| Definition | Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome. |
|---|---|
| Accession | NC_000909 |
| Length | 1,664,970 |
Click here to switch to the map view.
The map label for this gene is 15669156
Identifier: 15669156
GI number: 15669156
Start: 899865
End: 901199
Strand: Direct
Name: 15669156
Synonym: MJ0966
Alternate gene names: NA
Gene position: 899865-901199 (Clockwise)
Preceding gene: 15669155
Following gene: 15669158
Centisome position: 54.05
GC content: 30.94
Gene sequence:
>1335_bases GTGATTAAAATGATAAAGAATGTTGCTATAATCTACCCAAACAAATTTAAAGCTGGGATTTCTTGCTTAGCTGTGCATGT TCTAGCTAATCATTTAAGCAAATATAGAGATTTAAATGTAGGAGTGTATTTCTTAGAGAATTATGATAGAATAAAAAATT TTGATGCAATTTTTATTACTCTACAGTATGAAAACGATTACTTTAATGCAATAAAGATAATTAAAGATTTGAGAAAAAAT AACCCAAATGCTATTTTTGTTGCTGGAGGGCCTTGTGTAATGGAAAATTTTTTCCCAATAGCTGAGTTTTTTGATGTATT TATCGTTGGAGAGATTGAGGGCAGTGATGTAATGCTAAAAGTTATAAATAGAGAGTTTGATGTTGAGGGTGTTTATTCAA AATATTTAGAGAAGGATAAAGTTAAAAGAATCTATCCAAAAAAATTAACTATAGATGATTATCCAATATATCAGCCAACC TCTGAAGAGGGAGCTTATGGAAAATCCTTCTTATTAGAGATTGGTAGAGGATGTCCAAGAAGATGTAGATTTTGCTTAGC GAGAGCTATCTATTATCCACCAAGGTTTAGAAAGCTTGATGATTTAATGTATTTAGCAGAAGAAGGAGTTAAGGTTAATA AAGTCAATAAAGTTGCTTTAATAGCCCCATCAGTTGGAGATTACAAGTATATAGTTGAGTTATGCAACTTTTTGGATGAT ATGGGAGTTCATATATCTCCTTCATCTTTAAGGGCAGATACATTAAACGATGATTTGATGAGAATTTTAAAGCCTAAAAC TTTAACCATAGCTCCAGAAGCTGGAAGTGAAAGGTTAAGAGAGTTTATAAAAAAGGACATTAGAGAGAGGGACATAGCTA ATGCCATTGATTTAGCTAAAAAATTTGGAGTTGAAAAGGTTAAGCTCTATTTTATGGTTGGCATTCCGACAGAGACTGAT GAAGATATTGAAGAACTTATAAATTTAACGAAGAAAGTAAAGAAAGAAATTAGAAAAGTAGAAATCTCAGTCAATCCAAT GATTCCAAAGCCACATACAGATTTTGAGGTAGAAGAGTTTGATTTATCATCTAAGAAAAAAATTAAGTATATTGAGAAGG CATTAAAAAAAGAAGGTATTAGGGTAGAATATGAGAACTTCAACTCCATGATTTGCCAGTGTATATTGGCAAGGGGGGAT GAAAATCTTAGCAAATATTTAGATTACTCAAAAAATCCAACAAGCTTAATTAGTGCTTTAAAGAAAGATAGATTGTTGGA TAAATACTTAGGAAGGTTTGAAGATAAAGGTGTTTGGAAAAATATTATTCTCTAA
Upstream 100 bases:
>100_bases GATATTGTTGAAAAGGCTAAAAAAGAAAATGCAAGACCTCCAGGAGTTATAGTTGTTGGTGAGGTTGTTAATGTGTTAGA TAGTCAATAAATTAATTTTT
Downstream 100 bases:
>100_bases AAATTTCAAATTTGTATATTTCCATAAGATTATGAGATTAGAAACTATCACTTTTTTAAGTTAAAACTTTAAAAAATAAG AATCATCTAAATTTTAGAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 444; Mature: 444
Protein sequence:
>444_residues MIKMIKNVAIIYPNKFKAGISCLAVHVLANHLSKYRDLNVGVYFLENYDRIKNFDAIFITLQYENDYFNAIKIIKDLRKN NPNAIFVAGGPCVMENFFPIAEFFDVFIVGEIEGSDVMLKVINREFDVEGVYSKYLEKDKVKRIYPKKLTIDDYPIYQPT SEEGAYGKSFLLEIGRGCPRRCRFCLARAIYYPPRFRKLDDLMYLAEEGVKVNKVNKVALIAPSVGDYKYIVELCNFLDD MGVHISPSSLRADTLNDDLMRILKPKTLTIAPEAGSERLREFIKKDIRERDIANAIDLAKKFGVEKVKLYFMVGIPTETD EDIEELINLTKKVKKEIRKVEISVNPMIPKPHTDFEVEEFDLSSKKKIKYIEKALKKEGIRVEYENFNSMICQCILARGD ENLSKYLDYSKNPTSLISALKKDRLLDKYLGRFEDKGVWKNIIL
Sequences:
>Translated_444_residues MIKMIKNVAIIYPNKFKAGISCLAVHVLANHLSKYRDLNVGVYFLENYDRIKNFDAIFITLQYENDYFNAIKIIKDLRKN NPNAIFVAGGPCVMENFFPIAEFFDVFIVGEIEGSDVMLKVINREFDVEGVYSKYLEKDKVKRIYPKKLTIDDYPIYQPT SEEGAYGKSFLLEIGRGCPRRCRFCLARAIYYPPRFRKLDDLMYLAEEGVKVNKVNKVALIAPSVGDYKYIVELCNFLDD MGVHISPSSLRADTLNDDLMRILKPKTLTIAPEAGSERLREFIKKDIRERDIANAIDLAKKFGVEKVKLYFMVGIPTETD EDIEELINLTKKVKKEIRKVEISVNPMIPKPHTDFEVEEFDLSSKKKIKYIEKALKKEGIRVEYENFNSMICQCILARGD ENLSKYLDYSKNPTSLISALKKDRLLDKYLGRFEDKGVWKNIIL >Mature_444_residues MIKMIKNVAIIYPNKFKAGISCLAVHVLANHLSKYRDLNVGVYFLENYDRIKNFDAIFITLQYENDYFNAIKIIKDLRKN NPNAIFVAGGPCVMENFFPIAEFFDVFIVGEIEGSDVMLKVINREFDVEGVYSKYLEKDKVKRIYPKKLTIDDYPIYQPT SEEGAYGKSFLLEIGRGCPRRCRFCLARAIYYPPRFRKLDDLMYLAEEGVKVNKVNKVALIAPSVGDYKYIVELCNFLDD MGVHISPSSLRADTLNDDLMRILKPKTLTIAPEAGSERLREFIKKDIRERDIANAIDLAKKFGVEKVKLYFMVGIPTETD EDIEELINLTKKVKKEIRKVEISVNPMIPKPHTDFEVEEFDLSSKKKIKYIEKALKKEGIRVEYENFNSMICQCILARGD ENLSKYLDYSKNPTSLISALKKDRLLDKYLGRFEDKGVWKNIIL
