| Definition | Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome. |
|---|---|
| Accession | NC_000909 |
| Length | 1,664,970 |
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The map label for this gene is 15669026
Identifier: 15669026
GI number: 15669026
Start: 762426
End: 762785
Strand: Reverse
Name: 15669026
Synonym: MJ0836
Alternate gene names: NA
Gene position: 762785-762426 (Counterclockwise)
Preceding gene: 15669029
Following gene: 15669025
Centisome position: 45.81
GC content: 32.22
Gene sequence:
>360_bases ATGATAGAATTAGCTAAAAATCATCTAAAGAAAGTTTTAGAAGTTTGTGGAGCTAACAGAAATTGTGAATATTACCCATG CCACTTTGATGGACAGGTTTGCTTATGGTGTTACTGCCCTTTCTATCCATGTGAAGATGAAGAATTAGGAGAGTATGTTG AAAAAAAAGATGGAACAAAGATTTGGAGTTGTATGAAGTGTTTTTGGGTTCATAGGGAAGATGTTGCCACTGAAATCTTA AGAGAAATTTTAAATTTAACCAAAGATAAAGATATAGATGAGGCTTTAAAGCTCTTAGATAACCATGAGTTGATGTTAAA AATAAAAGATAGGGTTAAAGCCAAATATCCAAATAGGTGA
Upstream 100 bases:
>100_bases TTCCGCCAATTTTATTAACCTCTCCATTAAAATCCCTCCCTAAATTTTAAATACATCTAAAAGTAAAAATAATATTTAAT CTATTTAAAGGTGTTGTATA
Downstream 100 bases:
>100_bases AATTGTGGATTTGCTAAATGTAGTTTATATTATTAACTTTATTTTACTCCTTTTAGCAGCAATAACTGATATTAAAGAAA GAATTATTCCTCATAAATAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 119; Mature: 119
Protein sequence:
>119_residues MIELAKNHLKKVLEVCGANRNCEYYPCHFDGQVCLWCYCPFYPCEDEELGEYVEKKDGTKIWSCMKCFWVHREDVATEIL REILNLTKDKDIDEALKLLDNHELMLKIKDRVKAKYPNR
Sequences:
>Translated_119_residues MIELAKNHLKKVLEVCGANRNCEYYPCHFDGQVCLWCYCPFYPCEDEELGEYVEKKDGTKIWSCMKCFWVHREDVATEIL REILNLTKDKDIDEALKLLDNHELMLKIKDRVKAKYPNR >Mature_119_residues MIELAKNHLKKVLEVCGANRNCEYYPCHFDGQVCLWCYCPFYPCEDEELGEYVEKKDGTKIWSCMKCFWVHREDVATEIL REILNLTKDKDIDEALKLLDNHELMLKIKDRVKAKYPNR
Specific function: Unknown
COG id: COG2158
COG function: function code R; Uncharacterized protein containing a Zn-finger-like domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y836_METJA (Q58246)
Other databases:
- EMBL: L77117 - PIR: D64404 - RefSeq: NP_247830.1 - GeneID: 1451722 - GenomeReviews: L77117_GR - KEGG: mja:MJ_0836 - NMPDR: fig|243232.1.peg.867 - TIGR: MJ0836 - HOGENOM: HBG541264 - OMA: CLWCYCP - ProtClustDB: CLSK876357 - BioCyc: MJAN243232:MJ_0836-MONOMER - InterPro: IPR007212
Pfam domain/function: PF04071 zf-like
EC number: NA
Molecular weight: Translated: 14177; Mature: 14177
Theoretical pI: Translated: 6.10; Mature: 6.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
7.6 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 10.1 %Cys+Met (Translated Protein) 7.6 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 10.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIELAKNHLKKVLEVCGANRNCEYYPCHFDGQVCLWCYCPFYPCEDEELGEYVEKKDGTK CCCHHHHHHHHHHHHHCCCCCCCEECCCCCCCEEEEEECCCCCCCHHHHHHHHHHCCCHH IWSCMKCFWVHREDVATEILREILNLTKDKDIDEALKLLDNHELMLKIKDRVKAKYPNR HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHEEEEHHHHHCCCCCC >Mature Secondary Structure MIELAKNHLKKVLEVCGANRNCEYYPCHFDGQVCLWCYCPFYPCEDEELGEYVEKKDGTK CCCHHHHHHHHHHHHHCCCCCCCEECCCCCCCEEEEEECCCCCCCHHHHHHHHHHCCCHH IWSCMKCFWVHREDVATEILREILNLTKDKDIDEALKLLDNHELMLKIKDRVKAKYPNR HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHEEEEHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087