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The map label for this gene is secF [C]

Identifier: 15669439

GI number: 15669439

Start: 1194978

End: 1195826

Strand: Reverse

Name: secF [C]

Synonym: MJ1253

Alternate gene names: 15669439

Gene position: 1195826-1194978 (Counterclockwise)

Preceding gene: 15669450

Following gene: 15669437

Centisome position: 71.82

GC content: 30.62

Gene sequence:

>849_bases
ATGATAAAAGATTATAAAGTGTCTATAGCTATTCCAATAGCCCTTCTTATACTTTCAATTTTGTTAATTGGTTTTAAAGG
GATTCCAAAAAGTATAGATATAACTGGAGGGACAGAAATAACAATTAAAGTAAATGAAAACATGGATATAACTCCTCTAA
AAGAGTCACTTAATGGAATAGCTGAAGTAAAAAAATTAGAATCAGCTGATGGATATTACATAGTCATTAGATGTAAGAAT
GAAGATGTAGATATTGTAAAGCAGAAAATTAAGGAATTTTTCCACGTGGATAGCTTAGATAAGTTAAATTATTCTGAAAA
GACGATTGGGGCTACTTTAAGCTCTAAATTCTTTGAAGAAGGATTTAAAGCTGTTGGATTTGCATTTATGTTTATGGCTA
TTGTAGTTTATCTATATTTCAGAAATCCAGTGCCAAGTGGTGCTATAATATTATCTGCACTTTCAGATATAATTATGGCT
TTAGGGGCTATGAGCTTATTAGGAATTGAGCTTTCCTCTGCAACTATAGCGGCTTTATTAATGGTTATTGGTTACAGTGT
AGATTCAGATATACTGCTAACAACAAGAGTTCTAAAGAGATTAACAAAGAGCTTTGATGAAACTGTTAAAGAGGCTATGA
AAACAGGTTTAACAATGACATTAACAACAATCACTGCTATGCTAATATTATTAATTGTTGTAAAGCTCTTCATTCCAGTA
GCAGATATACTGGCAAATATAGCAACTGTCTTAATTTTGGCTTTAATTGCTGACATTATAAACACTTGGCTATTGAATGC
TGGAATATTAAAATACTACATAACTGAATATAGAGCAAAGAAGATTTAA

Upstream 100 bases:

>100_bases
AACATACTTTGGATGGTATTTGCAGAGCCTCTGCAAATATCTCTATTAAAAAATACCTTTCAATAATATAATATATACAT
TAATTAATGGGGTTGGAAAA

Downstream 100 bases:

>100_bases
TTAAATATTTAAAAATACTCTTTTTTTAAAATCTCTAAAAACCTTTTTATTCCCTTCTCAATACCATTTTTTTGCCTCTC
TTTAATATTTTCAAAAGTTA

Product: preprotein translocase subunit SecF

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 282; Mature: 282

Protein sequence:

>282_residues
MIKDYKVSIAIPIALLILSILLIGFKGIPKSIDITGGTEITIKVNENMDITPLKESLNGIAEVKKLESADGYYIVIRCKN
EDVDIVKQKIKEFFHVDSLDKLNYSEKTIGATLSSKFFEEGFKAVGFAFMFMAIVVYLYFRNPVPSGAIILSALSDIIMA
LGAMSLLGIELSSATIAALLMVIGYSVDSDILLTTRVLKRLTKSFDETVKEAMKTGLTMTLTTITAMLILLIVVKLFIPV
ADILANIATVLILALIADIINTWLLNAGILKYYITEYRAKKI

Sequences:

