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The map label for this gene is 15669444

Identifier: 15669444

GI number: 15669444

Start: 1200672

End: 1200875

Strand: Direct

Name: 15669444

Synonym: MJ1258

Alternate gene names: NA

Gene position: 1200672-1200875 (Clockwise)

Preceding gene: 15669443

Following gene: 15669445

Centisome position: 72.11

GC content: 43.14

Gene sequence:

>204_bases
ATGGCTGAGCTTCCAGTTGCACCATGTGTAAGAATCTTAAAGAAGGCTGGTGCTCAGAGAGTTAGTGAAGCGGCAGGGAA
ATACTTTGCTGAAGCTTTGGAAGAAATTGCCTTAGAGATAGCAAGGAAATCAGTTGATTTAGCTAAGCACGCAAAGAGAA
AGACCGTAAAGGTCGAAGATGTAAAGGCAGCATTGAGAGGTTAA

Upstream 100 bases:

>100_bases
ATACTCAAAAAAGTATAGCAAAAATATTTAGGAATATCTCCGAAAAATATATATACTCCCATAATAAAAAATTGAAAATG
TAAGATTCTGAGGTGGTATT

Downstream 100 bases:

>100_bases
GCCCAACTTACATTATATGTATAATATCACTACACCTTTTTATTTTTTGTGCATATTAATAGAAATATTTGAATATTTAG
AACTAAATGGAATTAAAATA

Product: histone A3

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 67; Mature: 66

Protein sequence:

>67_residues
MAELPVAPCVRILKKAGAQRVSEAAGKYFAEALEEIALEIARKSVDLAKHAKRKTVKVEDVKAALRG

Sequences:

>Translated_67_residues
MAELPVAPCVRILKKAGAQRVSEAAGKYFAEALEEIALEIARKSVDLAKHAKRKTVKVEDVKAALRG
>Mature_66_residues
AELPVAPCVRILKKAGAQRVSEAAGKYFAEALEEIALEIARKSVDLAKHAKRKTVKVEDVKAALRG

Specific function: Binds and compact DNA (95 to 150 base pairs) to form nucleosome-like structures that contain positive DNA supercoils. Increases the resistance of DNA to thermal denaturation

COG id: COG2036

COG function: function code B; Histones H3 and H4

Gene ontology:

Cell location: Cytoplasm (Potential). Chromosome (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the archaeal histone HMF family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): HJA3_METJA (Q58655)

Other databases:

- EMBL:   L77117
- PIR:   A64457
- RefSeq:   NP_248254.1
- ProteinModelPortal:   Q58655
- SMR:   Q58655
- GeneID:   1452156
- GenomeReviews:   L77117_GR
- KEGG:   mja:MJ_1258
- NMPDR:   fig|243232.1.peg.1291
- TIGR:   MJ1258
- HOGENOM:   HBG392052
- OMA:   APCVRIL
- ProtClustDB:   CLSK2517707
- BioCyc:   MJAN243232:MJ_1258-MONOMER
- GO:   GO:0005694
- GO:   GO:0005737
- InterPro:   IPR003958
- InterPro:   IPR009072
- Gene3D:   G3DSA:1.10.20.10

Pfam domain/function: PF00808 CBFD_NFYB_HMF; SSF47113 Histone-fold

EC number: NA

Molecular weight: Translated: 7245; Mature: 7113

Theoretical pI: Translated: 10.35; Mature: 10.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAELPVAPCVRILKKAGAQRVSEAAGKYFAEALEEIALEIARKSVDLAKHAKRKTVKVED
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
VKAALRG
HHHHHCC
>Mature Secondary Structure 
AELPVAPCVRILKKAGAQRVSEAAGKYFAEALEEIALEIARKSVDLAKHAKRKTVKVED
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
VKAALRG
HHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087