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The map label for this gene is yccM [C]

Identifier: 15668930

GI number: 15668930

Start: 675147

End: 675887

Strand: Reverse

Name: yccM [C]

Synonym: MJ0749

Alternate gene names: 15668930

Gene position: 675887-675147 (Counterclockwise)

Preceding gene: 15668931

Following gene: 15668929

Centisome position: 40.59

GC content: 28.07

Gene sequence:

>741_bases
TTGGATTCCAGAGTTTATATTATAAAGTTTGATAATTGGGGTTTTATGGTGAATCTTATGAATAAAATACAAATATTGAG
GAAAATATCTCAAACATTATTTTTTGTGAGAGCTTTAATAGTTACTGGTTTTTATTTGAGTATTGTAGGATTTATTAAGA
GATTTATTATAGGAGATAGGATATTAGCTACTATAATAACAAAAATCATCGCTATAGTATTGGCGTTTATTGCTGGAAGG
GTTTTTTGTGGATGGATGTGTCCATTTGGATTTTTATTTAATTTAGTTTATGAGTTGAGGGTAAAACTCTTTAAATTAAA
AAAACTACCAACAGTTGATGAGAAAATTCACAATAAATTAATTTATTTTAAGTATGTTGTGCTAATTTTAGTGGTTTTAG
CATACCTATCTGGAGTTAAAATCTCTGGATATACATTGGCATATCTGCTGTTGGCTTTATTTTTAGTTTTAGGATTTATT
TATCCAATGTTCTTCTGCAGATATGTTTGTCCAGTGGGGTCTTTGTTGAGTATATTTGCGAGATTCTCAATCTTTAAACT
GAAACTTGATGAAAATAAATGTGTAGGTTGTAGATTGTGTGAAAGAAAATGTCCAATGCAGATAAAAATAACAGAAAAAA
TAGACCAGATGGAGTGTATAAGATGTTTTGAATGCATGAGTGTATGTAAAAAAGGAGCATTATCTTTTTCAGCTTTTACT
AAAAATACTAAAAAAGAATAA

Upstream 100 bases:

>100_bases
ACTTCTATTTTTTATTAACAATTATACAAATTTTTTATTAGATTTATCTAATTTTTATCCTCCTATTTTTAAAATATCTG
GCTAAAAATCTTTTTATATT

Downstream 100 bases:

>100_bases
TTCCAATATACACATATTTGAAAAATAAAATTAAAACAATTTATATAAATCTTTAAGTAAATTTTATTTATATTGTGAAA
TAGTATTTTCAAATTTAGCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 246; Mature: 246

Protein sequence:

>246_residues
MDSRVYIIKFDNWGFMVNLMNKIQILRKISQTLFFVRALIVTGFYLSIVGFIKRFIIGDRILATIITKIIAIVLAFIAGR
VFCGWMCPFGFLFNLVYELRVKLFKLKKLPTVDEKIHNKLIYFKYVVLILVVLAYLSGVKISGYTLAYLLLALFLVLGFI
YPMFFCRYVCPVGSLLSIFARFSIFKLKLDENKCVGCRLCERKCPMQIKITEKIDQMECIRCFECMSVCKKGALSFSAFT
KNTKKE

Sequences:

>Translated_246_residues
MDSRVYIIKFDNWGFMVNLMNKIQILRKISQTLFFVRALIVTGFYLSIVGFIKRFIIGDRILATIITKIIAIVLAFIAGR
VFCGWMCPFGFLFNLVYELRVKLFKLKKLPTVDEKIHNKLIYFKYVVLILVVLAYLSGVKISGYTLAYLLLALFLVLGFI
YPMFFCRYVCPVGSLLSIFARFSIFKLKLDENKCVGCRLCERKCPMQIKITEKIDQMECIRCFECMSVCKKGALSFSAFT
KNTKKE
>Mature_246_residues
MDSRVYIIKFDNWGFMVNLMNKIQILRKISQTLFFVRALIVTGFYLSIVGFIKRFIIGDRILATIITKIIAIVLAFIAGR
VFCGWMCPFGFLFNLVYELRVKLFKLKKLPTVDEKIHNKLIYFKYVVLILVVLAYLSGVKISGYTLAYLLLALFLVLGFI
YPMFFCRYVCPVGSLLSIFARFSIFKLKLDENKCVGCRLCERKCPMQIKITEKIDQMECIRCFECMSVCKKGALSFSAFT
KNTKKE

Specific function: Unknown

COG id: COG0348

COG function: function code C; Polyferredoxin

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 4Fe-4S ferredoxin-type domains

Homologues:

Organism=Escherichia coli, GI1787226, Length=238, Percent_Identity=25.6302521008403, Blast_Score=74, Evalue=8e-15,
Organism=Escherichia coli, GI1788532, Length=205, Percent_Identity=22.9268292682927, Blast_Score=64, Evalue=9e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y749_METJA (Q58159)

Other databases:

- EMBL:   L77117
- PIR:   E64393
- RefSeq:   NP_247734.1
- ProteinModelPortal:   Q58159
- SMR:   Q58159
- GeneID:   1451626
- GenomeReviews:   L77117_GR
- KEGG:   mja:MJ_0749
- NMPDR:   fig|243232.1.peg.771
- TIGR:   MJ0749
- HOGENOM:   HBG539111
- OMA:   PITEMNT
- ProtClustDB:   CLSK876316
- BioCyc:   MJAN243232:MJ_0749-MONOMER
- GO:   GO:0006810
- InterPro:   IPR017896
- InterPro:   IPR017900

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28500; Mature: 28500

Theoretical pI: Translated: 10.12; Mature: 10.12

Prosite motif: PS00198 4FE4S_FER_1; PS51379 4FE4S_FER_2; PS00041 HTH_ARAC_FAMILY_1

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xd687c38)-; HASH(0xd27f4b4)-; HASH(0xc7aac48)-; HASH(0xd55eb00)-;

Cys/Met content:

4.9 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
8.1 %Cys+Met (Translated Protein)
4.9 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
8.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCCCH
>Mature Secondary Structure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CCCCCH

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8688087