| Definition | Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome. |
|---|---|
| Accession | NC_000909 |
| Length | 1,664,970 |
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The map label for this gene is 15669063
Identifier: 15669063
GI number: 15669063
Start: 796018
End: 797235
Strand: Reverse
Name: 15669063
Synonym: MJ0872
Alternate gene names: NA
Gene position: 797235-796018 (Counterclockwise)
Preceding gene: 15669067
Following gene: 15669061
Centisome position: 47.88
GC content: 33.17
Gene sequence:
>1218_bases ATGTTATTAATTTTTTTTAAAAAATATGAACAGAGTGATATTATGAGAAAATTATTCTTACTATCAATTTTAATGATTGG GGTTATAGTTGCATTTGCAGGATGTGTGGAAGAGAGTAAAACTACAACTCAGCTTCAACAAACTACCCAATCTGAATCAC AAAAAGCTGAAACTCAGCCAAAATTAGGAGTTAATGTGGTTAGATACGCAGAAACGTTCAAACTCTATCCTCACTGGGAT GAGGGTTATTGTGTAGTTGCTGATTCTGTGGGTAACAAGTTTGTTTTGGTTGAAGGAAATGCTAAGGCTCCTAACATTTC AGATGGGAAGATAATAAAAGTTCCTGTAAAAAGAATCGTTACAGACTTTTATTGCCCAATTATATCAGCAGCAGACATAT TGAATGCCTATCATCATACTATAGTTGGGGCTCCAAAGTATGCTGTAGAAAAGTCGCCAAAACTTAAAGAATTGTTTGAT GAAGGAAAAGTGGTAGATATAGGAAGTCCAAGTAAAGGAGTAAATTATGAGTTAATAGTAAATTTGACTCCAGATATTGT TTTTTTAGGTGACTGGAAGAGTGAAGATGTGGTTGAAGAGAAACTAAAAGAATTGGGAGTAACTGTTTCAAGATTCTACA CCTATCAAGAACCAACATACATGGGAAGAGTAGAGTGGATAAAATTTGCCGCGGCATTCTGGGGATCCAACGCATATAAA AAAGCAGATAAATGGTTTGAAAATGTAGTTAAAGTAAGAGAAAATATATTGAAAAAGGTTCAAAATGTAACAAATGAACC AACGGTTGTTATCTTCAGCTGGTCAAAAACCAAAAATATGCCAGGAATCTATGGAAATGATAGTTATTACAGCAAAATGA TTGCTGAGTTTAAAGGTAAAAATGTATTTGATGATTATAATAGAGGCTATCAATATGTAGATAAAGAAACGTTTTATGAA AGGGCTATGAACGCAGATGTTGTTATATTAATATGGTTCTATGGAGATGTTAAGACAAAAGAAGATTTATTAAAAATAAA TCCAAACTTTGCTGAATTTAAAGCATTTAAAACTGGAAGGTTCTATGTGTCTCATCCAGATTATTATGTTTGGGAGGCAA GAGACCCAGCTGGTTATATGATGGACTTTGCAAAGATGATTCACCCAGAGTTGTTTGGAGGAGACGATGATTTAAAATAC TATTACAAAATCAAATAA
Upstream 100 bases:
>100_bases AGGTTTTTTATAATTTATGATATGAAATACTTAATAACTCCTAACAATTAATAACAATAATAATAGTAAAATTTATATTA GATAATCTTTATAGTCCTAA
Downstream 100 bases:
>100_bases AATTAATTAAATCTTTTGGTTTATTTTTATTTAAAATACATTAAATTAATAAAAGCCCCGCTATTATAAAGATATCCAAC AACAAAGTGATTGCTGCATT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 405; Mature: 405
Protein sequence:
>405_residues MLLIFFKKYEQSDIMRKLFLLSILMIGVIVAFAGCVEESKTTTQLQQTTQSESQKAETQPKLGVNVVRYAETFKLYPHWD EGYCVVADSVGNKFVLVEGNAKAPNISDGKIIKVPVKRIVTDFYCPIISAADILNAYHHTIVGAPKYAVEKSPKLKELFD EGKVVDIGSPSKGVNYELIVNLTPDIVFLGDWKSEDVVEEKLKELGVTVSRFYTYQEPTYMGRVEWIKFAAAFWGSNAYK KADKWFENVVKVRENILKKVQNVTNEPTVVIFSWSKTKNMPGIYGNDSYYSKMIAEFKGKNVFDDYNRGYQYVDKETFYE RAMNADVVILIWFYGDVKTKEDLLKINPNFAEFKAFKTGRFYVSHPDYYVWEARDPAGYMMDFAKMIHPELFGGDDDLKY YYKIK
Sequences:
