| Definition | Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome. |
|---|---|
| Accession | NC_000909 |
| Length | 1,664,970 |
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The map label for this gene is 15669023
Identifier: 15669023
GI number: 15669023
Start: 759818
End: 760951
Strand: Reverse
Name: 15669023
Synonym: MJ0835
Alternate gene names: NA
Gene position: 760951-759818 (Counterclockwise)
Preceding gene: 15669024
Following gene: 15669022
Centisome position: 45.7
GC content: 28.04
Gene sequence:
>1134_bases ATGGTAGATACTTCAAAAATTAAAGCATTAAAAGAGAAAAGTAGAAGAACGGTGAAATCTGGTTCATTAAAATTTATATT GATAATACTGGTTGTTGTAATTGTTGGGTTATTAGCATTTATCGCATATAATGAAATCAGTAACCTACAGTTTCAAGAAA AAATAACGCTTGAAAACCAGAAAAAAGCAGCTATTGAATCAATAAATCAGATGTTTGCCAAATACCCTAACGACCCACAA AAACTAATATATATAAACAAAATCCAAATGGCGAATAATATTGAAGAAATTAACGAAGTGTTGGAAGAAGCTAAAAAGTA CATTAGCTTTAAAAATTATAAAATTGAGGCTATTAACCAAATAAAAAGTATGTATGGGGAATATTATTCTCTAAGTTTAT CTGCTCAGGAATTAGTGCATAAAATAAGCTTGGCACAATCTACTGAAGAGATTGAAAATCTATTAAAGTCTGTTGATATA GAAAAAGACATTAGGAGCATCATAGAAAAGCAGATTGATTATGTTTTAGCCTCAGGAGATAAATATTATTATGTAGAAAT TAATGGAAAATCCATGTTTATGACAAGAGATGAAATTCTTAAATATAAAAAATTCTGGACATTATCCGAACTCAAATCTC TAAAAATAACTCCAGTATCACAATTAAATAAAGTAGCAATTGAAATATCTGCAAAACAGTGTGGTAAGTTACCACATAAA GGAGATATAATTTCAATATACAGTAAAGACGGTTCGTTCATAACATATGGTATCATAGATTCATCCTATGTAATTTTATC CTCTATAAGTTACAGTGAAAGTAAATCAACATCAAGTAATATAAATGAGCTTGGAGAATCTTACTCCTCATCTTCCTCTT CAAGTATATCTTACTCATTAAATAACCTTCCAGGCATATTACATGCAACAGTCATAGACAGACTCGATTACGATAAAATA AAAAAGATGTTTGGAGAATATGGAAAAAAATTAAATGAAATTGAAGATGATACTCAAATATTCGATGAAAATGTTAATTA TTTCTTAATTATCTCAATTCCTGATGATAAAATTCCTGACATAATACAAATAGACCCTAAAGATATAGTTATTGTAATAA AGTCCAAAGAATAA
Upstream 100 bases:
>100_bases CACAAAAATAAACCAAAGTGAATATAATATAACCGTAAATCCATAATAGGCCATGATAACAAACCATATAATTTTGTAAT ATTAAAGTTAGGGTGATTGT
Downstream 100 bases:
>100_bases GTCCAGGGATTTGAGTTAAGGGATGTTTATGGATTATAAATATTTTTTTATAACCATTATCCTAATTTCCATATTTTGTG GATGTTACGAAAAATCATAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 377; Mature: 377
Protein sequence:
>377_residues MVDTSKIKALKEKSRRTVKSGSLKFILIILVVVIVGLLAFIAYNEISNLQFQEKITLENQKKAAIESINQMFAKYPNDPQ KLIYINKIQMANNIEEINEVLEEAKKYISFKNYKIEAINQIKSMYGEYYSLSLSAQELVHKISLAQSTEEIENLLKSVDI EKDIRSIIEKQIDYVLASGDKYYYVEINGKSMFMTRDEILKYKKFWTLSELKSLKITPVSQLNKVAIEISAKQCGKLPHK GDIISIYSKDGSFITYGIIDSSYVILSSISYSESKSTSSNINELGESYSSSSSSSISYSLNNLPGILHATVIDRLDYDKI KKMFGEYGKKLNEIEDDTQIFDENVNYFLIISIPDDKIPDIIQIDPKDIVIVIKSKE
Sequences:
>Translated_377_residues MVDTSKIKALKEKSRRTVKSGSLKFILIILVVVIVGLLAFIAYNEISNLQFQEKITLENQKKAAIESINQMFAKYPNDPQ KLIYINKIQMANNIEEINEVLEEAKKYISFKNYKIEAINQIKSMYGEYYSLSLSAQELVHKISLAQSTEEIENLLKSVDI EKDIRSIIEKQIDYVLASGDKYYYVEINGKSMFMTRDEILKYKKFWTLSELKSLKITPVSQLNKVAIEISAKQCGKLPHK GDIISIYSKDGSFITYGIIDSSYVILSSISYSESKSTSSNINELGESYSSSSSSSISYSLNNLPGILHATVIDRLDYDKI KKMFGEYGKKLNEIEDDTQIFDENVNYFLIISIPDDKIPDIIQIDPKDIVIVIKSKE >Mature_377_residues MVDTSKIKALKEKSRRTVKSGSLKFILIILVVVIVGLLAFIAYNEISNLQFQEKITLENQKKAAIESINQMFAKYPNDPQ KLIYINKIQMANNIEEINEVLEEAKKYISFKNYKIEAINQIKSMYGEYYSLSLSAQELVHKISLAQSTEEIENLLKSVDI EKDIRSIIEKQIDYVLASGDKYYYVEINGKSMFMTRDEILKYKKFWTLSELKSLKITPVSQLNKVAIEISAKQCGKLPHK GDIISIYSKDGSFITYGIIDSSYVILSSISYSESKSTSSNINELGESYSSSSSSSISYSLNNLPGILHATVIDRLDYDKI KKMFGEYGKKLNEIEDDTQIFDENVNYFLIISIPDDKIPDIIQIDPKDIVIVIKSKE
