| Definition | Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome. |
|---|---|
| Accession | NC_000909 |
| Length | 1,664,970 |
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The map label for this gene is 15669503
Identifier: 15669503
GI number: 15669503
Start: 1258383
End: 1259594
Strand: Direct
Name: 15669503
Synonym: MJ1313
Alternate gene names: NA
Gene position: 1258383-1259594 (Clockwise)
Preceding gene: 15669502
Following gene: 15669504
Centisome position: 75.58
GC content: 33.42
Gene sequence:
>1212_bases ATGTATCTAACTAAAGAAGAAGAGAAAATATTAGATGGAGAATATGGAGAGGTTTTAAGAAGATGTATGAATTTATTAGT TTCTTTGGGAGATATTTATGGAGCTGATAAGCTAATCCCTATAAGCTCAGCTCAAATTTCTGGAGTTTCATACAAAACTA TTAAAGATATTGGTTTAGAGTTTTTGGAAGATTTTGCTAAAGAAGATGTTAAAGTTAAGGTCTATGCCACTTTAAACCCA GCTGGAATGGATTTAGATATATGGAGAGAGCTTGGCATTGATGAGAAGTTTGCCAAAAAGCAGTTGAGAATTATTGAAGC ATTTAAAAAGATGGAAGTTGAGATAAGTTGCACTTGCACGCCCTATTTAACTGGAAACCTTCCAAGATTCGGAGAGCATA TAAGTTGGGCCGAAAGCTCAGCTGTGAGCTTTGCAAACTCTGTCTTAGGAGCTAAGACAAATAGAGAAGGTGGGCCATCA GCATTAGCAGCTGCAATTATTGGAAAAACACCATATTATGGATATCACTTAGATGAAAATAGAAAGACAACACATATCAT TGAGTTAGATGGACAATTAATCTCTAACTTTAAATATGGAGAGAGTTTTTATGGAGCTTTAGGTTACTTAGTTGGGAAGA TTGTTAAGAATGGCATTCCATATTTTGAAAATCTATATAAATTAAATCCAAATAACGATAATTTAAAATCCTTGGGAGCT GCAATGGCTGCAAGTGGTGGTATCGCCTTATATCACGCAAAAAACTTGACAGCTGAATGCAGAGTTAAAGAAGTTGTTAA TGATAAAATTGAAAAGATATCTATTGGAGTTGAGGAGATAAAGGAAGCTTATGAAAAATTAAATACAACAAATGAAGAGC CAGATTTAATTTGTATTGGTTGCCCTCACTGCAGTTTAATGGAAATTAAAAAAATTGCTGAACTTTTAAAAAATAAAAAA TTGAATGCTGATTTATGGGTTTGCTGCTCTCTTCATATTAAAGCAATAGCAGATAGAATGGGATATACAAAGATTATTGA AAAAGCTGGTGGAAAGGTAGTTAAAGACACCTGTATGGTTGTTTCTCCAATTGAGGATTTAGGTTATAAAAGAGTTGCAA CAAACTCTGGAAAAGCTGCTGTTTATCTACCAAGCTTTTGTAAGAGTGAAGTAATTTTTGGAGATATTGAGGAATTGTTA AAAGGGAGATAA
Upstream 100 bases:
>100_bases GCTTCGCCCTATTGGGATACCCAGAGCGGGGCTTCACTACATTCAGCCCTACTGTAATCTATTTTTAATCAGATTTTTAG TAAAAATTTGAGGGATAAAA
Downstream 100 bases:
>100_bases TGCTGAATCCAATAATCTTATTTTTGGCTATTATTTTTGATAGAATCATTGGGGAGTTGCCAGAGAGTATTCATCCAACG GTTTGGATAGGGAAGTTGAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 403; Mature: 403
Protein sequence:
>403_residues MYLTKEEEKILDGEYGEVLRRCMNLLVSLGDIYGADKLIPISSAQISGVSYKTIKDIGLEFLEDFAKEDVKVKVYATLNP AGMDLDIWRELGIDEKFAKKQLRIIEAFKKMEVEISCTCTPYLTGNLPRFGEHISWAESSAVSFANSVLGAKTNREGGPS ALAAAIIGKTPYYGYHLDENRKTTHIIELDGQLISNFKYGESFYGALGYLVGKIVKNGIPYFENLYKLNPNNDNLKSLGA AMAASGGIALYHAKNLTAECRVKEVVNDKIEKISIGVEEIKEAYEKLNTTNEEPDLICIGCPHCSLMEIKKIAELLKNKK LNADLWVCCSLHIKAIADRMGYTKIIEKAGGKVVKDTCMVVSPIEDLGYKRVATNSGKAAVYLPSFCKSEVIFGDIEELL KGR
Sequences:
>Translated_403_residues MYLTKEEEKILDGEYGEVLRRCMNLLVSLGDIYGADKLIPISSAQISGVSYKTIKDIGLEFLEDFAKEDVKVKVYATLNP AGMDLDIWRELGIDEKFAKKQLRIIEAFKKMEVEISCTCTPYLTGNLPRFGEHISWAESSAVSFANSVLGAKTNREGGPS ALAAAIIGKTPYYGYHLDENRKTTHIIELDGQLISNFKYGESFYGALGYLVGKIVKNGIPYFENLYKLNPNNDNLKSLGA AMAASGGIALYHAKNLTAECRVKEVVNDKIEKISIGVEEIKEAYEKLNTTNEEPDLICIGCPHCSLMEIKKIAELLKNKK LNADLWVCCSLHIKAIADRMGYTKIIEKAGGKVVKDTCMVVSPIEDLGYKRVATNSGKAAVYLPSFCKSEVIFGDIEELL KGR >Mature_403_residues MYLTKEEEKILDGEYGEVLRRCMNLLVSLGDIYGADKLIPISSAQISGVSYKTIKDIGLEFLEDFAKEDVKVKVYATLNP AGMDLDIWRELGIDEKFAKKQLRIIEAFKKMEVEISCTCTPYLTGNLPRFGEHISWAESSAVSFANSVLGAKTNREGGPS ALAAAIIGKTPYYGYHLDENRKTTHIIELDGQLISNFKYGESFYGALGYLVGKIVKNGIPYFENLYKLNPNNDNLKSLGA AMAASGGIALYHAKNLTAECRVKEVVNDKIEKISIGVEEIKEAYEKLNTTNEEPDLICIGCPHCSLMEIKKIAELLKNKK LNADLWVCCSLHIKAIADRMGYTKIIEKAGGKVVKDTCMVVSPIEDLGYKRVATNSGKAAVYLPSFCKSEVIFGDIEELL KGR
