| Definition | Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome. |
|---|---|
| Accession | NC_000909 |
| Length | 1,664,970 |
Click here to switch to the map view.
The map label for this gene is 15669406
Identifier: 15669406
GI number: 15669406
Start: 1164059
End: 1164958
Strand: Direct
Name: 15669406
Synonym: MJ1221
Alternate gene names: NA
Gene position: 1164059-1164958 (Clockwise)
Preceding gene: 15669394
Following gene: 15669410
Centisome position: 69.91
GC content: 32.56
Gene sequence:
>900_bases TTGTGGTTTGGTGAGAGAATGAGATACATGAAAATCATCATTCCAAAAAAATTCCTAAATACTGTTGAGGAAATTTTAAA AAAGAACAATGCCTACTCAATATCAATAATTGAACCATTAAAGACATCAATTGAAGATGGAATCATCATAACATGCAACG CAGATGCAAGAGATGCAGAAAAAATAGTTTTAGAATTAAAAAAATTAGGTTTAGGAGAGAAAGGTCATGGAAGTGTGACA ATAATGCCAGCAAACATAACATTCTCATGTAGGGAGGAGGGAATAGCTTCAACAAGCTTGTCTCCTTTAGAACTCTACTA CAAAGCAAAAACTATGGTTAAAATTACGAAAAATGTTATAATTAAAGTTATATTGGCAAGTATCATGGGAGTTATTGGAT TGATAGAGCATAATATTCCAACATTAATTGGGGCGATGATTATAGCACCTTTAGTTGATACAGTTATGGGAAGTGCCATA GGAACAGTATTGGGAGATAAAGAGTTATTCATCCAAGGGATGAAAAAAGAACTCCTCTGCTCTGGGATTGTTATAGTTTG TGCATTTATTCCAAGTTTGTTTTTTGTTTCAAAAGAGTTGGTTTTACAGTATCTATCAGAGACATCAATAATATTGAGTG CTATTGTTGCAATTATTGCAGGTATTTCAGGGGGAATGAGTATTGCAAGCGGAAAGGAGTATGAAATCATTGGAGTTACA ATTGATGTTTCAATATTAATCCCAGCTTTATTAATGGGCATGGCTTTAGCTACCATGGACTTATATCTGATTTATATAAC CTTCATTCTGTTGGCTATAAACATAGTGTTATTAGATGTTGGTGGCTACATTGGCTTAAAATACAAAGTTGGAAAGATAA ATCAAAAAATAAAATATTAA
Upstream 100 bases:
>100_bases AAAACCTTGGTTCAACATTTCTAAGTTTCAAGGTATCACCAACTTAGATAGTTATTTTAATGTTTTCACTATGTAATTGG ATGTAGGGTGTATATAAAGG
Downstream 100 bases:
>100_bases AAACTCTTATTTTTCCATTTTAAAAAATCTTCTGCATAATCAACTTAAATAAAATTTTAAACCCAGTTATTACATTAGTT CCTCTACTCATCGAATATTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 299; Mature: 299
Protein sequence:
>299_residues MWFGERMRYMKIIIPKKFLNTVEEILKKNNAYSISIIEPLKTSIEDGIIITCNADARDAEKIVLELKKLGLGEKGHGSVT IMPANITFSCREEGIASTSLSPLELYYKAKTMVKITKNVIIKVILASIMGVIGLIEHNIPTLIGAMIIAPLVDTVMGSAI GTVLGDKELFIQGMKKELLCSGIVIVCAFIPSLFFVSKELVLQYLSETSIILSAIVAIIAGISGGMSIASGKEYEIIGVT IDVSILIPALLMGMALATMDLYLIYITFILLAINIVLLDVGGYIGLKYKVGKINQKIKY
Sequences:
>Translated_299_residues MWFGERMRYMKIIIPKKFLNTVEEILKKNNAYSISIIEPLKTSIEDGIIITCNADARDAEKIVLELKKLGLGEKGHGSVT IMPANITFSCREEGIASTSLSPLELYYKAKTMVKITKNVIIKVILASIMGVIGLIEHNIPTLIGAMIIAPLVDTVMGSAI GTVLGDKELFIQGMKKELLCSGIVIVCAFIPSLFFVSKELVLQYLSETSIILSAIVAIIAGISGGMSIASGKEYEIIGVT IDVSILIPALLMGMALATMDLYLIYITFILLAINIVLLDVGGYIGLKYKVGKINQKIKY >Mature_299_residues MWFGERMRYMKIIIPKKFLNTVEEILKKNNAYSISIIEPLKTSIEDGIIITCNADARDAEKIVLELKKLGLGEKGHGSVT IMPANITFSCREEGIASTSLSPLELYYKAKTMVKITKNVIIKVILASIMGVIGLIEHNIPTLIGAMIIAPLVDTVMGSAI GTVLGDKELFIQGMKKELLCSGIVIVCAFIPSLFFVSKELVLQYLSETSIILSAIVAIIAGISGGMSIASGKEYEIIGVT IDVSILIPALLMGMALATMDLYLIYITFILLAINIVLLDVGGYIGLKYKVGKINQKIKY
