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The map label for this gene is fni

Identifier: 15669053

GI number: 15669053

Start: 785303

End: 786382

Strand: Reverse

Name: fni

Synonym: MJ0862

Alternate gene names: 15669053

Gene position: 786382-785303 (Counterclockwise)

Preceding gene: 15669054

Following gene: 15669052

Centisome position: 47.23

GC content: 31.76

Gene sequence:

>1080_bases
ATGGTTAATAATAGAAATGAGATAGAAGTTAGAAAATTAGAACATATATTTCTATGTAGTTATTGTAATGTTGAATATGA
AAAAACAACATTATTAGAAGATATTGAACTAATACACAAAGGAACCTGCGGAATTAATTTTAATGATATAGAAACAGAAA
TAGAATTGTTTGGAAAAAAACTATCTGCTCCAATTATTGTTTCTGGTATGACTGGGGGGCATAGTAAGGCAAAGGAGATA
AACAAGAATATAGCCAAGGCAGTTGAAGAACTCGGCTTAGGTATGGGTGTTGGCTCTCAGAGGGCAGCTATTGTTAATGA
TGAGCTGATAGATACCTATAGCATTGTTAGAGACTACACAAACAATTTAGTTATAGGTAACTTAGGAGCAGTTAATTTCA
TTGTTGATGATTGGGATGAGGAGATTATAGATAAGGCAATTGAAATGATAGATGCCGATGCTATAGCTATACATTTCAAT
CCATTACAAGAGATTATACAGCCAGAAGGTGATTTAAACTTTAAAAACCTATATAAACTCAAAGAAATTATTTCAAATTA
CAAAAAAAGCTATAAAAATATTCCATTTATTGCTAAACAAGTAGGAGAAGGTTTTTCAAAGGAAGATGCATTAATTTTAA
AAGATATTGGCTTTGATGCAATAGATGTTCAAGGAAGTGGAGGCACTTCATGGGCAAAGGTTGAGATTTATAGAGTTAAG
GAGGAGGAAATTAAAAGATTGGCTGAAAAATTTGCTAATTGGGGCATTCCAACTGCCGCTTCAATATTTGAAGTAAAAAG
CGTTTATGATGGTATAGTTATTGGTTCTGGAGGCATAAGAGGAGGTTTAGATATAGCTAAATGTATAGCAATTGGTTGTG
ATTGCTGTTCAGTTGCTTTGCCTATATTAAAAGCAAGTTTAAAGGGCTGGGAAGAGGTTGTTAAAGTTTTAGAGAGCTAT
ATAAAAGAGTTAAAAATAGCGATGTTTTTAGTTGGAGCTGAAAATATTGAAGAACTTAAAAAAACATCTTATATAGTTAA
AGGAACTTTAAAAGAATGGATTTCCCAGAGATTAAAATAA

Upstream 100 bases:

>100_bases
AAAGTCAATACTAACTTTTTTATAATGTGTCTATTTTTAATTTGTTATTAAAATTTCACAAAGTTATATAGCAAATATTT
ATATAGTATTTGGTGAAATT

Downstream 100 bases:

>100_bases
AACAGTATTGTTAATACTGTTATCCCATTTATGATTTTTATTTTTATCTTAGATGTTAGGCTGTAAATTTATTTAAAATA
ATTAAATATTTATAAACATT

Product: isopentenyl pyrophosphate isomerase

Products: NA

Alternate protein names: IPP isomerase; Isopentenyl pyrophosphate isomerase

Number of amino acids: Translated: 359; Mature: 359

Protein sequence:

>359_residues
MVNNRNEIEVRKLEHIFLCSYCNVEYEKTTLLEDIELIHKGTCGINFNDIETEIELFGKKLSAPIIVSGMTGGHSKAKEI
NKNIAKAVEELGLGMGVGSQRAAIVNDELIDTYSIVRDYTNNLVIGNLGAVNFIVDDWDEEIIDKAIEMIDADAIAIHFN
PLQEIIQPEGDLNFKNLYKLKEIISNYKKSYKNIPFIAKQVGEGFSKEDALILKDIGFDAIDVQGSGGTSWAKVEIYRVK
EEEIKRLAEKFANWGIPTAASIFEVKSVYDGIVIGSGGIRGGLDIAKCIAIGCDCCSVALPILKASLKGWEEVVKVLESY
IKELKIAMFLVGAENIEELKKTSYIVKGTLKEWISQRLK

Sequences:

>Translated_359_residues
MVNNRNEIEVRKLEHIFLCSYCNVEYEKTTLLEDIELIHKGTCGINFNDIETEIELFGKKLSAPIIVSGMTGGHSKAKEI
NKNIAKAVEELGLGMGVGSQRAAIVNDELIDTYSIVRDYTNNLVIGNLGAVNFIVDDWDEEIIDKAIEMIDADAIAIHFN
PLQEIIQPEGDLNFKNLYKLKEIISNYKKSYKNIPFIAKQVGEGFSKEDALILKDIGFDAIDVQGSGGTSWAKVEIYRVK
EEEIKRLAEKFANWGIPTAASIFEVKSVYDGIVIGSGGIRGGLDIAKCIAIGCDCCSVALPILKASLKGWEEVVKVLESY
IKELKIAMFLVGAENIEELKKTSYIVKGTLKEWISQRLK
>Mature_359_residues
MVNNRNEIEVRKLEHIFLCSYCNVEYEKTTLLEDIELIHKGTCGINFNDIETEIELFGKKLSAPIIVSGMTGGHSKAKEI
NKNIAKAVEELGLGMGVGSQRAAIVNDELIDTYSIVRDYTNNLVIGNLGAVNFIVDDWDEEIIDKAIEMIDADAIAIHFN
PLQEIIQPEGDLNFKNLYKLKEIISNYKKSYKNIPFIAKQVGEGFSKEDALILKDIGFDAIDVQGSGGTSWAKVEIYRVK
EEEIKRLAEKFANWGIPTAASIFEVKSVYDGIVIGSGGIRGGLDIAKCIAIGCDCCSVALPILKASLKGWEEVVKVLESY
IKELKIAMFLVGAENIEELKKTSYIVKGTLKEWISQRLK

Specific function: Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP)

COG id: COG1304

COG function: function code C; L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the IPP isomerase type 2 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): IDI2_METJA (Q58272)

Other databases:

- EMBL:   L77117
- PIR:   F64407
- RefSeq:   NP_247857.1
- ProteinModelPortal:   Q58272
- SMR:   Q58272
- GeneID:   1451751
- GenomeReviews:   L77117_GR
- KEGG:   mja:MJ_0862
- NMPDR:   fig|243232.1.peg.894
- TIGR:   MJ0862
- HOGENOM:   HBG354479
- OMA:   GSQRAAI
- ProtClustDB:   PRK05437
- BioCyc:   MJAN243232:MJ_0862-MONOMER
- BRENDA:   5.3.3.2
- GO:   GO:0005737
- HAMAP:   MF_00354
- InterPro:   IPR013785
- InterPro:   IPR000262
- InterPro:   IPR011179
- Gene3D:   G3DSA:3.20.20.70
- PANTHER:   PTHR10578:SF3
- PIRSF:   PIRSF003314
- TIGRFAMs:   TIGR02151

Pfam domain/function: PF01070 FMN_dh

EC number: =5.3.3.2

Molecular weight: Translated: 39876; Mature: 39876

Theoretical pI: Translated: 4.81; Mature: 4.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVNNRNEIEVRKLEHIFLCSYCNVEYEKTTLLEDIELIHKGTCGINFNDIETEIELFGKK
CCCCCCCHHHHHHHHHEEEHHCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH
LSAPIIVSGMTGGHSKAKEINKNIAKAVEELGLGMGVGSQRAAIVNDELIDTYSIVRDYT
CCCCEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCEECCHHHHHHHHHHHHHH
NNLVIGNLGAVNFIVDDWDEEIIDKAIEMIDADAIAIHFNPLQEIIQPEGDLNFKNLYKL
CCEEEECCCEEEEEECCHHHHHHHHHHHHHCCCEEEEEECHHHHHHCCCCCCCHHHHHHH
KEIISNYKKSYKNIPFIAKQVGEGFSKEDALILKDIGFDAIDVQGSGGTSWAKVEIYRVK
HHHHHHHHHHHCCCCHHHHHHCCCCCCCCCEEEEECCCCEEEEECCCCCCEEEEEEEECC
EEEIKRLAEKFANWGIPTAASIFEVKSVYDGIVIGSGGIRGGLDIAKCIAIGCDCCSVAL
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCEEECCCCCCCCHHHHHHHHHCCCHHHHHH
PILKASLKGWEEVVKVLESYIKELKIAMFLVGAENIEELKKTSYIVKGTLKEWISQRLK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MVNNRNEIEVRKLEHIFLCSYCNVEYEKTTLLEDIELIHKGTCGINFNDIETEIELFGKK
CCCCCCCHHHHHHHHHEEEHHCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH
LSAPIIVSGMTGGHSKAKEINKNIAKAVEELGLGMGVGSQRAAIVNDELIDTYSIVRDYT
CCCCEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCEECCHHHHHHHHHHHHHH
NNLVIGNLGAVNFIVDDWDEEIIDKAIEMIDADAIAIHFNPLQEIIQPEGDLNFKNLYKL
CCEEEECCCEEEEEECCHHHHHHHHHHHHHCCCEEEEEECHHHHHHCCCCCCCHHHHHHH
KEIISNYKKSYKNIPFIAKQVGEGFSKEDALILKDIGFDAIDVQGSGGTSWAKVEIYRVK
HHHHHHHHHHHCCCCHHHHHHCCCCCCCCCEEEEECCCCEEEEECCCCCCEEEEEEEECC
EEEIKRLAEKFANWGIPTAASIFEVKSVYDGIVIGSGGIRGGLDIAKCIAIGCDCCSVAL
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCEEECCCCCCCCHHHHHHHHHCCCHHHHHH
PILKASLKGWEEVVKVLESYIKELKIAMFLVGAENIEELKKTSYIVKGTLKEWISQRLK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087