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The map label for this gene is 15669476

Identifier: 15669476

GI number: 15669476

Start: 1235149

End: 1235907

Strand: Reverse

Name: 15669476

Synonym: MJ1288

Alternate gene names: NA

Gene position: 1235907-1235149 (Counterclockwise)

Preceding gene: 15669477

Following gene: 15669475

Centisome position: 74.23

GC content: 27.4

Gene sequence:

>759_bases
GTGATATTTATGGTAATAAAGAAAATATTTGGTGAAAATTTTAATTTTAACAAAAATATAGACATTAAAAAAATTTTTAA
ATTAGACAAAAATGTAAAAAAGGATAGAGAGGAAAATGAAAGTTATTTGGATGCTTTAAAAGAGATTTATGAAGAAATTA
AAAATCTTGAAATTTATGAAAAAATGACGATTGGTATGGCGGAGATTATAATTGGTTATGATAATGTAGAAAAAACAAAA
AAGTATATTGTTATTGAGCCAATTCTAACAAAAGAAGAGATAAAACTATTTTTAAAACTAAGAAAAGTTGTTCAGGCATT
ATTGGATGTTCCAGTTGAAGAAATAGACAAAGAAAAGTTGGAGGATTATTTAAAAGAAAAAATTAAAGAAATTTTTGACG
ATTTAAAATTAACATTGGATGATGTAACAAGACATAAGTTAATTTACTTTTTAATTAAATACCTCATTGGATATGGGAAA
ATAGATGCTCTTATGAAAGATGAGAATTTGGAGGATATCAGTTGCACAGGTGTTGGAAAGCCAGTGTATGTGTTTCATAG
AAAATACGAACATTTAAAGACAAATATAAAATTTGAAACTGATGAAGAATTAGACTCGTTTTGTATATCCTTAGCCCAAA
GGTGTGGAAAATCTTTAACATTGGCTAATCCAATAGTGGATGGTTCTCTCCCAGATGGTAGCAGGCTAAATGTAACCCTT
GGAAGGGATATCTCAGATATGGTTCAACATTTACAATAA

Upstream 100 bases:

>100_bases
ATAAGTTTAATAACAACATTAGATTCTTTAAAAATGAGATTTCTGACATTTCTAAAATCTCATGTAAAAAGGTCAATAAC
ACCTATATGATTTATATAGA

Downstream 100 bases:

>100_bases
GAAAATTCACACACACTCCTATATTGCCAACAGATTTAATAAGATATGGGAGTATTTCTCCAGAGATGCTTGCATATCTT
TGGTTACTCATTGAATATAA

Product: type II secretion system protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 252; Mature: 252

Protein sequence:

>252_residues
MIFMVIKKIFGENFNFNKNIDIKKIFKLDKNVKKDREENESYLDALKEIYEEIKNLEIYEKMTIGMAEIIIGYDNVEKTK
KYIVIEPILTKEEIKLFLKLRKVVQALLDVPVEEIDKEKLEDYLKEKIKEIFDDLKLTLDDVTRHKLIYFLIKYLIGYGK
IDALMKDENLEDISCTGVGKPVYVFHRKYEHLKTNIKFETDEELDSFCISLAQRCGKSLTLANPIVDGSLPDGSRLNVTL
GRDISDMVQHLQ

Sequences:

>Translated_252_residues
MIFMVIKKIFGENFNFNKNIDIKKIFKLDKNVKKDREENESYLDALKEIYEEIKNLEIYEKMTIGMAEIIIGYDNVEKTK
KYIVIEPILTKEEIKLFLKLRKVVQALLDVPVEEIDKEKLEDYLKEKIKEIFDDLKLTLDDVTRHKLIYFLIKYLIGYGK
IDALMKDENLEDISCTGVGKPVYVFHRKYEHLKTNIKFETDEELDSFCISLAQRCGKSLTLANPIVDGSLPDGSRLNVTL
GRDISDMVQHLQ
>Mature_252_residues
MIFMVIKKIFGENFNFNKNIDIKKIFKLDKNVKKDREENESYLDALKEIYEEIKNLEIYEKMTIGMAEIIIGYDNVEKTK
KYIVIEPILTKEEIKLFLKLRKVVQALLDVPVEEIDKEKLEDYLKEKIKEIFDDLKLTLDDVTRHKLIYFLIKYLIGYGK
IDALMKDENLEDISCTGVGKPVYVFHRKYEHLKTNIKFETDEELDSFCISLAQRCGKSLTLANPIVDGSLPDGSRLNVTL
GRDISDMVQHLQ

Specific function: Unknown

COG id: COG0630

COG function: function code NU; Type IV secretory pathway, VirB11 components, and related ATPases involved in archaeal flagella biosynthesis

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GSP E family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1288_METJA (Q58684)

Other databases:

- EMBL:   L77117
- PIR:   G64460
- RefSeq:   NP_248286.1
- ProteinModelPortal:   Q58684
- SMR:   Q58684
- GeneID:   1452188
- GenomeReviews:   L77117_GR
- KEGG:   mja:MJ_1288
- NMPDR:   fig|243232.1.peg.1323
- TIGR:   MJ1288
- BioCyc:   MJAN243232:MJ_1288-MONOMER

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29482; Mature: 29482

Theoretical pI: Translated: 5.32; Mature: 5.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIFMVIKKIFGENFNFNKNIDIKKIFKLDKNVKKDREENESYLDALKEIYEEIKNLEIYE
CHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHH
KMTIGMAEIIIGYDNVEKTKKYIVIEPILTKEEIKLFLKLRKVVQALLDVPVEEIDKEKL
HHHHHHHHHHCCCCCHHHHCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
EDYLKEKIKEIFDDLKLTLDDVTRHKLIYFLIKYLIGYGKIDALMKDENLEDISCTGVGK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCEECCCCC
PVYVFHRKYEHLKTNIKFETDEELDSFCISLAQRCGKSLTLANPIVDGSLPDGSRLNVTL
CHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCCCEEEEEE
GRDISDMVQHLQ
CCCHHHHHHHCC
>Mature Secondary Structure
MIFMVIKKIFGENFNFNKNIDIKKIFKLDKNVKKDREENESYLDALKEIYEEIKNLEIYE
CHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHH
KMTIGMAEIIIGYDNVEKTKKYIVIEPILTKEEIKLFLKLRKVVQALLDVPVEEIDKEKL
HHHHHHHHHHCCCCCHHHHCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
EDYLKEKIKEIFDDLKLTLDDVTRHKLIYFLIKYLIGYGKIDALMKDENLEDISCTGVGK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCEECCCCC
PVYVFHRKYEHLKTNIKFETDEELDSFCISLAQRCGKSLTLANPIVDGSLPDGSRLNVTL
CHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCCCEEEEEE
GRDISDMVQHLQ
CCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087