| Definition | Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome. |
|---|---|
| Accession | NC_000909 |
| Length | 1,664,970 |
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The map label for this gene is 15668955
Identifier: 15668955
GI number: 15668955
Start: 695227
End: 696456
Strand: Direct
Name: 15668955
Synonym: MJ0774
Alternate gene names: NA
Gene position: 695227-696456 (Clockwise)
Preceding gene: 15668953
Following gene: 15668956
Centisome position: 41.76
GC content: 34.31
Gene sequence:
>1230_bases ATGGACCCAATAGAGTTTATACAAAAATCTGCAAGCTCTATAGCAAGCACCATGCATAAATTAAAATTAAAATACAATCC ATTTTCTGAAAAGCCAATAAGGGGAAATACAAAGTTTTTTGTAGGTAGAGTTAGCGAGTTAAGGGAAATTGGAGAAATTT TAGGTTCTGCATTGCATGGTAGTGTTGCTAACGCTGCAATAGTTGGAACTAAGGGGATAGGGAAGAGTTCAATGCTAAAC ATCATATACTATGCAACAAAAAAGCAGGGACATTGGGTTGTTGAGATGACTGCCTCTCAGGTAACACCAAGGCAGTTTTT GATACAGCTCTTATACAATATATTAACTGAAAACATCATAACCATGAGTGGAACGATAAAATCTGATTACATGGAACATT CAAGTAGAATTTTAGATATGTATAGGAAGTTAAACAACTATGGGGATAAAGTTCCTATCCACTATCCAAGGGAGAGGATT GAGAGGGATTTGGAATATCTAATAAATGAAGTTAAAAGTCCTGATAAGTTATGTATAATTTTAATTGATGAAGCTGACCA ATTTGCAAAAAAGAGCTGTTTAAGTTTATTACAATTTTTCCACTCGTTTTTGTATGAAGAGGGAATTTTAACGTTTATGG CTGGTTCTCCAACATTGATGGATGATTTAACAAAGATATCTCCACCAATAAAGGATAGAATTCCAAAAATAATAAATATG CCTCCTTTATCAAAAGATGAGTCCTATGATTTAATTAGAAGAAGATTGGAAGATGCTCATATTGATGGAGCAGAGGAGTT TGAGCCGTTTACTGAAGAGGCTATTCATAAAATTGTTGAAGAGTGTGACGGAATTCCAAGAAAGATAATAATGACATGCT CTGAATCAATATCAATAGCTATAAGAAAGGGTTTAACTAAAATAGATGAGAAGGTTGTTAAAGAGGCTATGCATTCTCTT GGCATTAGTGTAGGACATCAAATTCTAAACCACTTAACTCCTGCCCAATCAGAGATTGTTAGGGCAATGGCTGAGCTTGG AGGTTCAGCAACGGTAACACAATTAGCTGAATATTTAAAAAAATCACCAAGTACTATTGGAACTCATCTCTCTGACATCT ATGAGATGGGATATATTTATAAAGAAAGGGAAGGAAACAACGTATATTATAAACTATCTAAAGAACTTAGGGATGTCTTA ATAGGTGAAGATGATGAATTGGAGATGTGA
Upstream 100 bases:
>100_bases CGTTCTTAAGACAAAAGTTCGAAATCAATGGAAAATATTGTAGATAATTAGTAGATAATTAATTTAAATAAATTAATTTA TATTTTATTGCGGTGGAAAC
Downstream 100 bases:
>100_bases TGTTCAAAATTTTGAGCCAGATGTTAAAATATCATTAACAAGAGTTGGAGTTACAAATCTAAAAAAACTTGTTAGATTAA AGAGAACAAATAAAAGACCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 409; Mature: 409
Protein sequence:
>409_residues MDPIEFIQKSASSIASTMHKLKLKYNPFSEKPIRGNTKFFVGRVSELREIGEILGSALHGSVANAAIVGTKGIGKSSMLN IIYYATKKQGHWVVEMTASQVTPRQFLIQLLYNILTENIITMSGTIKSDYMEHSSRILDMYRKLNNYGDKVPIHYPRERI ERDLEYLINEVKSPDKLCIILIDEADQFAKKSCLSLLQFFHSFLYEEGILTFMAGSPTLMDDLTKISPPIKDRIPKIINM PPLSKDESYDLIRRRLEDAHIDGAEEFEPFTEEAIHKIVEECDGIPRKIIMTCSESISIAIRKGLTKIDEKVVKEAMHSL GISVGHQILNHLTPAQSEIVRAMAELGGSATVTQLAEYLKKSPSTIGTHLSDIYEMGYIYKEREGNNVYYKLSKELRDVL IGEDDELEM
Sequences:
>Translated_409_residues MDPIEFIQKSASSIASTMHKLKLKYNPFSEKPIRGNTKFFVGRVSELREIGEILGSALHGSVANAAIVGTKGIGKSSMLN IIYYATKKQGHWVVEMTASQVTPRQFLIQLLYNILTENIITMSGTIKSDYMEHSSRILDMYRKLNNYGDKVPIHYPRERI ERDLEYLINEVKSPDKLCIILIDEADQFAKKSCLSLLQFFHSFLYEEGILTFMAGSPTLMDDLTKISPPIKDRIPKIINM PPLSKDESYDLIRRRLEDAHIDGAEEFEPFTEEAIHKIVEECDGIPRKIIMTCSESISIAIRKGLTKIDEKVVKEAMHSL GISVGHQILNHLTPAQSEIVRAMAELGGSATVTQLAEYLKKSPSTIGTHLSDIYEMGYIYKEREGNNVYYKLSKELRDVL IGEDDELEM >Mature_409_residues MDPIEFIQKSASSIASTMHKLKLKYNPFSEKPIRGNTKFFVGRVSELREIGEILGSALHGSVANAAIVGTKGIGKSSMLN IIYYATKKQGHWVVEMTASQVTPRQFLIQLLYNILTENIITMSGTIKSDYMEHSSRILDMYRKLNNYGDKVPIHYPRERI ERDLEYLINEVKSPDKLCIILIDEADQFAKKSCLSLLQFFHSFLYEEGILTFMAGSPTLMDDLTKISPPIKDRIPKIINM PPLSKDESYDLIRRRLEDAHIDGAEEFEPFTEEAIHKIVEECDGIPRKIIMTCSESISIAIRKGLTKIDEKVVKEAMHSL GISVGHQILNHLTPAQSEIVRAMAELGGSATVTQLAEYLKKSPSTIGTHLSDIYEMGYIYKEREGNNVYYKLSKELRDVL IGEDDELEM
