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The map label for this gene is 15669353

Identifier: 15669353

GI number: 15669353

Start: 1105089

End: 1106045

Strand: Reverse

Name: 15669353

Synonym: MJ1164

Alternate gene names: NA

Gene position: 1106045-1105089 (Counterclockwise)

Preceding gene: 15669363

Following gene: 15669351

Centisome position: 66.43

GC content: 31.66

Gene sequence:

>957_bases
GTGATGATTATGAGAGAGATTCTAATATCCGAATGTATAGAATTATTAAGATCACATAAATTCATCGTCTCAAAACCACT
GGGAAGAAGTTGCTTTGATATGGTAGCAAGTAAAGAGGATATTAGATTAATTTTAAAAATTTTAAAGAATATAGACAGTT
TAAGTAGAGATCAATCAAAAGAATTAAAGAAGATTAGCAAAATACTGCATGGGACTCCTTTAATAATAGGCATTAGAACA
AGAAACGCCCCTATGGAGCATGGAGTTGTTTATGACAGATATAATATAAAAGCAGTGACTTTTGAAACGTTCAGAGATTA
TTTAGAAGGAAGCCCACCAATGGTTTATGCAAATAGAGGAGGATTTTTTGTAAAGATAGATGGGAAGGTGTTGAAAGAAG
TTAGAGAGGCTATGGGTATCTCAGTAGGAAAGTTGGCAGAAGTTGCTGGTGTTTCAAGAAAGGCAATCTATAAATATGAA
ACTCAGATGGCAAATCCTTCAGTAGATGTGGCTTTAAAAATTGAGGAGTTCTTAGATGTGCCGTTAGTTAAAGGTATTGA
TTTATTTGAGCCTGTTGATGATGAGGATGTTGAAAATAAATTAGAAAATTTAGAAGATTTTAAGAAAGAGGCGATAAATT
TTCTAAACGAATTAGGATTTAAATCATTTGTTGTTGAAAAGGCTCCATTTGATGCAGTAGCTGAGAAGGATATGGATAAC
AATCTAAATATTCTATTAACAAATATTGAAGAAAAAGATAATGAAGAAGTAAAGAGAAAGGCGTTATTCGTGAGAGAATT
GTCAAGGTTATTAGATGGATATTCACTATTAATATTGGAAGAAAAAGAGAAAGAGTATAAAAACTTGCCAGTTGTTAGTA
TTGAAGAGTTAAAAAAGATGGATGATGCCCTTGAGTTGATTGAGCATATAAAATCCATGTTAAGAGATATAAGATAA

Upstream 100 bases:

>100_bases
CTATTTTTGGTAGAAAAGCTTTATATTGGTAAAGCTAATAATATAAAAATACAACCATAAAAAATAAATATTATAATGAT
TTAGATTAGAAGAATTTACG

Downstream 100 bases:

>100_bases
ATTTAAAAAATTGATGATTTAAAAAGTAAATTACGGAAATTTTTTGTACATTTGTTTTCTATGTAAAACTCTATAAAACA
CGATTTTTTCATTTTCATAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 318; Mature: 318

Protein sequence:

>318_residues
MMIMREILISECIELLRSHKFIVSKPLGRSCFDMVASKEDIRLILKILKNIDSLSRDQSKELKKISKILHGTPLIIGIRT
RNAPMEHGVVYDRYNIKAVTFETFRDYLEGSPPMVYANRGGFFVKIDGKVLKEVREAMGISVGKLAEVAGVSRKAIYKYE
TQMANPSVDVALKIEEFLDVPLVKGIDLFEPVDDEDVENKLENLEDFKKEAINFLNELGFKSFVVEKAPFDAVAEKDMDN
NLNILLTNIEEKDNEEVKRKALFVRELSRLLDGYSLLILEEKEKEYKNLPVVSIEELKKMDDALELIEHIKSMLRDIR

Sequences:

>Translated_318_residues
MMIMREILISECIELLRSHKFIVSKPLGRSCFDMVASKEDIRLILKILKNIDSLSRDQSKELKKISKILHGTPLIIGIRT
RNAPMEHGVVYDRYNIKAVTFETFRDYLEGSPPMVYANRGGFFVKIDGKVLKEVREAMGISVGKLAEVAGVSRKAIYKYE
TQMANPSVDVALKIEEFLDVPLVKGIDLFEPVDDEDVENKLENLEDFKKEAINFLNELGFKSFVVEKAPFDAVAEKDMDN
NLNILLTNIEEKDNEEVKRKALFVRELSRLLDGYSLLILEEKEKEYKNLPVVSIEELKKMDDALELIEHIKSMLRDIR
>Mature_318_residues
MMIMREILISECIELLRSHKFIVSKPLGRSCFDMVASKEDIRLILKILKNIDSLSRDQSKELKKISKILHGTPLIIGIRT
RNAPMEHGVVYDRYNIKAVTFETFRDYLEGSPPMVYANRGGFFVKIDGKVLKEVREAMGISVGKLAEVAGVSRKAIYKYE
TQMANPSVDVALKIEEFLDVPLVKGIDLFEPVDDEDVENKLENLEDFKKEAINFLNELGFKSFVVEKAPFDAVAEKDMDN
NLNILLTNIEEKDNEEVKRKALFVRELSRLLDGYSLLILEEKEKEYKNLPVVSIEELKKMDDALELIEHIKSMLRDIR

Specific function: Unknown

COG id: COG1395

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH cro/C1-type DNA-binding domain

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1164_METJA (Q58564)

Other databases:

- EMBL:   L77117
- PIR:   C64445
- RefSeq:   NP_248158.1
- ProteinModelPortal:   Q58564
- SMR:   Q58564
- GeneID:   1452062
- GenomeReviews:   L77117_GR
- KEGG:   mja:MJ_1164
- NMPDR:   fig|243232.1.peg.1195
- TIGR:   MJ1164
- HOGENOM:   HBG626911
- OMA:   YERFGIY
- ProtClustDB:   PRK04140
- BioCyc:   MJAN243232:MJ_1164-MONOMER
- HAMAP:   MF_00584
- InterPro:   IPR001387
- InterPro:   IPR020886
- InterPro:   IPR010982
- SMART:   SM00530

Pfam domain/function: PF01381 HTH_3; SSF47413 Lambda_like_DNA

EC number: NA

Molecular weight: Translated: 36530; Mature: 36530

Theoretical pI: Translated: 5.15; Mature: 5.15

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMIMREILISECIELLRSHKFIVSKPLGRSCFDMVASKEDIRLILKILKNIDSLSRDQSK
CHHHHHHHHHHHHHHHHCCCHHHCCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHCCHHHH
ELKKISKILHGTPLIIGIRTRNAPMEHGVVYDRYNIKAVTFETFRDYLEGSPPMVYANRG
HHHHHHHHHCCCCEEEEEECCCCCCCCCEEEECCCEEEEEHHHHHHHHCCCCCEEEECCC
GFFVKIDGKVLKEVREAMGISVGKLAEVAGVSRKAIYKYETQMANPSVDVALKIEEFLDV
CEEEEECHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHCCCCCCEEEEEHHHHHCC
PLVKGIDLFEPVDDEDVENKLENLEDFKKEAINFLNELGFKSFVVEKAPFDAVAEKDMDN
HHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCHHHHHHCCCCC
NLNILLTNIEEKDNEEVKRKALFVRELSRLLDGYSLLILEEKEKEYKNLPVVSIEELKKM
CCEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHCCCCEEHHHHHHH
DDALELIEHIKSMLRDIR
HHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MMIMREILISECIELLRSHKFIVSKPLGRSCFDMVASKEDIRLILKILKNIDSLSRDQSK
CHHHHHHHHHHHHHHHHCCCHHHCCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHCCHHHH
ELKKISKILHGTPLIIGIRTRNAPMEHGVVYDRYNIKAVTFETFRDYLEGSPPMVYANRG
HHHHHHHHHCCCCEEEEEECCCCCCCCCEEEECCCEEEEEHHHHHHHHCCCCCEEEECCC
GFFVKIDGKVLKEVREAMGISVGKLAEVAGVSRKAIYKYETQMANPSVDVALKIEEFLDV
CEEEEECHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHCCCCCCEEEEEHHHHHCC
PLVKGIDLFEPVDDEDVENKLENLEDFKKEAINFLNELGFKSFVVEKAPFDAVAEKDMDN
HHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCHHHHHHCCCCC
NLNILLTNIEEKDNEEVKRKALFVRELSRLLDGYSLLILEEKEKEYKNLPVVSIEELKKM
CCEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHCCCCEEHHHHHHH
DDALELIEHIKSMLRDIR
HHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087