| Definition | Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome. |
|---|---|
| Accession | NC_000909 |
| Length | 1,664,970 |
Click here to switch to the map view.
The map label for this gene is 15669139
Identifier: 15669139
GI number: 15669139
Start: 881265
End: 881636
Strand: Reverse
Name: 15669139
Synonym: MJ0949
Alternate gene names: NA
Gene position: 881636-881265 (Counterclockwise)
Preceding gene: 15669140
Following gene: 15669138
Centisome position: 52.95
GC content: 32.53
Gene sequence:
>372_bases ATGACGATATTGCTAATCAGAGGAGATAGTTATGAAAAATTAAAGAATGCCTTAGCTGATGTTGATAGGCATGCAGAGCT AACAATTATTGGAAAGCCAAAAATTATTGTTCCAGAAGCTGCAGATGAAATATTAAGTCATATATTGGGGGAAGTTAAAA AACCATGTAAAACTGCATGCTTAGCAAAGATTGCTGAAAAAGCACCAAAAGCAATAGATAGAATTAGAAAAATTCATCCA CCTGCTCATATTGTTGTGATTAGTGAGAGATATGGTGACATATATTATAAGTTATTGGACGACTTCCCAAAACTTCCAGT GTTAAAGGGCTATTACAAATCTAAGAAAAAAGATAAGAAGAAAAAGAAGTAA
Upstream 100 bases:
>100_bases TTTATGCTTGAGGAATATTTGAAACATAATGATAGACATTTGAGGATAAAATACTAAGAAAATTTAAAATTAATATTAAA AAACACGTTTAGGGATAGTT
Downstream 100 bases:
>100_bases ATTGGTTAATTTTCATTAGTATTAGGTGATTTTTATGAAAAATAGCACAGAATATCCAACATTAGTGGAAATAAAAGACA AAAAAGGAGAAATGATTGAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 123; Mature: 122
Protein sequence:
>123_residues MTILLIRGDSYEKLKNALADVDRHAELTIIGKPKIIVPEAADEILSHILGEVKKPCKTACLAKIAEKAPKAIDRIRKIHP PAHIVVISERYGDIYYKLLDDFPKLPVLKGYYKSKKKDKKKKK
Sequences:
>Translated_123_residues MTILLIRGDSYEKLKNALADVDRHAELTIIGKPKIIVPEAADEILSHILGEVKKPCKTACLAKIAEKAPKAIDRIRKIHP PAHIVVISERYGDIYYKLLDDFPKLPVLKGYYKSKKKDKKKKK >Mature_122_residues TILLIRGDSYEKLKNALADVDRHAELTIIGKPKIIVPEAADEILSHILGEVKKPCKTACLAKIAEKAPKAIDRIRKIHPP AHIVVISERYGDIYYKLLDDFPKLPVLKGYYKSKKKDKKKKK
Specific function: Unknown
COG id: COG1844
COG function: function code S; Uncharacterized protein conserved in archaea
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y949_METJA (Q58359)
Other databases:
- EMBL: L77117 - PIR: E64418 - RefSeq: NP_247944.1 - GeneID: 1451846 - GenomeReviews: L77117_GR - KEGG: mja:MJ_0949 - NMPDR: fig|243232.1.peg.981 - TIGR: MJ0949 - HOGENOM: HBG551680 - OMA: DIHPPAH - ProtClustDB: CLSK865260 - BioCyc: MJAN243232:MJ_0949-MONOMER - InterPro: IPR016192 - InterPro: IPR007154 - PIRSF: PIRSF006606
Pfam domain/function: PF04009 DUF356
EC number: NA
Molecular weight: Translated: 13959; Mature: 13828
Theoretical pI: Translated: 10.29; Mature: 10.29
Prosite motif: PS00903 CYT_DCMP_DEAMINASES
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTILLIRGDSYEKLKNALADVDRHAELTIIGKPKIIVPEAADEILSHILGEVKKPCKTAC CEEEEEECCCHHHHHHHHHHHCCCCEEEEECCCCEECCHHHHHHHHHHHHHHHHHHHHHH LAKIAEKAPKAIDRIRKIHPPAHIVVISERYGDIYYKLLDDFPKLPVLKGYYKSKKKDKK HHHHHHHHHHHHHHHHHHCCCEEEEEEECCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH KKK CCC >Mature Secondary Structure TILLIRGDSYEKLKNALADVDRHAELTIIGKPKIIVPEAADEILSHILGEVKKPCKTAC EEEEEECCCHHHHHHHHHHHCCCCEEEEECCCCEECCHHHHHHHHHHHHHHHHHHHHHH LAKIAEKAPKAIDRIRKIHPPAHIVVISERYGDIYYKLLDDFPKLPVLKGYYKSKKKDKK HHHHHHHHHHHHHHHHHHCCCEEEEEEECCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH KKK CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087