| Definition | Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome. |
|---|---|
| Accession | NC_000909 |
| Length | 1,664,970 |
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The map label for this gene is 15669502
Identifier: 15669502
GI number: 15669502
Start: 1257316
End: 1258281
Strand: Direct
Name: 15669502
Synonym: MJ1312
Alternate gene names: NA
Gene position: 1257316-1258281 (Clockwise)
Preceding gene: 15669501
Following gene: 15669503
Centisome position: 75.52
GC content: 27.85
Gene sequence:
>966_bases ATGACTATAGCATTTGGACCAGTTCCATCAAGGAGGTTAGGGAAGAGTCTAGGGATAAATAGCATTCCATGTAAGTTTTG TAGTTATGATTGTGTATATTGCCAAGTTGGAAGAACCATAAACAAAACTATAGAGAGGAGAGAGTTTTATAGTCCAGAAG ATATTTTTAAGTCAGTAGAGGAGAGGATAGGTAAGCTAAATAATGAGAAAATTGACTACCTCACTTTTGTTGCAGATGGA GAGCCAACATTAGATATAAATTTATCAAAAGAAGTTGAAATGCTTAGAGATTTTGACATTCCAATAGCAATAATTACAAA CTCTTCATTAATTTGGAGGGAAGATGTTAGAAATGACATATTAAACTTTGATTTAGTATCTTTTAAGGTTGATTCTGTTG ATGAAAAAATTTGGAGAGAAATAAATAGACCTCATAAAGATTTGGTGTTAGATAAAATCTTAGAAGGAATGATAGCTTTT AGAGATAACTATAAAGGAGAGTTGATAACTGAAACGATGATTTTAGGAAGTATAAAATATACAGAGGAATCTATAATCAA AACAGCAGAATTTTTAAAAGAATTAAATCCAAATAAATGCTATTTAAATACTCCAATAAGGCCACCATCTGAAAAATATA TAAAACCTCCTAAAATAGAAGTTATAACTAAAATATTAGCCATATTTAATGAAATTATTGGTAAAAATAAAATTAAACTC TTAGGGAAATTTGAAGGAAATGAATTTATATTCTCTGAAAATGTTGAAGAGGATATATTGGCTATAACTTCCGTTCATCC AATGAGAGAGGAAGTTATTAAAGAATTGTTAAATAAATCAAATATTAGCTTTGATATTATAAATAAAATGGTAAATGAGG GAAAACTAATAAAATTAGAATATGATGGAAAAGTATTCTATATGAAAAATATTAAAAGTAGGGATAAAAATGTATCTAAC CCATAG
Upstream 100 bases:
>100_bases GGAAATATTAAAAGAATATTTGGAAATCGTTAATGAGAAAGTGGCTGAGAAGGAGAAAATAGAGGAATAATTTTATATTT TATTTATTTTTGGTGGTTCT
Downstream 100 bases:
>100_bases GGCTTCGCCCTATTGGGATACCCAGAGCGGGGCTTCACTACATTCAGCCCTACTGTAATCTATTTTTAATCAGATTTTTA GTAAAAATTTGAGGGATAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 321; Mature: 320
Protein sequence:
>321_residues MTIAFGPVPSRRLGKSLGINSIPCKFCSYDCVYCQVGRTINKTIERREFYSPEDIFKSVEERIGKLNNEKIDYLTFVADG EPTLDINLSKEVEMLRDFDIPIAIITNSSLIWREDVRNDILNFDLVSFKVDSVDEKIWREINRPHKDLVLDKILEGMIAF RDNYKGELITETMILGSIKYTEESIIKTAEFLKELNPNKCYLNTPIRPPSEKYIKPPKIEVITKILAIFNEIIGKNKIKL LGKFEGNEFIFSENVEEDILAITSVHPMREEVIKELLNKSNISFDIINKMVNEGKLIKLEYDGKVFYMKNIKSRDKNVSN P
Sequences:
>Translated_321_residues MTIAFGPVPSRRLGKSLGINSIPCKFCSYDCVYCQVGRTINKTIERREFYSPEDIFKSVEERIGKLNNEKIDYLTFVADG EPTLDINLSKEVEMLRDFDIPIAIITNSSLIWREDVRNDILNFDLVSFKVDSVDEKIWREINRPHKDLVLDKILEGMIAF RDNYKGELITETMILGSIKYTEESIIKTAEFLKELNPNKCYLNTPIRPPSEKYIKPPKIEVITKILAIFNEIIGKNKIKL LGKFEGNEFIFSENVEEDILAITSVHPMREEVIKELLNKSNISFDIINKMVNEGKLIKLEYDGKVFYMKNIKSRDKNVSN P >Mature_320_residues TIAFGPVPSRRLGKSLGINSIPCKFCSYDCVYCQVGRTINKTIERREFYSPEDIFKSVEERIGKLNNEKIDYLTFVADGE PTLDINLSKEVEMLRDFDIPIAIITNSSLIWREDVRNDILNFDLVSFKVDSVDEKIWREINRPHKDLVLDKILEGMIAFR DNYKGELITETMILGSIKYTEESIIKTAEFLKELNPNKCYLNTPIRPPSEKYIKPPKIEVITKILAIFNEIIGKNKIKLL GKFEGNEFIFSENVEEDILAITSVHPMREEVIKELLNKSNISFDIINKMVNEGKLIKLEYDGKVFYMKNIKSRDKNVSNP
