Definition Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome.
Accession NC_000909
Length 1,664,970

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The map label for this gene is 15669502

Identifier: 15669502

GI number: 15669502

Start: 1257316

End: 1258281

Strand: Direct

Name: 15669502

Synonym: MJ1312

Alternate gene names: NA

Gene position: 1257316-1258281 (Clockwise)

Preceding gene: 15669501

Following gene: 15669503

Centisome position: 75.52

GC content: 27.85

Gene sequence:

>966_bases
ATGACTATAGCATTTGGACCAGTTCCATCAAGGAGGTTAGGGAAGAGTCTAGGGATAAATAGCATTCCATGTAAGTTTTG
TAGTTATGATTGTGTATATTGCCAAGTTGGAAGAACCATAAACAAAACTATAGAGAGGAGAGAGTTTTATAGTCCAGAAG
ATATTTTTAAGTCAGTAGAGGAGAGGATAGGTAAGCTAAATAATGAGAAAATTGACTACCTCACTTTTGTTGCAGATGGA
GAGCCAACATTAGATATAAATTTATCAAAAGAAGTTGAAATGCTTAGAGATTTTGACATTCCAATAGCAATAATTACAAA
CTCTTCATTAATTTGGAGGGAAGATGTTAGAAATGACATATTAAACTTTGATTTAGTATCTTTTAAGGTTGATTCTGTTG
ATGAAAAAATTTGGAGAGAAATAAATAGACCTCATAAAGATTTGGTGTTAGATAAAATCTTAGAAGGAATGATAGCTTTT
AGAGATAACTATAAAGGAGAGTTGATAACTGAAACGATGATTTTAGGAAGTATAAAATATACAGAGGAATCTATAATCAA
AACAGCAGAATTTTTAAAAGAATTAAATCCAAATAAATGCTATTTAAATACTCCAATAAGGCCACCATCTGAAAAATATA
TAAAACCTCCTAAAATAGAAGTTATAACTAAAATATTAGCCATATTTAATGAAATTATTGGTAAAAATAAAATTAAACTC
TTAGGGAAATTTGAAGGAAATGAATTTATATTCTCTGAAAATGTTGAAGAGGATATATTGGCTATAACTTCCGTTCATCC
AATGAGAGAGGAAGTTATTAAAGAATTGTTAAATAAATCAAATATTAGCTTTGATATTATAAATAAAATGGTAAATGAGG
GAAAACTAATAAAATTAGAATATGATGGAAAAGTATTCTATATGAAAAATATTAAAAGTAGGGATAAAAATGTATCTAAC
CCATAG

Upstream 100 bases:

>100_bases
GGAAATATTAAAAGAATATTTGGAAATCGTTAATGAGAAAGTGGCTGAGAAGGAGAAAATAGAGGAATAATTTTATATTT
TATTTATTTTTGGTGGTTCT

Downstream 100 bases:

>100_bases
GGCTTCGCCCTATTGGGATACCCAGAGCGGGGCTTCACTACATTCAGCCCTACTGTAATCTATTTTTAATCAGATTTTTA
GTAAAAATTTGAGGGATAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 321; Mature: 320

Protein sequence:

>321_residues
MTIAFGPVPSRRLGKSLGINSIPCKFCSYDCVYCQVGRTINKTIERREFYSPEDIFKSVEERIGKLNNEKIDYLTFVADG
EPTLDINLSKEVEMLRDFDIPIAIITNSSLIWREDVRNDILNFDLVSFKVDSVDEKIWREINRPHKDLVLDKILEGMIAF
RDNYKGELITETMILGSIKYTEESIIKTAEFLKELNPNKCYLNTPIRPPSEKYIKPPKIEVITKILAIFNEIIGKNKIKL
LGKFEGNEFIFSENVEEDILAITSVHPMREEVIKELLNKSNISFDIINKMVNEGKLIKLEYDGKVFYMKNIKSRDKNVSN
P

Sequences:

>Translated_321_residues
MTIAFGPVPSRRLGKSLGINSIPCKFCSYDCVYCQVGRTINKTIERREFYSPEDIFKSVEERIGKLNNEKIDYLTFVADG
EPTLDINLSKEVEMLRDFDIPIAIITNSSLIWREDVRNDILNFDLVSFKVDSVDEKIWREINRPHKDLVLDKILEGMIAF
RDNYKGELITETMILGSIKYTEESIIKTAEFLKELNPNKCYLNTPIRPPSEKYIKPPKIEVITKILAIFNEIIGKNKIKL
LGKFEGNEFIFSENVEEDILAITSVHPMREEVIKELLNKSNISFDIINKMVNEGKLIKLEYDGKVFYMKNIKSRDKNVSN
P
>Mature_320_residues
TIAFGPVPSRRLGKSLGINSIPCKFCSYDCVYCQVGRTINKTIERREFYSPEDIFKSVEERIGKLNNEKIDYLTFVADGE
PTLDINLSKEVEMLRDFDIPIAIITNSSLIWREDVRNDILNFDLVSFKVDSVDEKIWREINRPHKDLVLDKILEGMIAFR
DNYKGELITETMILGSIKYTEESIIKTAEFLKELNPNKCYLNTPIRPPSEKYIKPPKIEVITKILAIFNEIIGKNKIKLL
GKFEGNEFIFSENVEEDILAITSVHPMREEVIKELLNKSNISFDIINKMVNEGKLIKLEYDGKVFYMKNIKSRDKNVSNP

Specific function: Unknown

COG id: COG0731

COG function: function code C; Fe-S oxidoreductases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0026 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1312_METJA (Q58708)

Other databases:

- EMBL:   L77117
- PIR:   G64463
- RefSeq:   NP_248312.1
- ProteinModelPortal:   Q58708
- SMR:   Q58708
- GeneID:   1452214
- GenomeReviews:   L77117_GR
- KEGG:   mja:MJ_1312
- NMPDR:   fig|243232.1.peg.1349
- TIGR:   MJ1312
- HOGENOM:   HBG463712
- OMA:   ITAVHPM
- ProtClustDB:   CLSK2517721
- BioCyc:   MJAN243232:MJ_1312-MONOMER
- InterPro:   IPR006638
- InterPro:   IPR007197
- SMART:   SM00729

Pfam domain/function: PF04055 Radical_SAM

EC number: NA

Molecular weight: Translated: 37132; Mature: 37000

Theoretical pI: Translated: 5.64; Mature: 5.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIAFGPVPSRRLGKSLGINSIPCKFCSYDCVYCQVGRTINKTIERREFYSPEDIFKSVE
CEEECCCCCHHHHHHHCCCCCCCHHHCCCCEEEEECCCHHHHHHHHHHCCCHHHHHHHHH
ERIGKLNNEKIDYLTFVADGEPTLDINLSKEVEMLRDFDIPIAIITNSSLIWREDVRNDI
HHHCCCCCCCEEEEEEEECCCCEEEEECHHHHHHHHHCCCCEEEEECCCEEEHHHHHHHH
LNFDLVSFKVDSVDEKIWREINRPHKDLVLDKILEGMIAFRDNYKGELITETMILGSIKY
HCCEEEEEEECHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHCCCHH
TEESIIKTAEFLKELNPNKCYLNTPIRPPSEKYIKPPKIEVITKILAIFNEIIGKNKIKL
HHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHCCCCCHHHHHHHHHHHHHHHHCCCCEEE
LGKFEGNEFIFSENVEEDILAITSVHPMREEVIKELLNKSNISFDIINKMVNEGKLIKLE
EEEECCCEEEECCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHCCCCEEEEE
YDGKVFYMKNIKSRDKNVSNP
ECCEEEEEECCCCCCCCCCCC
>Mature Secondary Structure 
TIAFGPVPSRRLGKSLGINSIPCKFCSYDCVYCQVGRTINKTIERREFYSPEDIFKSVE
EEECCCCCHHHHHHHCCCCCCCHHHCCCCEEEEECCCHHHHHHHHHHCCCHHHHHHHHH
ERIGKLNNEKIDYLTFVADGEPTLDINLSKEVEMLRDFDIPIAIITNSSLIWREDVRNDI
HHHCCCCCCCEEEEEEEECCCCEEEEECHHHHHHHHHCCCCEEEEECCCEEEHHHHHHHH
LNFDLVSFKVDSVDEKIWREINRPHKDLVLDKILEGMIAFRDNYKGELITETMILGSIKY
HCCEEEEEEECHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHCCCHH
TEESIIKTAEFLKELNPNKCYLNTPIRPPSEKYIKPPKIEVITKILAIFNEIIGKNKIKL
HHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHCCCCCHHHHHHHHHHHHHHHHCCCCEEE
LGKFEGNEFIFSENVEEDILAITSVHPMREEVIKELLNKSNISFDIINKMVNEGKLIKLE
EEEECCCEEEECCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHCCCCEEEEE
YDGKVFYMKNIKSRDKNVSNP
ECCEEEEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087