>Translated_405_residues MLLIFFKKYEQSDIMRKLFLLSILMIGVIVAFAGCVEESKTTTQLQQTTQSESQKAETQPKLGVNVVRYAETFKLYPHWD EGYCVVADSVGNKFVLVEGNAKAPNISDGKIIKVPVKRIVTDFYCPIISAADILNAYHHTIVGAPKYAVEKSPKLKELFD EGKVVDIGSPSKGVNYELIVNLTPDIVFLGDWKSEDVVEEKLKELGVTVSRFYTYQEPTYMGRVEWIKFAAAFWGSNAYK KADKWFENVVKVRENILKKVQNVTNEPTVVIFSWSKTKNMPGIYGNDSYYSKMIAEFKGKNVFDDYNRGYQYVDKETFYE RAMNADVVILIWFYGDVKTKEDLLKINPNFAEFKAFKTGRFYVSHPDYYVWEARDPAGYMMDFAKMIHPELFGGDDDLKY YYKIK >Mature_405_residues MLLIFFKKYEQSDIMRKLFLLSILMIGVIVAFAGCVEESKTTTQLQQTTQSESQKAETQPKLGVNVVRYAETFKLYPHWD EGYCVVADSVGNKFVLVEGNAKAPNISDGKIIKVPVKRIVTDFYCPIISAADILNAYHHTIVGAPKYAVEKSPKLKELFD EGKVVDIGSPSKGVNYELIVNLTPDIVFLGDWKSEDVVEEKLKELGVTVSRFYTYQEPTYMGRVEWIKFAAAFWGSNAYK KADKWFENVVKVRENILKKVQNVTNEPTVVIFSWSKTKNMPGIYGNDSYYSKMIAEFKGKNVFDDYNRGYQYVDKETFYE RAMNADVVILIWFYGDVKTKEDLLKINPNFAEFKAFKTGRFYVSHPDYYVWEARDPAGYMMDFAKMIHPELFGGDDDLKY YYKIK
Specific function: Unknown
COG id: COG0614
COG function: function code P; ABC-type Fe3+-hydroxamate transport system, periplasmic component
Gene ontology:
Cell location: Cell membrane; Lipid-anchor (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 Fe/B12 periplasmic-binding domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002491 [H]
Pfam domain/function: PF01497 Peripla_BP_2 [H]
EC number: NA
Molecular weight: Translated: 46667; Mature: 46667
Theoretical pI: Translated: 7.52; Mature: 7.52
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50983 FE_B12_PBP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLIFFKKYEQSDIMRKLFLLSILMIGVIVAFAGCVEESKTTTQLQQTTQSESQKAETQP CEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCC KLGVNVVRYAETFKLYPHWDEGYCVVADSVGNKFVLVEGNAKAPNISDGKIIKVPVKRIV CCCCHHEEEEHHEEECCCCCCCEEEEEECCCCEEEEEECCCCCCCCCCCCEEEECHHHHH TDFYCPIISAADILNAYHHTIVGAPKYAVEKSPKLKELFDEGKVVDIGSPSKGVNYELIV HHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCHHHHHCCCCEEECCCCCCCCCEEEEE NLTPDIVFLGDWKSEDVVEEKLKELGVTVSRFYTYQEPTYMGRVEWIKFAAAFWGSNAYK ECCCCEEEEECCCCCHHHHHHHHHHCCCHHHEEEECCCCCCCHHHHHHHHHHHHCCCHHH KADKWFENVVKVRENILKKVQNVTNEPTVVIFSWSKTKNMPGIYGNDSYYSKMIAEFKGK HHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHCCC NVFDDYNRGYQYVDKETFYERAMNADVVILIWFYGDVKTKEDLLKINPNFAEFKAFKTGR CCCCHHHCCCHHCCHHHHHHHHCCCCEEEEEEEECCCCCCCCCEEECCCHHHHEEEECCE FYVSHPDYYVWEARDPAGYMMDFAKMIHPELFGGDDDLKYYYKIK EEEECCCEEEEECCCCHHHHHHHHHHHCHHHCCCCCCCEEEEEEC >Mature Secondary Structure MLLIFFKKYEQSDIMRKLFLLSILMIGVIVAFAGCVEESKTTTQLQQTTQSESQKAETQP CEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCC KLGVNVVRYAETFKLYPHWDEGYCVVADSVGNKFVLVEGNAKAPNISDGKIIKVPVKRIV CCCCHHEEEEHHEEECCCCCCCEEEEEECCCCEEEEEECCCCCCCCCCCCEEEECHHHHH TDFYCPIISAADILNAYHHTIVGAPKYAVEKSPKLKELFDEGKVVDIGSPSKGVNYELIV HHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCHHHHHCCCCEEECCCCCCCCCEEEEE NLTPDIVFLGDWKSEDVVEEKLKELGVTVSRFYTYQEPTYMGRVEWIKFAAAFWGSNAYK ECCCCEEEEECCCCCHHHHHHHHHHCCCHHHEEEECCCCCCCHHHHHHHHHHHHCCCHHH KADKWFENVVKVRENILKKVQNVTNEPTVVIFSWSKTKNMPGIYGNDSYYSKMIAEFKGK HHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHCCC NVFDDYNRGYQYVDKETFYERAMNADVVILIWFYGDVKTKEDLLKINPNFAEFKAFKTGR CCCCHHHCCCHHCCHHHHHHHHCCCCEEEEEEEECCCCCCCCCEEECCCHHHHEEEECCE FYVSHPDYYVWEARDPAGYMMDFAKMIHPELFGGDDDLKYYYKIK EEEECCCEEEEECCCCHHHHHHHHHHHCHHHCCCCCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]