Definition Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome.
Accession NC_000909
Length 1,664,970

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The map label for this gene is 15669062

Identifier: 15669062

GI number: 15669062

Start: 795024

End: 795977

Strand: Direct

Name: 15669062

Synonym: MJ0871

Alternate gene names: NA

Gene position: 795024-795977 (Clockwise)

Preceding gene: 15669060

Following gene: 15669064

Centisome position: 47.75

GC content: 31.24

Gene sequence:

>954_bases
GTGATAGTTGTGGATTACATAACTCCATTAATGGAGAGTATGAAAATCTCTGCTTATTATACCATAAGAATATCTATTAT
TGTTTTAACAACGGTGTTTATTGTTAATTACATTATGAGTACTGGCATCATGAAGAAGCTAAGTAATATGTTATCTCCAA
TTTTAAGAAGGCTTAAAGTTAATCCTCTTTCAATATCCTCTACTTTAGCATGCTTTTTCAGCCCAACAGTAGGATACTCA
ATTTTAGCAGAGGGATTGAAGGAGAATAAAGTAAATGAAAGAGAGGTTATAGGAGCTTCTTTAGCAAATTCATTCCCTTC
AGTTTTGTCCCATACATTCACATTTTTTATTCCAGTTGTTGTTCCAATTTTAGGACATACAGGAGTTTTATATGTCTTGA
TAAGGTTGGGGGTAGCTTTAGCAAAGACAATAATTGGATTTTTATATTTATCAATTATATCAGAGGATTATTCCTTTGAG
ATGCCAGAGATAAATAAATTAAACAAAAAGGAGAATGCAAAGAAATCATTTAAAAGCACTATTAGATTTGCCAAGAGATT
AATACCAATAATGTTTTTTATGATGACATTGGTTCTCTATTTGTCTAAAATTGGATTTTTTGATTATGTTGAGAAATTTG
TTCAACCAATAACAAACTTGCTAAATTTAAATCCCAACGTTGGCATTTTGGCATTGACAGAGATTATGAATGTGCAGGCA
GCTATAGTTATGGCTGGTGGATTTTTAAATGAGGGAATTTTGAGCTCAAAAGAGGTTTTAATTGGTTTGATTATTGGGAA
TGTTTTGACATTCTCAACAAGATATGTTAAGCATTCCTTACCTTTGCATGTTTCTCTATTTGGAGCTAAGTTAGGGACTA
AAATAGTTATGGTTAATGCAGCAATCACTTTGTTGTTGGATATCTTTATAATAGCGGGGCTTTTATTAATTTAA

Upstream 100 bases:

>100_bases
GTGTTCATGAATTACACACATATAAATTTCCCCCAAATGTGTATTTATATTTTTTGATATTTTTTGAATTGAGAATTGAA
TGTTATTTTAATAATATTAG

Downstream 100 bases:

>100_bases
TGTATTTTAAATAAAAATAAACCAAAAGATTTAATTAATTTTATTTGATTTTGTAATAGTATTTTAAATCATCGTCTCCT
CCAAACAACTCTGGGTGAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 317; Mature: 317

Protein sequence:

>317_residues
MIVVDYITPLMESMKISAYYTIRISIIVLTTVFIVNYIMSTGIMKKLSNMLSPILRRLKVNPLSISSTLACFFSPTVGYS
ILAEGLKENKVNEREVIGASLANSFPSVLSHTFTFFIPVVVPILGHTGVLYVLIRLGVALAKTIIGFLYLSIISEDYSFE
MPEINKLNKKENAKKSFKSTIRFAKRLIPIMFFMMTLVLYLSKIGFFDYVEKFVQPITNLLNLNPNVGILALTEIMNVQA
AIVMAGGFLNEGILSSKEVLIGLIIGNVLTFSTRYVKHSLPLHVSLFGAKLGTKIVMVNAAITLLLDIFIIAGLLLI

Sequences:

