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The map label for this gene is recJ

Identifier: 15669167

GI number: 15669167

Start: 909593

End: 911002

Strand: Direct

Name: recJ

Synonym: MJ0977

Alternate gene names: 15669167

Gene position: 909593-911002 (Clockwise)

Preceding gene: 15669166

Following gene: 15669168

Centisome position: 54.63

GC content: 33.05

Gene sequence:

>1410_bases
ATGGAAAATTGGGTAGAATTGAAAAAAGGAGCTAAGGTATTGCAAAACAACAAAAACAACAAAATTTTGATAGTTACCCA
TATAGATACTGATGGGCTAACATCAAGAGCTATTTTACAAAAATTGGCTGAGAGATTAAACTTGGATGCTGATTTCATGT
TTTTGAAGCAAATTACTATAGAGACAATAAATGACATTCCATTTAAAGACTATGATTTAATAATCTTTGCTGACTTAGGT
AGTGGGCAGTTAAAGATGATTAAAGAGAAGTTAGATGAACTCAACTTATCTGATAAGAGAGACAAAATTATTATCTTAGA
CCACCACCAACCAGAGGAGATAAAGATTCCAAAAACCATCATCCATATAAACCCCCTAACCATTGCAAAAAGCGGAGCTG
AAATTTGCGGAGCTGGAGTTTCATATTTATTTGCAAAAGCTATAAACAATGATTGGATTGATTTGGCTAAATATGCTGTT
TTGGGTGCTGTTGGTGATATTCAAAACATTGAGGGAAAATTAATTGGTTTGAATAGAAAAATACTATGCGATGCAATTAT
GAATGGAGATGTTAAAGTAAAAACAGATTTACAGATGTATGGTAGGCAAACAAGACCTTTATTTGTGTCTATGAGATATT
GGGCAGATGTGAGAACTGATTTATTAAATAACGATTCAAAGATAATCAAATACATCCAAAGCATAAATAAAAAGTATGAT
ATTGAAATAAACCCAACTATGAGATTAGCTGAAATTCCTTTTGAACATAAAAGGATTATTGGAAATGAGCTTTTAATAAA
ATGTCTAAACTATGTCCCAAACCACTGGACACCTTACATTCCAAAGGTTATATTTGGAGAGGTTTATGAATTTAGAGGAG
AAGAGTTTGGATCTCCATTGAGAGATTTAGAGGAGTTCTCAACGTGCATAAACGCATGTTCAAGATATGGAGATTATGAA
ACAGCTTTAAATGTGTTAATGGGAGATAGGGATAAATACTATAGAAAAATGCTCTCAAACTTAAGAAAGCATAGAAATAA
CTTAAGGGAGGCATTAGAGCATGTGAAAAATGACGTTGAGATAATTCAAAAAGATAGATTCCAATACTTTGAGACAGATA
AAATTATGTCAAATATTGTTGGGATTGTTGCTGGAATGAGTTATTCTATTGAAGAAGTGGATTGGATGAAGCCGATATTT
GCAATAACAGAGGATGAAAACGGCTATAAGGTATCCGCACGATGTCCTAAGCTATTGTGCTTTGCTGAGGATGTGAATTT
AGCCAAGGCAATAAAATATGCATCAGAAAAGGTTAATGGTAGTGGGGGAGGGCATAAATTTGCCTGTGGGGCATATATTC
CAGATAATAAAAGAGAATTTATAAAATACCTTGAGATTGCTTTGAGATAA

Upstream 100 bases:

>100_bases
TGAACTAAATGAAGCAAAGTATATTATAAACAATAAAATTAATGAATTAACTCAATCAGATAGTTCTTAAATAATTTAAA
GAAATAAACACAGTGAAACT

Downstream 100 bases:

>100_bases
AAATATTTTATGGGGATATTATGCAAATTCCAATTTTAATATGCCGTTTAAAGACAGATAAACCACTTAAAAAATCGCAA
ACACCATTTTTGAGGGGCTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 469; Mature: 469

