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The map label for this gene is yfbE [C]

Identifier: 15669255

GI number: 15669255

Start: 1006926

End: 1008086

Strand: Reverse

Name: yfbE [C]

Synonym: MJ1066

Alternate gene names: 15669255

Gene position: 1008086-1006926 (Counterclockwise)

Preceding gene: 15669256

Following gene: 15669254

Centisome position: 60.55

GC content: 32.73

Gene sequence:

>1161_bases
ATGATAAGAGAAAGTTTTTTGCCACCATTTAGGCCATGTATTGGTGAAGAAGAGATAAATGAAGTTATAGATACATTAAA
GTCAGATTGGATAACTATGGGTCCAAAAACATTAAAATTTGAAGAATTGTTTAGAAATTATATTGGAAGTAAATTTGCAA
TATCCTTAAATTCATGCACAGCCGGGTTACATCTGTCATTGGTTGCATTAAATATAAAGGATAAAGATGAAGTCATAACT
ACACCATATACCTTTGCAGCAACTGGGAACGTTATAGTTCATCAAAGGGCAAAGCCCGTATTTGTTGATATTGATAAAGA
AACCTATAATATTAACGTTGAGGAGATAGAAAATGCCATAACTGAGAGAACAAAGGCAATAATTCCTGTCCATTATGCAG
GACATCCATGTGAAATGGATGAAATATTAAAAATAGCAAGAGACTATGATTTATATGTAATTGAAGATGCTGCACATGCA
TTGGGGGCAGAGTATAAAGGAAAAAAAATAGGTACTATTGGAGATACAACATCATTCAGCTTTTATGCAACAAAAAATAT
AACCACTGGGGAGGGGGGAATGGTTACTACTGACAATGAAGAGATTGCAGAAAAAATAAAAATACTGCGACTACATGGGA
TAAGTAGAGACGCTTGGAAAAGATACTCATCCGAGGGCTCATGGTACTATGAGATTATCGAGTGTGGTTATAAATATAAC
ATGACCGACATTCAAGCATCAATCGGAATACATCAACTAAAAAAAGCAGAGATAATGAGAAAAAGAAGAGAAGAAATCGC
TAAAATTTATAATGAAGAGTTTGAAAATCTTGAGGGGTTAATAACTCCAACCATAAAAAAACATGTTAAACATGCATGGC
ACTTATATCCGTTGTTAATAAATATCGATAGATTGAAGATAAACAGAACCAAATTTATTGAAGAGTTAAAAAAACAGAAT
ATTGGAACAAGTGTTCATTTTATCCCATTACACTTGCATCCATTTTATAGGAAAACTTTTGGATATAAAAAAGGTGATTT
TCCAAATGCAGAGTGGGTTTATGAGAGAGAGATTTCCTTGCCAATATATCCAAAAATGACTGATGATGATGTAATTGATG
TAGTTAATGCGGTTAAAAAAATTGTTTCTGAGAACAGATGA

Upstream 100 bases:

>100_bases
GTTTATTTTGGAATATATATATTAGGAATTTTTGGGCTTAAGATAATAAATATATATGAGGTTAAGGATATTATCTCCAA
GATTATAAAAAGGTGAGTAA

Downstream 100 bases:

>100_bases
GGATGATATTATGGAAAAGATAAAAATTGGAGATAGATATGTTGGTAAAGGTGAGCCAACATTTATTATTGCAGAGGGGG
GATTAAATCACAATGGGGAT

Product: spore coat polysaccharide biosynthesis protein SpsC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 386; Mature: 386

Protein sequence:

>386_residues
MIRESFLPPFRPCIGEEEINEVIDTLKSDWITMGPKTLKFEELFRNYIGSKFAISLNSCTAGLHLSLVALNIKDKDEVIT
TPYTFAATGNVIVHQRAKPVFVDIDKETYNINVEEIENAITERTKAIIPVHYAGHPCEMDEILKIARDYDLYVIEDAAHA
LGAEYKGKKIGTIGDTTSFSFYATKNITTGEGGMVTTDNEEIAEKIKILRLHGISRDAWKRYSSEGSWYYEIIECGYKYN
MTDIQASIGIHQLKKAEIMRKRREEIAKIYNEEFENLEGLITPTIKKHVKHAWHLYPLLINIDRLKINRTKFIEELKKQN
IGTSVHFIPLHLHPFYRKTFGYKKGDFPNAEWVYEREISLPIYPKMTDDDVIDVVNAVKKIVSENR

Sequences:

>Translated_386_residues
MIRESFLPPFRPCIGEEEINEVIDTLKSDWITMGPKTLKFEELFRNYIGSKFAISLNSCTAGLHLSLVALNIKDKDEVIT
TPYTFAATGNVIVHQRAKPVFVDIDKETYNINVEEIENAITERTKAIIPVHYAGHPCEMDEILKIARDYDLYVIEDAAHA
LGAEYKGKKIGTIGDTTSFSFYATKNITTGEGGMVTTDNEEIAEKIKILRLHGISRDAWKRYSSEGSWYYEIIECGYKYN
MTDIQASIGIHQLKKAEIMRKRREEIAKIYNEEFENLEGLITPTIKKHVKHAWHLYPLLINIDRLKINRTKFIEELKKQN
IGTSVHFIPLHLHPFYRKTFGYKKGDFPNAEWVYEREISLPIYPKMTDDDVIDVVNAVKKIVSENR
>Mature_386_residues
MIRESFLPPFRPCIGEEEINEVIDTLKSDWITMGPKTLKFEELFRNYIGSKFAISLNSCTAGLHLSLVALNIKDKDEVIT
TPYTFAATGNVIVHQRAKPVFVDIDKETYNINVEEIENAITERTKAIIPVHYAGHPCEMDEILKIARDYDLYVIEDAAHA
LGAEYKGKKIGTIGDTTSFSFYATKNITTGEGGMVTTDNEEIAEKIKILRLHGISRDAWKRYSSEGSWYYEIIECGYKYN
MTDIQASIGIHQLKKAEIMRKRREEIAKIYNEEFENLEGLITPTIKKHVKHAWHLYPLLINIDRLKINRTKFIEELKKQN
IGTSVHFIPLHLHPFYRKTFGYKKGDFPNAEWVYEREISLPIYPKMTDDDVIDVVNAVKKIVSENR

