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The map label for this gene is 15669308

Identifier: 15669308

GI number: 15669308

Start: 1061245

End: 1061529

Strand: Reverse

Name: 15669308

Synonym: MJ1121

Alternate gene names: NA

Gene position: 1061529-1061245 (Counterclockwise)

Preceding gene: 15669309

Following gene: 15669303

Centisome position: 63.76

GC content: 24.56

Gene sequence:

>285_bases
ATGGATGCAGTCATTGATACAAGTGTAATAATAGAGATATTTAGAGGAAATAAAGATACTCTATATCAAATTTGTGATTA
CAACTGTAAAATAACATCCATAACAGTTTTTGAGTTATATTGTGGTAATCTAAAAGAAAATGAAATGATAATGATTGACA
GCTTACCAAAACTAAATTTTGATGATAAATCATCAAAGATTGCTGGCAATATATTTAAAAAACTAAAAAAAGAAGGCAAA
ATTCCATCAGTAAAAGATTTATTAATTGCGTCAATATTTTATTAA

Upstream 100 bases:

>100_bases
AGAGAAAGAGAAAAAACTTGGATGTTTTTATGATTGCCTTTGGTTCAAGAAGTGAGGAGGATGTAGAAAAATTAAAAAAA
GAACTTAAAGAGGCAGAAAA

Downstream 100 bases:

>100_bases
CCTACGATAATGATTTTAAAATGTTTGAAAAGTTCGGCTTAAGAGTGAAGATTTTATAAATAATTTAATTCAAATTTTAA
AACCCAATTTTTTTATTTTT

Product: virulence associated protein C VapC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 94; Mature: 94

Protein sequence:

>94_residues
MDAVIDTSVIIEIFRGNKDTLYQICDYNCKITSITVFELYCGNLKENEMIMIDSLPKLNFDDKSSKIAGNIFKKLKKEGK
IPSVKDLLIASIFY

Sequences:

>Translated_94_residues
MDAVIDTSVIIEIFRGNKDTLYQICDYNCKITSITVFELYCGNLKENEMIMIDSLPKLNFDDKSSKIAGNIFKKLKKEGK
IPSVKDLLIASIFY
>Mature_94_residues
MDAVIDTSVIIEIFRGNKDTLYQICDYNCKITSITVFELYCGNLKENEMIMIDSLPKLNFDDKSSKIAGNIFKKLKKEGK
IPSVKDLLIASIFY

Specific function: Unknown

COG id: COG1487

COG function: function code R; Predicted nucleic acid-binding protein, contains PIN domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To A.fulgidus AF1996

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1121_METJA (Q58521)

Other databases:

- EMBL:   L77117
- PIR:   H64439
- RefSeq:   NP_248113.1
- ProteinModelPortal:   Q58521
- GeneID:   1452017
- GenomeReviews:   L77117_GR
- KEGG:   mja:MJ_1121
- NMPDR:   fig|243232.1.peg.1150
- TIGR:   MJ1121
- HOGENOM:   HBG705734
- OMA:   ERFKEYG
- ProtClustDB:   CLSK2749960
- BioCyc:   MJAN243232:MJ_1121-MONOMER

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10719; Mature: 10719

Theoretical pI: Translated: 6.54; Mature: 6.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.2 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
3.2 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
6.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDAVIDTSVIIEIFRGNKDTLYQICDYNCKITSITVFELYCGNLKENEMIMIDSLPKLNF
CCCCHHHHHHHHHHCCCCCCEEHCCCCCCEEEEEEEEEEECCCCCCCCEEEEECCCCCCC
DDKSSKIAGNIFKKLKKEGKIPSVKDLLIASIFY
CCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHCC
>Mature Secondary Structure
MDAVIDTSVIIEIFRGNKDTLYQICDYNCKITSITVFELYCGNLKENEMIMIDSLPKLNF
CCCCHHHHHHHHHHCCCCCCEEHCCCCCCEEEEEEEEEEECCCCCCCCEEEEECCCCCCC
DDKSSKIAGNIFKKLKKEGKIPSVKDLLIASIFY
CCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087