>Translated_317_residues
MIVVDYITPLMESMKISAYYTIRISIIVLTTVFIVNYIMSTGIMKKLSNMLSPILRRLKVNPLSISSTLACFFSPTVGYS
ILAEGLKENKVNEREVIGASLANSFPSVLSHTFTFFIPVVVPILGHTGVLYVLIRLGVALAKTIIGFLYLSIISEDYSFE
MPEINKLNKKENAKKSFKSTIRFAKRLIPIMFFMMTLVLYLSKIGFFDYVEKFVQPITNLLNLNPNVGILALTEIMNVQA
AIVMAGGFLNEGILSSKEVLIGLIIGNVLTFSTRYVKHSLPLHVSLFGAKLGTKIVMVNAAITLLLDIFIIAGLLLI
>Mature_317_residues
MIVVDYITPLMESMKISAYYTIRISIIVLTTVFIVNYIMSTGIMKKLSNMLSPILRRLKVNPLSISSTLACFFSPTVGYS
ILAEGLKENKVNEREVIGASLANSFPSVLSHTFTFFIPVVVPILGHTGVLYVLIRLGVALAKTIIGFLYLSIISEDYSFE
MPEINKLNKKENAKKSFKSTIRFAKRLIPIMFFMMTLVLYLSKIGFFDYVEKFVQPITNLLNLNPNVGILALTEIMNVQA
AIVMAGGFLNEGILSSKEVLIGLIIGNVLTFSTRYVKHSLPLHVSLFGAKLGTKIVMVNAAITLLLDIFIIAGLLLI

Specific function: Unknown

COG id: COG3366

COG function: function code S; Uncharacterized protein conserved in archaea

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To M.jannaschii MJ0880, MJ1556 and MJ1589

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y871_METJA (Q58281)

Other databases:

- EMBL:   L77117
- PIR:   G64408
- RefSeq:   NP_247866.1
- ProteinModelPortal:   Q58281
- GeneID:   1451760
- GenomeReviews:   L77117_GR
- KEGG:   mja:MJ_0871
- NMPDR:   fig|243232.1.peg.903
- TIGR:   MJ0871
- HOGENOM:   HBG539135
- OMA:   ANSFPSV
- ProtClustDB:   CLSK862773
- BioCyc:   MJAN243232:MJ_0871-MONOMER
- InterPro:   IPR011642

Pfam domain/function: PF07670 Gate

EC number: NA

Molecular weight: Translated: 35129; Mature: 35129

Theoretical pI: Translated: 10.12; Mature: 10.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xd9cab2c)-; HASH(0xda2996c)-; HASH(0xd6631a8)-; HASH(0xd9a69d4)-; HASH(0xdb29a50)-; HASH(0xd4ca5f8)-; HASH(0xd2279c4)-;

Cys/Met content:

0.3 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIVVDYITPLMESMKISAYYTIRISIIVLTTVFIVNYIMSTGIMKKLSNMLSPILRRLKV
CEEHHHHHHHHHHHHHHEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
NPLSISSTLACFFSPTVGYSILAEGLKENKVNEREVIGASLANSFPSVLSHTFTFFIPVV
CCCCHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VPILGHTGVLYVLIRLGVALAKTIIGFLYLSIISEDYSFEMPEINKLNKKENAKKSFKST
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHCCCHHHHHHHHHHH
IRFAKRLIPIMFFMMTLVLYLSKIGFFDYVEKFVQPITNLLNLNPNVGILALTEIMNVQA
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH
AIVMAGGFLNEGILSSKEVLIGLIIGNVLTFSTRYVKHSLPLHVSLFGAKLGTKIVMVNA
HHHHHCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHCCHHHHHHH
AITLLLDIFIIAGLLLI
HHHHHHHHHHHHHHHHH
>Mature Secondary Structure
MIVVDYITPLMESMKISAYYTIRISIIVLTTVFIVNYIMSTGIMKKLSNMLSPILRRLKV
CEEHHHHHHHHHHHHHHEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
NPLSISSTLACFFSPTVGYSILAEGLKENKVNEREVIGASLANSFPSVLSHTFTFFIPVV
CCCCHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VPILGHTGVLYVLIRLGVALAKTIIGFLYLSIISEDYSFEMPEINKLNKKENAKKSFKST
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHCCCHHHHHHHHHHH
IRFAKRLIPIMFFMMTLVLYLSKIGFFDYVEKFVQPITNLLNLNPNVGILALTEIMNVQA
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH
AIVMAGGFLNEGILSSKEVLIGLIIGNVLTFSTRYVKHSLPLHVSLFGAKLGTKIVMVNA
HHHHHCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHCCHHHHHHH
AITLLLDIFIIAGLLLI
HHHHHHHHHHHHHHHHH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8688087