Definition Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome.
Accession NC_000909
Length 1,664,970

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The map label for this gene is 15669435

Identifier: 15669435

GI number: 15669435

Start: 1192456

End: 1192956

Strand: Direct

Name: 15669435

Synonym: MJ1249.1

Alternate gene names: NA

Gene position: 1192456-1192956 (Clockwise)

Preceding gene: 15669434

Following gene: 15669436

Centisome position: 71.62

GC content: 23.75

Gene sequence:

>501_bases
ATGAGAGGAATAAACCCAGTATTGTTTAAAATATCTTTTTTATTAATAATTCTGGTTTCCTTAATATTGTCTTTATTTTA
TTATAATTTTCTATTTGCCTTCCTACTTTCTTTTATTTTATTTGGAATTACTTGGGCGTATTGTTATATAAAGATTGAAA
GCACTGACAAAGGAAAATTACTTTACGAAATAAAAAGACCCGGTATAGAAACTTTAAGATTTTTATTTATTCTTATGATT
ATTAGCGTTTTTATAAAATCCCTACTTCATTCAAATAGTTTCTTCCCATATATAAGTTTTTTATTATCAAATTTAATTTT
AGGACTTGTTTTATTTGACGACTACATTTTAGGAAATCCAACAATAAAGTTTTATGAAAAAGGAGTTGTATTTGATAGAG
TTGCATTTTATAATTGGGAGGAACTCGATATAAAAGAAGATGAAGGCTATTTAAAGATTAAGATAAAATATTATCCAAAG
GAAATTATGTATAAAAAATAA

Upstream 100 bases:

>100_bases
TGATTTAAAACCTGGAGACAAAGTTTTAATAAAACCAGAGGAGTATGCAAGGCATTTTGGAATGGCAATAAAAGAGACGA
TTATTGAAAAGTGATAATAT

Downstream 100 bases:

>100_bases
ATCCTGTGAGATTATGAAGATAAAGATTGGCAAAGTTGAAAAAAGATTAAATCAAATTATTGAAGAGGAAGGAGCTGTCT
ATTTAACTCTATTAGACCCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 166; Mature: 166

Protein sequence:

>166_residues
MRGINPVLFKISFLLIILVSLILSLFYYNFLFAFLLSFILFGITWAYCYIKIESTDKGKLLYEIKRPGIETLRFLFILMI
ISVFIKSLLHSNSFFPYISFLLSNLILGLVLFDDYILGNPTIKFYEKGVVFDRVAFYNWEELDIKEDEGYLKIKIKYYPK
EIMYKK

Sequences:

>Translated_166_residues
MRGINPVLFKISFLLIILVSLILSLFYYNFLFAFLLSFILFGITWAYCYIKIESTDKGKLLYEIKRPGIETLRFLFILMI
ISVFIKSLLHSNSFFPYISFLLSNLILGLVLFDDYILGNPTIKFYEKGVVFDRVAFYNWEELDIKEDEGYLKIKIKYYPK
EIMYKK
>Mature_166_residues
MRGINPVLFKISFLLIILVSLILSLFYYNFLFAFLLSFILFGITWAYCYIKIESTDKGKLLYEIKRPGIETLRFLFILMI
ISVFIKSLLHSNSFFPYISFLLSNLILGLVLFDDYILGNPTIKFYEKGVVFDRVAFYNWEELDIKEDEGYLKIKIKYYPK
EIMYKK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To M.jannaschii MJ0795.1 and MJ0785.1

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YC4B_METJA (P81230)

Other databases:

- EMBL:   L77117
- RefSeq:   NP_248245.1
- ProteinModelPortal:   P81230
- GeneID:   1452147
- GenomeReviews:   L77117_GR
- KEGG:   mja:MJ_1249.1
- NMPDR:   fig|243232.1.peg.1282
- TIGR:   MJ1249.1
- ProtClustDB:   CLSK420098
- BioCyc:   MJAN243232:MJ_1249.1-MONOMER

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19749; Mature: 19749

Theoretical pI: Translated: 9.31; Mature: 9.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xe5bf14c)-; HASH(0xc7c4a2c)-; HASH(0xe2fbe8c)-; HASH(0xd8be384)-;

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRGINPVLFKISFLLIILVSLILSLFYYNFLFAFLLSFILFGITWAYCYIKIESTDKGKL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCE
LYEIKRPGIETLRFLFILMIISVFIKSLLHSNSFFPYISFLLSNLILGLVLFDDYILGNP
EEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC
TIKFYEKGVVFDRVAFYNWEELDIKEDEGYLKIKIKYYPKEIMYKK
CHHHHHCCCHHHHHHHCCCCCCCCCCCCCEEEEEEEECCHHHCCCH
>Mature Secondary Structure
MRGINPVLFKISFLLIILVSLILSLFYYNFLFAFLLSFILFGITWAYCYIKIESTDKGKL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCE
LYEIKRPGIETLRFLFILMIISVFIKSLLHSNSFFPYISFLLSNLILGLVLFDDYILGNP
EEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC
TIKFYEKGVVFDRVAFYNWEELDIKEDEGYLKIKIKYYPKEIMYKK
CHHHHHCCCHHHHHHHCCCCCCCCCCCCCEEEEEEEECCHHHCCCH

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8688087