Specific function: Unknown
COG id: COG1808
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential)
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.jannaschii MJ0678
Homologues:
Organism=Drosophila melanogaster, GI20129117, Length=168, Percent_Identity=26.7857142857143, Blast_Score=67, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y1221_METJA (Q58618)
Other databases:
- EMBL: L77117 - PIR: D64452 - RefSeq: NP_248216.1 - ProteinModelPortal: Q58618 - GeneID: 1452117 - GenomeReviews: L77117_GR - KEGG: mja:MJ_1221 - NMPDR: fig|243232.1.peg.1253 - TIGR: MJ1221 - OMA: TIMPANI - ProtClustDB: CLSK2517703 - BioCyc: MJAN243232:MJ_1221-MONOMER - InterPro: IPR005233 - InterPro: IPR013031 - InterPro: IPR005240 - TIGRFAMs: TIGR00271 - TIGRFAMs: TIGR00341
Pfam domain/function: PF04087 DUF389
EC number: NA
Molecular weight: Translated: 32539; Mature: 32539
Theoretical pI: Translated: 8.55; Mature: 8.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0xe4528bc)-; HASH(0xe17fe78)-; HASH(0xe49eb30)-; HASH(0xd28b940)-; HASH(0xcade5d0)-;
Cys/Met content:
1.3 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWFGERMRYMKIIIPKKFLNTVEEILKKNNAYSISIIEPLKTSIEDGIIITCNADARDAE CCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEEEEHHHHHHHCCCEEEEECCCCCHHH KIVLELKKLGLGEKGHGSVTIMPANITFSCREEGIASTSLSPLELYYKAKTMVKITKNVI HHHHHHHHHCCCCCCCCCEEEEECCEEEECHHCCCCCCCCCHHHHHHHHHHHHHHHHHHH IKVILASIMGVIGLIEHNIPTLIGAMIIAPLVDTVMGSAIGTVLGDKELFIQGMKKELLC HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH SGIVIVCAFIPSLFFVSKELVLQYLSETSIILSAIVAIIAGISGGMSIASGKEYEIIGVT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEE IDVSILIPALLMGMALATMDLYLIYITFILLAINIVLLDVGGYIGLKYKVGKINQKIKY EEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCH >Mature Secondary Structure MWFGERMRYMKIIIPKKFLNTVEEILKKNNAYSISIIEPLKTSIEDGIIITCNADARDAE CCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEEEEHHHHHHHCCCEEEEECCCCCHHH KIVLELKKLGLGEKGHGSVTIMPANITFSCREEGIASTSLSPLELYYKAKTMVKITKNVI HHHHHHHHHCCCCCCCCCEEEEECCEEEECHHCCCCCCCCCHHHHHHHHHHHHHHHHHHH IKVILASIMGVIGLIEHNIPTLIGAMIIAPLVDTVMGSAIGTVLGDKELFIQGMKKELLC HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH SGIVIVCAFIPSLFFVSKELVLQYLSETSIILSAIVAIIAGISGGMSIASGKEYEIIGVT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEE IDVSILIPALLMGMALATMDLYLIYITFILLAINIVLLDVGGYIGLKYKVGKINQKIKY EEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCH
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8688087