Specific function: Unknown
COG id: COG1679
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.thermoautotrophicum MTH1421
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y1313_METJA (Q58709)
Other databases:
- EMBL: L77117 - PIR: H64463 - RefSeq: NP_248313.1 - ProteinModelPortal: Q58709 - GeneID: 1452215 - GenomeReviews: L77117_GR - KEGG: mja:MJ_1313 - NMPDR: fig|243232.1.peg.1350 - TIGR: MJ1313 - HOGENOM: HBG402504 - OMA: CTPYLTG - ProtClustDB: CLSK876523 - BioCyc: MJAN243232:MJ_1313-MONOMER - InterPro: IPR007506
Pfam domain/function: PF04412 DUF521
EC number: NA
Molecular weight: Translated: 44601; Mature: 44601
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYLTKEEEKILDGEYGEVLRRCMNLLVSLGDIYGADKLIPISSAQISGVSYKTIKDIGLE CCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCHHHHHHHHHH FLEDFAKEDVKVKVYATLNPAGMDLDIWRELGIDEKFAKKQLRIIEAFKKMEVEISCTCT HHHHHHCCCEEEEEEEEECCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHCCEEEEEEEE PYLTGNLPRFGEHISWAESSAVSFANSVLGAKTNREGGPSALAAAIIGKTPYYGYHLDEN CCCCCCCCHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCEEECCC RKTTHIIELDGQLISNFKYGESFYGALGYLVGKIVKNGIPYFENLYKLNPNNDNLKSLGA CCEEEEEEECCHHHHCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHEEECCCCCCHHHHHH AMAASGGIALYHAKNLTAECRVKEVVNDKIEKISIGVEEIKEAYEKLNTTNEEPDLICIG HHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCEEEEE CPHCSLMEIKKIAELLKNKKLNADLWVCCSLHIKAIADRMGYTKIIEKAGGKVVKDTCMV CCCCCHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHCCHHHHHHHHCCCEEECHHHE VSPIEDLGYKRVATNSGKAAVYLPSFCKSEVIFGDIEELLKGR EECHHHCCCEEEECCCCCEEEEECHHHCCCHHHHHHHHHHCCC >Mature Secondary Structure MYLTKEEEKILDGEYGEVLRRCMNLLVSLGDIYGADKLIPISSAQISGVSYKTIKDIGLE CCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCHHHHHHHHHH FLEDFAKEDVKVKVYATLNPAGMDLDIWRELGIDEKFAKKQLRIIEAFKKMEVEISCTCT HHHHHHCCCEEEEEEEEECCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHCCEEEEEEEE PYLTGNLPRFGEHISWAESSAVSFANSVLGAKTNREGGPSALAAAIIGKTPYYGYHLDEN CCCCCCCCHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCEEECCC RKTTHIIELDGQLISNFKYGESFYGALGYLVGKIVKNGIPYFENLYKLNPNNDNLKSLGA CCEEEEEEECCHHHHCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHEEECCCCCCHHHHHH AMAASGGIALYHAKNLTAECRVKEVVNDKIEKISIGVEEIKEAYEKLNTTNEEPDLICIG HHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCEEEEE CPHCSLMEIKKIAELLKNKKLNADLWVCCSLHIKAIADRMGYTKIIEKAGGKVVKDTCMV CCCCCHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHCCHHHHHHHHCCCEEECHHHE VSPIEDLGYKRVATNSGKAAVYLPSFCKSEVIFGDIEELLKGR EECHHHCCCEEEECCCCCEEEEECHHHCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087