>Translated_282_residues
MIKDYKVSIAIPIALLILSILLIGFKGIPKSIDITGGTEITIKVNENMDITPLKESLNGIAEVKKLESADGYYIVIRCKN
EDVDIVKQKIKEFFHVDSLDKLNYSEKTIGATLSSKFFEEGFKAVGFAFMFMAIVVYLYFRNPVPSGAIILSALSDIIMA
LGAMSLLGIELSSATIAALLMVIGYSVDSDILLTTRVLKRLTKSFDETVKEAMKTGLTMTLTTITAMLILLIVVKLFIPV
ADILANIATVLILALIADIINTWLLNAGILKYYITEYRAKKI
>Mature_282_residues
MIKDYKVSIAIPIALLILSILLIGFKGIPKSIDITGGTEITIKVNENMDITPLKESLNGIAEVKKLESADGYYIVIRCKN
EDVDIVKQKIKEFFHVDSLDKLNYSEKTIGATLSSKFFEEGFKAVGFAFMFMAIVVYLYFRNPVPSGAIILSALSDIIMA
LGAMSLLGIELSSATIAALLMVIGYSVDSDILLTTRVLKRLTKSFDETVKEAMKTGLTMTLTTITAMLILLIVVKLFIPV
ADILANIATVLILALIADIINTWLLNAGILKYYITEYRAKKI

Specific function: Involved In Protein Export. [C]

COG id: COG0341

COG function: function code U; Preprotein translocase subunit SecF

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the secD/secF family

Homologues:

Organism=Escherichia coli, GI1786610, Length=255, Percent_Identity=25.0980392156863, Blast_Score=68, Evalue=7e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1253_METJA (Q58650)

Other databases:

- EMBL:   L77117
- PIR:   D64456
- RefSeq:   NP_248249.1
- ProteinModelPortal:   Q58650
- GeneID:   1452151
- GenomeReviews:   L77117_GR
- KEGG:   mja:MJ_1253
- NMPDR:   fig|243232.1.peg.1286
- TIGR:   MJ1253
- HOGENOM:   HBG540925
- OMA:   ESSIGTF
- ProtClustDB:   PRK08578
- BioCyc:   MJAN243232:MJ_1253-MONOMER
- InterPro:   IPR022813

Pfam domain/function: PF02355 SecD_SecF

EC number: NA

Molecular weight: Translated: 31030; Mature: 31030

Theoretical pI: Translated: 8.34; Mature: 8.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xddca7d8)-; HASH(0xe170500)-; HASH(0xda687fc)-; HASH(0xe4714ac)-; HASH(0xe39f080)-; HASH(0xd6503d0)-;

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKDYKVSIAIPIALLILSILLIGFKGIPKSIDITGGTEITIKVNENMDITPLKESLNGI
CCCCEEEHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCEEEEEECCCCCCCHHHHHHHHH
AEVKKLESADGYYIVIRCKNEDVDIVKQKIKEFFHVDSLDKLNYSEKTIGATLSSKFFEE
HHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHCCCCHHHCCCCHHHHHHHHHHHHHHH
GFKAVGFAFMFMAIVVYLYFRNPVPSGAIILSALSDIIMALGAMSLLGIELSSATIAALL
HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MVIGYSVDSDILLTTRVLKRLTKSFDETVKEAMKTGLTMTLTTITAMLILLIVVKLFIPV
HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
ADILANIATVLILALIADIINTWLLNAGILKYYITEYRAKKI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
>Mature Secondary Structure
MIKDYKVSIAIPIALLILSILLIGFKGIPKSIDITGGTEITIKVNENMDITPLKESLNGI
CCCCEEEHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCEEEEEECCCCCCCHHHHHHHHH
AEVKKLESADGYYIVIRCKNEDVDIVKQKIKEFFHVDSLDKLNYSEKTIGATLSSKFFEE
HHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHCCCCHHHCCCCHHHHHHHHHHHHHHH
GFKAVGFAFMFMAIVVYLYFRNPVPSGAIILSALSDIIMALGAMSLLGIELSSATIAALL
HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MVIGYSVDSDILLTTRVLKRLTKSFDETVKEAMKTGLTMTLTTITAMLILLIVVKLFIPV
HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
ADILANIATVLILALIADIINTWLLNAGILKYYITEYRAKKI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8688087