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HTH arsR-type DNA-binding domain
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y774_METJA (Q58184)
Other databases:
- EMBL: L77117 - PIR: F64396 - RefSeq: NP_247759.1 - ProteinModelPortal: Q58184 - GeneID: 1451651 - GenomeReviews: L77117_GR - KEGG: mja:MJ_0774 - NMPDR: fig|243232.1.peg.796 - TIGR: MJ0774 - HOGENOM: HBG540964 - OMA: TIGTHLS - ProtClustDB: CLSK876326 - BioCyc: MJAN243232:MJ_0774-MONOMER - GO: GO:0005622 - InterPro: IPR003593 - InterPro: IPR011579 - InterPro: IPR001845 - InterPro: IPR011991 - Gene3D: G3DSA:1.10.10.10 - SMART: SM00382 - SMART: SM00418
Pfam domain/function: PF01637 Arch_ATPase; PF01022 HTH_5
EC number: NA
Molecular weight: Translated: 46329; Mature: 46329
Theoretical pI: Translated: 6.25; Mature: 6.25
Prosite motif: PS00846 HTH_ARSR_1; PS50987 HTH_ARSR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDPIEFIQKSASSIASTMHKLKLKYNPFSEKPIRGNTKFFVGRVSELREIGEILGSALHG CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC SVANAAIVGTKGIGKSSMLNIIYYATKKQGHWVVEMTASQVTPRQFLIQLLYNILTENII HHHHHEEEECCCCCHHHHHHHHEEEECCCCCEEEEECCHHCCHHHHHHHHHHHHHHHHHH TMSGTIKSDYMEHSSRILDMYRKLNNYGDKVPIHYPRERIERDLEYLINEVKSPDKLCII CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEE LIDEADQFAKKSCLSLLQFFHSFLYEEGILTFMAGSPTLMDDLTKISPPIKDRIPKIINM EECCHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHCCCCHHHHCCHHCCC PPLSKDESYDLIRRRLEDAHIDGAEEFEPFTEEAIHKIVEECDGIPRKIIMTCSESISIA CCCCCCCCHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH IRKGLTKIDEKVVKEAMHSLGISVGHQILNHLTPAQSEIVRAMAELGGSATVTQLAEYLK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHH KSPSTIGTHLSDIYEMGYIYKEREGNNVYYKLSKELRDVLIGEDDELEM CCCCHHHHHHHHHHHHHHHHEECCCCCEEEEEHHHHHHHHCCCCCCCCC >Mature Secondary Structure MDPIEFIQKSASSIASTMHKLKLKYNPFSEKPIRGNTKFFVGRVSELREIGEILGSALHG CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC SVANAAIVGTKGIGKSSMLNIIYYATKKQGHWVVEMTASQVTPRQFLIQLLYNILTENII HHHHHEEEECCCCCHHHHHHHHEEEECCCCCEEEEECCHHCCHHHHHHHHHHHHHHHHHH TMSGTIKSDYMEHSSRILDMYRKLNNYGDKVPIHYPRERIERDLEYLINEVKSPDKLCII CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEE LIDEADQFAKKSCLSLLQFFHSFLYEEGILTFMAGSPTLMDDLTKISPPIKDRIPKIINM EECCHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHCCCCHHHHCCHHCCC PPLSKDESYDLIRRRLEDAHIDGAEEFEPFTEEAIHKIVEECDGIPRKIIMTCSESISIA CCCCCCCCHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH IRKGLTKIDEKVVKEAMHSLGISVGHQILNHLTPAQSEIVRAMAELGGSATVTQLAEYLK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHH KSPSTIGTHLSDIYEMGYIYKEREGNNVYYKLSKELRDVLIGEDDELEM CCCCHHHHHHHHHHHHHHHHEECCCCCEEEEEHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087