Specific function: Unknown
COG id: COG1032
COG function: function code C; Fe-S oxidoreductase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y966_METJA (Q58376)
Other databases:
- EMBL: L77117 - PIR: F64420 - RefSeq: NP_247961.1 - ProteinModelPortal: Q58376 - GeneID: 1451864 - GenomeReviews: L77117_GR - KEGG: mja:MJ_0966 - NMPDR: fig|243232.1.peg.998 - TIGR: MJ0966 - HOGENOM: HBG539158 - OMA: AGISCLA - ProtClustDB: CLSK2749942 - BioCyc: MJAN243232:MJ_0966-MONOMER - InterPro: IPR006638 - InterPro: IPR005839 - InterPro: IPR007197 - PANTHER: PTHR11918 - SMART: SM00729
Pfam domain/function: PF04055 Radical_SAM
EC number: NA
Molecular weight: Translated: 51349; Mature: 51349
Theoretical pI: Translated: 8.74; Mature: 8.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKMIKNVAIIYPNKFKAGISCLAVHVLANHLSKYRDLNVGVYFLENYDRIKNFDAIFIT CCEEECCEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHCCCCEEEEE LQYENDYFNAIKIIKDLRKNNPNAIFVAGGPCVMENFFPIAEFFDVFIVGEIEGSDVMLK EEECCCHHHHHHHHHHHHCCCCCEEEEECCHHHHHHCCCHHHHCCEEEEEEECCCHHHHH VINREFDVEGVYSKYLEKDKVKRIYPKKLTIDDYPIYQPTSEEGAYGKSFLLEIGRGCPR HHCCCCCCCHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCCCCCHHHHHHHHHCCCHH RCRFCLARAIYYPPRFRKLDDLMYLAEEGVKVNKVNKVALIAPSVGDYKYIVELCNFLDD HHHHHHHHHHHCCCCHHHHHHHHHHHHCCCEEECCCEEEEECCCCCCHHHHHHHHHHHHH MGVHISPSSLRADTLNDDLMRILKPKTLTIAPEAGSERLREFIKKDIRERDIANAIDLAK CCCEECCCCCCCCCCCHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHH KFGVEKVKLYFMVGIPTETDEDIEELINLTKKVKKEIRKVEISVNPMIPKPHTDFEVEEF HCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCCHHC DLSSKKKIKYIEKALKKEGIRVEYENFNSMICQCILARGDENLSKYLDYSKNPTSLISAL CCCCHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHCCCHHHHHHHCCCCCHHHHHHHH KKDRLLDKYLGRFEDKGVWKNIIL HHHHHHHHHHHHCCCCCCHHHCCC >Mature Secondary Structure MIKMIKNVAIIYPNKFKAGISCLAVHVLANHLSKYRDLNVGVYFLENYDRIKNFDAIFIT CCEEECCEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHCCCCEEEEE LQYENDYFNAIKIIKDLRKNNPNAIFVAGGPCVMENFFPIAEFFDVFIVGEIEGSDVMLK EEECCCHHHHHHHHHHHHCCCCCEEEEECCHHHHHHCCCHHHHCCEEEEEEECCCHHHHH VINREFDVEGVYSKYLEKDKVKRIYPKKLTIDDYPIYQPTSEEGAYGKSFLLEIGRGCPR HHCCCCCCCHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCCCCCHHHHHHHHHCCCHH RCRFCLARAIYYPPRFRKLDDLMYLAEEGVKVNKVNKVALIAPSVGDYKYIVELCNFLDD HHHHHHHHHHHCCCCHHHHHHHHHHHHCCCEEECCCEEEEECCCCCCHHHHHHHHHHHHH MGVHISPSSLRADTLNDDLMRILKPKTLTIAPEAGSERLREFIKKDIRERDIANAIDLAK CCCEECCCCCCCCCCCHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHH KFGVEKVKLYFMVGIPTETDEDIEELINLTKKVKKEIRKVEISVNPMIPKPHTDFEVEEF HCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCCHHC DLSSKKKIKYIEKALKKEGIRVEYENFNSMICQCILARGDENLSKYLDYSKNPTSLISAL CCCCHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHCCCHHHHHHHCCCCCHHHHHHHH KKDRLLDKYLGRFEDKGVWKNIIL HHHHHHHHHHHHCCCCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087