Specific function: Unknown

COG id: COG0399

COG function: function code M; Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the degT/dnrJ/eryC1 family

Homologues:

Organism=Escherichia coli, GI145693159, Length=384, Percent_Identity=43.4895833333333, Blast_Score=312, Evalue=2e-86,
Organism=Escherichia coli, GI2367285, Length=339, Percent_Identity=35.3982300884956, Blast_Score=183, Evalue=1e-47,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1066_METJA (Q58466)

Other databases:

- EMBL:   L77117
- PIR:   A64433
- RefSeq:   NP_248060.1
- ProteinModelPortal:   Q58466
- SMR:   Q58466
- GeneID:   1451963
- GenomeReviews:   L77117_GR
- KEGG:   mja:MJ_1066
- NMPDR:   fig|243232.1.peg.1097
- TIGR:   MJ1066
- HOGENOM:   HBG660897
- OMA:   YNMMDIQ
- BioCyc:   MJAN243232:MJ_1066-MONOMER
- InterPro:   IPR000653
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR015422
- Gene3D:   G3DSA:3.40.640.10
- Gene3D:   G3DSA:3.90.1150.10
- PIRSF:   PIRSF000390

Pfam domain/function: PF01041 DegT_DnrJ_EryC1; SSF53383 PyrdxlP-dep_Trfase_major

EC number: NA

Molecular weight: Translated: 44502; Mature: 44502

Theoretical pI: Translated: 6.71; Mature: 6.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRESFLPPFRPCIGEEEINEVIDTLKSDWITMGPKTLKFEELFRNYIGSKFAISLNSCT
CCCCCCCCCHHHCCCHHHHHHHHHHHHCCCEECCCCCCCHHHHHHHHCCCEEEEEECCCC
AGLHLSLVALNIKDKDEVITTPYTFAATGNVIVHQRAKPVFVDIDKETYNINVEEIENAI
CCEEEEEEEEEECCCCCEEECCEEEEECCCEEEEECCCCEEEEECCCEEECCHHHHHHHH
TERTKAIIPVHYAGHPCEMDEILKIARDYDLYVIEDAAHALGAEYKGKKIGTIGDTTSFS
HHHHHEEEEEEECCCCCCHHHHHHHHCCCCEEEECCHHHHCCCCCCCCEECCCCCCCCEE
FYATKNITTGEGGMVTTDNEEIAEKIKILRLHGISRDAWKRYSSEGSWYYEIIECGYKYN
EEEECCEECCCCCEEECCCHHHHHHHHHHHCCCCCHHHHHHHCCCCCEEEEEEECCCCCC
MTDIQASIGIHQLKKAEIMRKRREEIAKIYNEEFENLEGLITPTIKKHVKHAWHLYPLLI
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHEEEEE
NIDRLKINRTKFIEELKKQNIGTSVHFIPLHLHPFYRKTFGYKKGDFPNAEWVYEREISL
EEEHEEECHHHHHHHHHHCCCCCEEEEEEEEECHHHHHHCCCCCCCCCCCCEEEEEECCC
PIYPKMTDDDVIDVVNAVKKIVSENR
CCCCCCCCHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MIRESFLPPFRPCIGEEEINEVIDTLKSDWITMGPKTLKFEELFRNYIGSKFAISLNSCT
CCCCCCCCCHHHCCCHHHHHHHHHHHHCCCEECCCCCCCHHHHHHHHCCCEEEEEECCCC
AGLHLSLVALNIKDKDEVITTPYTFAATGNVIVHQRAKPVFVDIDKETYNINVEEIENAI
CCEEEEEEEEEECCCCCEEECCEEEEECCCEEEEECCCCEEEEECCCEEECCHHHHHHHH
TERTKAIIPVHYAGHPCEMDEILKIARDYDLYVIEDAAHALGAEYKGKKIGTIGDTTSFS
HHHHHEEEEEEECCCCCCHHHHHHHHCCCCEEEECCHHHHCCCCCCCCEECCCCCCCCEE
FYATKNITTGEGGMVTTDNEEIAEKIKILRLHGISRDAWKRYSSEGSWYYEIIECGYKYN
EEEECCEECCCCCEEECCCHHHHHHHHHHHCCCCCHHHHHHHCCCCCEEEEEEECCCCCC
MTDIQASIGIHQLKKAEIMRKRREEIAKIYNEEFENLEGLITPTIKKHVKHAWHLYPLLI
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHEEEEE
NIDRLKINRTKFIEELKKQNIGTSVHFIPLHLHPFYRKTFGYKKGDFPNAEWVYEREISL
EEEHEEECHHHHHHHHHHCCCCCEEEEEEEEECHHHHHHCCCCCCCCCCCCEEEEEECCC
PIYPKMTDDDVIDVVNAVKKIVSENR
CCCCCCCCHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087