLSNENKGKIINEIAKKLRFIDNTPK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCC
ELEFMKFNNTPLLVKDVNKNPTKIYSTNTLFTWIYNQNAKIYLPYDVPEIIRNKNLLTYI
CEEEEEECCCEEEEEECCCCCCEEEECCEEEEEEEECCCEEEECCCCHHHHCCCCEEEEE
LIDEEIKDELKAIKDKVNKMFRNYNKIANKTELPKFNYANRWKYFSTDDIRGIIKEIKSE
EECHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
FNDEICFALIIGKEKYKDNDYYEILKKQLFDLKIISQNILWENWRKDDKGYMTNNLLIQI
CCCCEEEEEEEECHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH
MGKLGIKYFILDSKTPYDYIMGLDTGLGIFGNHRVGGCTVVYDSEGKIRRIQPIETPAPG
HHHCCEEEEEECCCCCHHHEEECCCCCCCCCCCCCCCEEEEECCCCCEEEECCCCCCCCC
ERLHLPYVIEYLENKANIDMENKNILFLRDGFIQNSERNDLKEISKELNSNIEVISIRKN
CEEECHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHCCCEEEEEEEEC
NKYKVFTSDYRIGSVFGNDGIFLPHKTPFGSNPVKLSTWLRFNCGNEEGLKINESIMQLL
CEEEEEECCEEEEEEECCCCEECCCCCCCCCCCEEEEEEEEEECCCCCCCEEHHHHHHHH
YDLTKMNYSALYGEGRYLRIPAPIHYADKFVKALGKNWKIDEELLKHGFLYFI
HHHHHCCCCEEECCCEEEEECCCHHHHHHHHHHHCCCCCCCHHHHHCCCEEEC
>Mature Secondary Structure
MVLNKVTYKINAYKIKEEFIPKEVHFYRIKSFVNEAFNFYRFVNFYGGMIINKKDKSFVL
CCCCEEEEEEEEEEEHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCEEE
PYKVDNKVLKYKDGNNEIPIDIEYIKSLKLEYVKPEIAEKLVRGYLKSVHKIEPELSRII
EEEECCCEEEEECCCCCCCEEHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHH
KNIRKHKVVENIKVESYCEYEVKKHDGDYYLILNFRHTASITKHLWDFVNRDKALLEEYV
HHHHHHHHHHHCCCCHHEEEEEEECCCCEEEEEEECHHHHHHHHHHHHHCCCHHHHHHHC
GKKIIFKPNPKVRYTISLVDAPNPQKIEEIMSHIIKYYKWSEDMVKSTFGEIDYNQPIMY
CCEEEECCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCHHH
CEEILEPFAPQFCNLVFYMDELDSYILKELQSYWRLSNENKGKIINEIAKKLRFIDNTPK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCC
ELEFMKFNNTPLLVKDVNKNPTKIYSTNTLFTWIYNQNAKIYLPYDVPEIIRNKNLLTYI
CEEEEEECCCEEEEEECCCCCCEEEECCEEEEEEEECCCEEEECCCCHHHHCCCCEEEEE
LIDEEIKDELKAIKDKVNKMFRNYNKIANKTELPKFNYANRWKYFSTDDIRGIIKEIKSE
EECHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
FNDEICFALIIGKEKYKDNDYYEILKKQLFDLKIISQNILWENWRKDDKGYMTNNLLIQI
CCCCEEEEEEEECHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH
MGKLGIKYFILDSKTPYDYIMGLDTGLGIFGNHRVGGCTVVYDSEGKIRRIQPIETPAPG
HHHCCEEEEEECCCCCHHHEEECCCCCCCCCCCCCCCEEEEECCCCCEEEECCCCCCCCC
ERLHLPYVIEYLENKANIDMENKNILFLRDGFIQNSERNDLKEISKELNSNIEVISIRKN
CEEECHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHCCCEEEEEEEEC
NKYKVFTSDYRIGSVFGNDGIFLPHKTPFGSNPVKLSTWLRFNCGNEEGLKINESIMQLL
CEEEEEECCEEEEEEECCCCEECCCCCCCCCCCEEEEEEEEEECCCCCCCEEHHHHHHHH
YDLTKMNYSALYGEGRYLRIPAPIHYADKFVKALGKNWKIDEELLKHGFLYFI
HHHHHCCCCEEECCCEEEEECCCHHHHHHHHHHHCCCCCCCHHHHHCCCEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087