Protein sequence:

>469_residues
MENWVELKKGAKVLQNNKNNKILIVTHIDTDGLTSRAILQKLAERLNLDADFMFLKQITIETINDIPFKDYDLIIFADLG
SGQLKMIKEKLDELNLSDKRDKIIILDHHQPEEIKIPKTIIHINPLTIAKSGAEICGAGVSYLFAKAINNDWIDLAKYAV
LGAVGDIQNIEGKLIGLNRKILCDAIMNGDVKVKTDLQMYGRQTRPLFVSMRYWADVRTDLLNNDSKIIKYIQSINKKYD
IEINPTMRLAEIPFEHKRIIGNELLIKCLNYVPNHWTPYIPKVIFGEVYEFRGEEFGSPLRDLEEFSTCINACSRYGDYE
TALNVLMGDRDKYYRKMLSNLRKHRNNLREALEHVKNDVEIIQKDRFQYFETDKIMSNIVGIVAGMSYSIEEVDWMKPIF
AITEDENGYKVSARCPKLLCFAEDVNLAKAIKYASEKVNGSGGGHKFACGAYIPDNKREFIKYLEIALR

Sequences:

>Translated_469_residues
MENWVELKKGAKVLQNNKNNKILIVTHIDTDGLTSRAILQKLAERLNLDADFMFLKQITIETINDIPFKDYDLIIFADLG
SGQLKMIKEKLDELNLSDKRDKIIILDHHQPEEIKIPKTIIHINPLTIAKSGAEICGAGVSYLFAKAINNDWIDLAKYAV
LGAVGDIQNIEGKLIGLNRKILCDAIMNGDVKVKTDLQMYGRQTRPLFVSMRYWADVRTDLLNNDSKIIKYIQSINKKYD
IEINPTMRLAEIPFEHKRIIGNELLIKCLNYVPNHWTPYIPKVIFGEVYEFRGEEFGSPLRDLEEFSTCINACSRYGDYE
TALNVLMGDRDKYYRKMLSNLRKHRNNLREALEHVKNDVEIIQKDRFQYFETDKIMSNIVGIVAGMSYSIEEVDWMKPIF
AITEDENGYKVSARCPKLLCFAEDVNLAKAIKYASEKVNGSGGGHKFACGAYIPDNKREFIKYLEIALR
>Mature_469_residues
MENWVELKKGAKVLQNNKNNKILIVTHIDTDGLTSRAILQKLAERLNLDADFMFLKQITIETINDIPFKDYDLIIFADLG
SGQLKMIKEKLDELNLSDKRDKIIILDHHQPEEIKIPKTIIHINPLTIAKSGAEICGAGVSYLFAKAINNDWIDLAKYAV
LGAVGDIQNIEGKLIGLNRKILCDAIMNGDVKVKTDLQMYGRQTRPLFVSMRYWADVRTDLLNNDSKIIKYIQSINKKYD
IEINPTMRLAEIPFEHKRIIGNELLIKCLNYVPNHWTPYIPKVIFGEVYEFRGEEFGSPLRDLEEFSTCINACSRYGDYE
TALNVLMGDRDKYYRKMLSNLRKHRNNLREALEHVKNDVEIIQKDRFQYFETDKIMSNIVGIVAGMSYSIEEVDWMKPIF
AITEDENGYKVSARCPKLLCFAEDVNLAKAIKYASEKVNGSGGGHKFACGAYIPDNKREFIKYLEIALR

Specific function: Single-stranded-DNA-specific exonuclease

COG id: COG0608

COG function: function code L; Single-stranded DNA-specific exonuclease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recJ family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RECJ_METJA (Q58387)

Other databases:

- EMBL:   L77117
- PIR:   A64422
- RefSeq:   NP_247972.1
- ProteinModelPortal:   Q58387
- GeneID:   1451875
- GenomeReviews:   L77117_GR
- KEGG:   mja:MJ_0977
- NMPDR:   fig|243232.1.peg.1009
- TIGR:   MJ0977
- HOGENOM:   HBG551289
- OMA:   EICGAGV
- ProtClustDB:   CLSK876410
- BioCyc:   MJAN243232:MJ_0977-MONOMER
- InterPro:   IPR003156
- InterPro:   IPR001667

Pfam domain/function: PF01368 DHH; PF02272 DHHA1

EC number: NA

Molecular weight: Translated: 53848; Mature: 53848

Theoretical pI: Translated: 7.49; Mature: 7.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MENWVELKKGAKVLQNNKNNKILIVTHIDTDGLTSRAILQKLAERLNLDADFMFLKQITI
CCCHHHHHHHHHHHHCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHH
ETINDIPFKDYDLIIFADLGSGQLKMIKEKLDELNLSDKRDKIIILDHHQPEEIKIPKTI
HHHCCCCCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCEECCEEE
IHINPLTIAKSGAEICGAGVSYLFAKAINNDWIDLAKYAVLGAVGDIQNIEGKLIGLNRK
EEECCCEEECCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCEEEECCHH
ILCDAIMNGDVKVKTDLQMYGRQTRPLFVSMRYWADVRTDLLNNDSKIIKYIQSINKKYD
HHHHHHCCCCEEEEECHHHHCCCCCCEEEEEHHHHHHHHHHHCCCHHHHHHHHHCCCEEE
IEINPTMRLAEIPFEHKRIIGNELLIKCLNYVPNHWTPYIPKVIFGEVYEFRGEEFGSPL
EEECCCEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCHHHCCHH
RDLEEFSTCINACSRYGDYETALNVLMGDRDKYYRKMLSNLRKHRNNLREALEHVKNDVE
HHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IIQKDRFQYFETDKIMSNIVGIVAGMSYSIEEVDWMKPIFAITEDENGYKVSARCPKLLC
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCEEEEEECCCCEEEECCCCEEEE
FAEDVNLAKAIKYASEKVNGSGGGHKFACGAYIPDNKREFIKYLEIALR
EECCCCHHHHHHHHHHHCCCCCCCCEEEECCCCCCCHHHHHHHHHHHCC
>Mature Secondary Structure
MENWVELKKGAKVLQNNKNNKILIVTHIDTDGLTSRAILQKLAERLNLDADFMFLKQITI
CCCHHHHHHHHHHHHCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHH
ETINDIPFKDYDLIIFADLGSGQLKMIKEKLDELNLSDKRDKIIILDHHQPEEIKIPKTI
HHHCCCCCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCEECCEEE
IHINPLTIAKSGAEICGAGVSYLFAKAINNDWIDLAKYAVLGAVGDIQNIEGKLIGLNRK
EEECCCEEECCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCEEEECCHH
ILCDAIMNGDVKVKTDLQMYGRQTRPLFVSMRYWADVRTDLLNNDSKIIKYIQSINKKYD
HHHHHHCCCCEEEEECHHHHCCCCCCEEEEEHHHHHHHHHHHCCCHHHHHHHHHCCCEEE
IEINPTMRLAEIPFEHKRIIGNELLIKCLNYVPNHWTPYIPKVIFGEVYEFRGEEFGSPL
EEECCCEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCHHHCCHH
RDLEEFSTCINACSRYGDYETALNVLMGDRDKYYRKMLSNLRKHRNNLREALEHVKNDVE
HHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IIQKDRFQYFETDKIMSNIVGIVAGMSYSIEEVDWMKPIFAITEDENGYKVSARCPKLLC
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCEEEEEECCCCEEEECCCCEEEE
FAEDVNLAKAIKYASEKVNGSGGGHKFACGAYIPDNKREFIKYLEIALR
EECCCCHHHHHHHHHHHCCCCCCCCEEEECCCCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087; 10633092