Click here to switch to the map view.

The map label for this gene is 15669419

Identifier: 15669419

GI number: 15669419

Start: 1177941

End: 1178666

Strand: Reverse

Name: 15669419

Synonym: MJ1234

Alternate gene names: NA

Gene position: 1178666-1177941 (Counterclockwise)

Preceding gene: 15669420

Following gene: 15669417

Centisome position: 70.79

GC content: 28.24

Gene sequence:

>726_bases
ATGAGGTTAAAGTTATCCCTAACTCCTAAACAAGATTTTTCTTTTGATAAAATTAATAAACATACTATACAGGGTTTTAT
TTATTCTCTTTTAAAGGATACTGAGTTTGGGGAGATGCATAATCAGCCAAGGTTTAAGTTTTGGTGTTTTTCTGATATAT
TTCCACCGAATGATTTTGTTAAAGGGGAGGATAAATATCTACTAATATCCTCACCAAGGGAGGAGTTTATTAATGTATTA
TATGAGAGATTAGATAATTTAGAAGAAGTTAATTTAAATAATTTTAAATTTGAAGTTTCTGAACTTAAAAAATTTGATTT
GAAGGTTAAAAATAAGTTTATAACTGGTTCTCCAATTGTTTTATACAAGGATAAAGATAGAGGAGAGTATATAAAGTTTT
ATGATGATGATTTTGATTTGATGTTTTTTGTTCAAAGACTGCAGGATAATGCAGTTAAAAAATATAAAGCATTTTATAAT
GAAGAGCCAGTTTTAAATGGTTTTATTTTTGATAGAATATCTCCAAGAGTTAGGAATGGGAGGGTAGATGTTTATGTTAG
GATTGCTAAGAAGGGAAGAGAGTTTTTAGTAGTTGGAACTACATGGAAGTTATTAGAGAAGATTAAAATTAGAAAAGAAG
AGAGGAAGTTTTACAAGTTTATAATGGATTGTGGTTTGGGAGAGAAGAATAGTTTAGGCTTCGGATTCATAAATCCTATA
AAATAA

Upstream 100 bases:

>100_bases
TGAGGCAATTATAGAAGGAAAATCATTAGAAGAAAAAGCAGAAGAAGTTGCAGAGCTAAAAAAGGCTTTAGAGTATTGGA
AATAAATAAAAGGGAGACTT

Downstream 100 bases:

>100_bases
GTTTGAATATTTGATTTTATAAAATGCATAAGAAAAGTTTTTATTTTTTGAAGTAATAAGTTATTTAGATTTTGTTTTTA
AAGATTTTTGACCAATATTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 241; Mature: 241

Protein sequence:

>241_residues
MRLKLSLTPKQDFSFDKINKHTIQGFIYSLLKDTEFGEMHNQPRFKFWCFSDIFPPNDFVKGEDKYLLISSPREEFINVL
YERLDNLEEVNLNNFKFEVSELKKFDLKVKNKFITGSPIVLYKDKDRGEYIKFYDDDFDLMFFVQRLQDNAVKKYKAFYN
EEPVLNGFIFDRISPRVRNGRVDVYVRIAKKGREFLVVGTTWKLLEKIKIRKEERKFYKFIMDCGLGEKNSLGFGFINPI
K

Sequences:

>Translated_241_residues
MRLKLSLTPKQDFSFDKINKHTIQGFIYSLLKDTEFGEMHNQPRFKFWCFSDIFPPNDFVKGEDKYLLISSPREEFINVL
YERLDNLEEVNLNNFKFEVSELKKFDLKVKNKFITGSPIVLYKDKDRGEYIKFYDDDFDLMFFVQRLQDNAVKKYKAFYN
EEPVLNGFIFDRISPRVRNGRVDVYVRIAKKGREFLVVGTTWKLLEKIKIRKEERKFYKFIMDCGLGEKNSLGFGFINPI
K
>Mature_241_residues
MRLKLSLTPKQDFSFDKINKHTIQGFIYSLLKDTEFGEMHNQPRFKFWCFSDIFPPNDFVKGEDKYLLISSPREEFINVL
YERLDNLEEVNLNNFKFEVSELKKFDLKVKNKFITGSPIVLYKDKDRGEYIKFYDDDFDLMFFVQRLQDNAVKKYKAFYN
EEPVLNGFIFDRISPRVRNGRVDVYVRIAKKGREFLVVGTTWKLLEKIKIRKEERKFYKFIMDCGLGEKNSLGFGFINPI
K

Specific function: Unknown

COG id: COG1583

COG function: function code L; Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To M.jannaschii MJ0375

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1234_METJA (Q58631)

Other databases:

- EMBL:   L77117
- PIR:   A64454
- RefSeq:   NP_248229.1
- ProteinModelPortal:   Q58631
- GeneID:   1452130
- GenomeReviews:   L77117_GR
- KEGG:   mja:MJ_1234
- NMPDR:   fig|243232.1.peg.1266
- TIGR:   MJ1234
- HOGENOM:   HBG645616
- OMA:   NIGEMPF
- ProtClustDB:   CLSK507087
- BioCyc:   MJAN243232:MJ_1234-MONOMER
- InterPro:   IPR010156
- InterPro:   IPR002743
- TIGRFAMs:   TIGR01877

Pfam domain/function: PF01881 DUF57

EC number: NA

Molecular weight: Translated: 28841; Mature: 28841

Theoretical pI: Translated: 9.71; Mature: 9.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLKLSLTPKQDFSFDKINKHTIQGFIYSLLKDTEFGEMHNQPRFKFWCFSDIFPPNDFV
CEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCEEEEEECCCCCCCCCC
KGEDKYLLISSPREEFINVLYERLDNLEEVNLNNFKFEVSELKKFDLKVKNKFITGSPIV
CCCCCEEEEECCHHHHHHHHHHHHCCHHHCCCCCEEEEHHHHHHHHHEEECEEECCCCEE
LYKDKDRGEYIKFYDDDFDLMFFVQRLQDNAVKKYKAFYNEEPVLNGFIFDRISPRVRNG
EEEECCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEHHCCCCCCCCC
RVDVYVRIAKKGREFLVVGTTWKLLEKIKIRKEERKFYKFIMDCGLGEKNSLGFGFINPI
EEEEEEEEECCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
K
C
>Mature Secondary Structure
MRLKLSLTPKQDFSFDKINKHTIQGFIYSLLKDTEFGEMHNQPRFKFWCFSDIFPPNDFV
CEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCEEEEEECCCCCCCCCC
KGEDKYLLISSPREEFINVLYERLDNLEEVNLNNFKFEVSELKKFDLKVKNKFITGSPIV
CCCCCEEEEECCHHHHHHHHHHHHCCHHHCCCCCEEEEHHHHHHHHHEEECEEECCCCEE
LYKDKDRGEYIKFYDDDFDLMFFVQRLQDNAVKKYKAFYNEEPVLNGFIFDRISPRVRNG
EEEECCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEHHCCCCCCCCC
RVDVYVRIAKKGREFLVVGTTWKLLEKIKIRKEERKFYKFIMDCGLGEKNSLGFGFINPI
EEEEEEEEECCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
K
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087