Specific function: Unknown
COG id: COG0731
COG function: function code C; Fe-S oxidoreductases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0026 family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y1312_METJA (Q58708)
Other databases:
- EMBL: L77117 - PIR: G64463 - RefSeq: NP_248312.1 - ProteinModelPortal: Q58708 - SMR: Q58708 - GeneID: 1452214 - GenomeReviews: L77117_GR - KEGG: mja:MJ_1312 - NMPDR: fig|243232.1.peg.1349 - TIGR: MJ1312 - HOGENOM: HBG463712 - OMA: ITAVHPM - ProtClustDB: CLSK2517721 - BioCyc: MJAN243232:MJ_1312-MONOMER - InterPro: IPR006638 - InterPro: IPR007197 - SMART: SM00729
Pfam domain/function: PF04055 Radical_SAM
EC number: NA
Molecular weight: Translated: 37132; Mature: 37000
Theoretical pI: Translated: 5.64; Mature: 5.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIAFGPVPSRRLGKSLGINSIPCKFCSYDCVYCQVGRTINKTIERREFYSPEDIFKSVE CEEECCCCCHHHHHHHCCCCCCCHHHCCCCEEEEECCCHHHHHHHHHHCCCHHHHHHHHH ERIGKLNNEKIDYLTFVADGEPTLDINLSKEVEMLRDFDIPIAIITNSSLIWREDVRNDI HHHCCCCCCCEEEEEEEECCCCEEEEECHHHHHHHHHCCCCEEEEECCCEEEHHHHHHHH LNFDLVSFKVDSVDEKIWREINRPHKDLVLDKILEGMIAFRDNYKGELITETMILGSIKY HCCEEEEEEECHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHCCCHH TEESIIKTAEFLKELNPNKCYLNTPIRPPSEKYIKPPKIEVITKILAIFNEIIGKNKIKL HHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHCCCCCHHHHHHHHHHHHHHHHCCCCEEE LGKFEGNEFIFSENVEEDILAITSVHPMREEVIKELLNKSNISFDIINKMVNEGKLIKLE EEEECCCEEEECCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHCCCCEEEEE YDGKVFYMKNIKSRDKNVSNP ECCEEEEEECCCCCCCCCCCC >Mature Secondary Structure TIAFGPVPSRRLGKSLGINSIPCKFCSYDCVYCQVGRTINKTIERREFYSPEDIFKSVE EEECCCCCHHHHHHHCCCCCCCHHHCCCCEEEEECCCHHHHHHHHHHCCCHHHHHHHHH ERIGKLNNEKIDYLTFVADGEPTLDINLSKEVEMLRDFDIPIAIITNSSLIWREDVRNDI HHHCCCCCCCEEEEEEEECCCCEEEEECHHHHHHHHHCCCCEEEEECCCEEEHHHHHHHH LNFDLVSFKVDSVDEKIWREINRPHKDLVLDKILEGMIAFRDNYKGELITETMILGSIKY HCCEEEEEEECHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHCCCHH TEESIIKTAEFLKELNPNKCYLNTPIRPPSEKYIKPPKIEVITKILAIFNEIIGKNKIKL HHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHCCCCCHHHHHHHHHHHHHHHHCCCCEEE LGKFEGNEFIFSENVEEDILAITSVHPMREEVIKELLNKSNISFDIINKMVNEGKLIKLE EEEECCCEEEECCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHCCCCEEEEE YDGKVFYMKNIKSRDKNVSNP ECCEEEEEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087