Specific function: Unknown
COG id: COG1627
COG function: function code S; Uncharacterized protein conserved in archaea
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential)
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y835_METJA (Q58245)
Other databases:
- EMBL: L77117 - PIR: C64404 - RefSeq: NP_247827.1 - ProteinModelPortal: Q58245 - GeneID: 1451719 - GenomeReviews: L77117_GR - KEGG: mja:MJ_0835 - NMPDR: fig|243232.1.peg.864 - TIGR: MJ0835 - HOGENOM: HBG541023 - OMA: QIFDENV - ProtClustDB: CLSK876354 - BioCyc: MJAN243232:MJ_0835-MONOMER - InterPro: IPR007509
Pfam domain/function: PF04415 DUF515
EC number: NA
Molecular weight: Translated: 42951; Mature: 42951
Theoretical pI: Translated: 5.93; Mature: 5.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0xd3ff70c)-; HASH(0xd65ce44)-;
Cys/Met content:
0.3 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVDTSKIKALKEKSRRTVKSGSLKFILIILVVVIVGLLAFIAYNEISNLQFQEKITLENQ CCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEHHHCCCCCH KKAAIESINQMFAKYPNDPQKLIYINKIQMANNIEEINEVLEEAKKYISFKNYKIEAINQ HHHHHHHHHHHHHHCCCCCHHEEEEEEHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHH IKSMYGEYYSLSLSAQELVHKISLAQSTEEIENLLKSVDIEKDIRSIIEKQIDYVLASGD HHHHHCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHEEEECCC KYYYVEINGKSMFMTRDEILKYKKFWTLSELKSLKITPVSQLNKVAIEISAKQCGKLPHK EEEEEEECCCEEEEEHHHHHHHHHHHHHHHHHCCCCCCHHHHCEEEEEEEHHHHCCCCCC GDIISIYSKDGSFITYGIIDSSYVILSSISYSESKSTSSNINELGESYSSSSSSSISYSL CCEEEEEECCCCEEEEEEECCCEEEEEECCCCCCCCCCCHHHHHHHHHCCCCCCCEEEEC NNLPGILHATVIDRLDYDKIKKMFGEYGKKLNEIEDDTQIFDENVNYFLIISIPDDKIPD CCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCEEEEEECCCCCCCC IIQIDPKDIVIVIKSKE EEEECCCCEEEEEECCH >Mature Secondary Structure MVDTSKIKALKEKSRRTVKSGSLKFILIILVVVIVGLLAFIAYNEISNLQFQEKITLENQ CCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEHHHCCCCCH KKAAIESINQMFAKYPNDPQKLIYINKIQMANNIEEINEVLEEAKKYISFKNYKIEAINQ HHHHHHHHHHHHHHCCCCCHHEEEEEEHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHH IKSMYGEYYSLSLSAQELVHKISLAQSTEEIENLLKSVDIEKDIRSIIEKQIDYVLASGD HHHHHCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHEEEECCC KYYYVEINGKSMFMTRDEILKYKKFWTLSELKSLKITPVSQLNKVAIEISAKQCGKLPHK EEEEEEECCCEEEEEHHHHHHHHHHHHHHHHHCCCCCCHHHHCEEEEEEEHHHHCCCCCC GDIISIYSKDGSFITYGIIDSSYVILSSISYSESKSTSSNINELGESYSSSSSSSISYSL CCEEEEEECCCCEEEEEEECCCEEEEEECCCCCCCCCCCHHHHHHHHHCCCCCCCEEEEC NNLPGILHATVIDRLDYDKIKKMFGEYGKKLNEIEDDTQIFDENVNYFLIISIPDDKIPD CCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCEEEEEECCCCCCCC IIQIDPKDIVIVIKSKE EEEECCCCEEEEEECCH
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8688087