Definition Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome.
Accession NC_000909
Length 1,664,970

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The map label for this gene is 15669047

Identifier: 15669047

GI number: 15669047

Start: 780616

End: 780945

Strand: Reverse

Name: 15669047

Synonym: MJ0856.1

Alternate gene names: NA

Gene position: 780945-780616 (Counterclockwise)

Preceding gene: 15669048

Following gene: 15669046

Centisome position: 46.9

GC content: 38.48

Gene sequence:

>330_bases
TTGCATAACATCTCAGCTAAAAAATTCTTAGGTTATTTAAAAAATAAATGCTTAGAATTTGGCGTTAAAGTTATTGAAGG
AAATCCGGCTTACACTTCGATAAAATGTCCTAATTGTGGGAGTAGATTATCTCAACTGTATAAATTAGCCGATGAGAGGG
CTCTGCCTTCGAGGCTAATGTATTGCTTTGATTGCGGATTTTATGCTGATAGGGATACTGTAGCTGTATTTAATTTGATA
AAGAGATTTACGGGGCTGTATCCGTTCAGCCCTAAGTCCAATGAACCCATAGCAGAGGGAACGGTGTTTCCCGATGAAGC
TATGGGTTGA

Upstream 100 bases:

>100_bases
AAAACTTAAAGAAAATAATGCAGTTTTAGTTATTGAAGACTTATCCCCTTATTTTAACCAAAATATTGCTAAAAAATCAT
TTAAAAAACTAAAACATAAA

Downstream 100 bases:

>100_bases
GGACAACCCGTTTCCATAGCTTACCGATTAGATACGATAAGTTATTATATGATAAGTTATTAAATGCTATGGTAAGCTAT
GGAAATGGGGAACGGAATGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 109; Mature: 109

Protein sequence:

>109_residues
MHNISAKKFLGYLKNKCLEFGVKVIEGNPAYTSIKCPNCGSRLSQLYKLADERALPSRLMYCFDCGFYADRDTVAVFNLI
KRFTGLYPFSPKSNEPIAEGTVFPDEAMG

Sequences:

>Translated_109_residues
MHNISAKKFLGYLKNKCLEFGVKVIEGNPAYTSIKCPNCGSRLSQLYKLADERALPSRLMYCFDCGFYADRDTVAVFNLI
KRFTGLYPFSPKSNEPIAEGTVFPDEAMG
>Mature_109_residues
MHNISAKKFLGYLKNKCLEFGVKVIEGNPAYTSIKCPNCGSRLSQLYKLADERALPSRLMYCFDCGFYADRDTVAVFNLI
KRFTGLYPFSPKSNEPIAEGTVFPDEAMG

Specific function: Unknown

COG id: COG0675

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase 35 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y85A_METJA (P81315)

Other databases:

- EMBL:   L77117
- RefSeq:   NP_247851.1
- ProteinModelPortal:   P81315
- GeneID:   1451745
- GenomeReviews:   L77117_GR
- KEGG:   mja:MJ_0856.1
- NMPDR:   fig|243232.1.peg.888
- TIGR:   MJ0856.1
- BioCyc:   MJAN243232:MJ_0856.1-MONOMER
- GO:   GO:0032196
- InterPro:   IPR010095

Pfam domain/function: PF07282 Transposase_35

EC number: NA

Molecular weight: Translated: 12230; Mature: 12230

Theoretical pI: Translated: 8.47; Mature: 8.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.6 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
7.3 %Cys+Met (Translated Protein)
4.6 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
7.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHNISAKKFLGYLKNKCLEFGVKVIEGNPAYTSIKCPNCGSRLSQLYKLADERALPSRLM
CCCCHHHHHHHHHHHHHHHHCCEEECCCCCEEEEECCCHHHHHHHHHHHHHHCCCHHHHH
YCFDCGFYADRDTVAVFNLIKRFTGLYPFSPKSNEPIAEGTVFPDEAMG
HHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MHNISAKKFLGYLKNKCLEFGVKVIEGNPAYTSIKCPNCGSRLSQLYKLADERALPSRLM
CCCCHHHHHHHHHHHHHHHHCCEEECCCCCEEEEECCCHHHHHHHHHHHHHHCCCHHHHH
YCFDCGFYADRDTVAVFNLIKRFTGLYPFSPKSNEPIAEGTVFPDEAMG
HHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087