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The map label for this gene is cooS

Identifier: 15668909

GI number: 15668909

Start: 660574

End: 662448

Strand: Reverse

Name: cooS

Synonym: MJ0728

Alternate gene names: 15668909

Gene position: 662448-660574 (Counterclockwise)

Preceding gene: 15668911

Following gene: 15668908

Centisome position: 39.79

GC content: 39.89

Gene sequence:

>1875_bases
ATGAAAAACTGCATCGCTGCTATTCCAGAAGTTAAGGAAATGGTTGAAAAGGCAAAGTTAAAGGGTATAGAAACTCCTCA
CACAAGATTCCCAAATCAATTCCCAAAGTGTCCTTACGGGTTAAAAGGGGTTTATTGCATATTATGTGCTAATGGACCTT
GTAGAATAACAGAAAAAACTCCTTACGGTGTTTGTGGAGCAACAGCAGATGTTATTGTAGCAAGAAACCTCTGCAGAGCG
GTTGCTGCTGGAACATCATGTTATGTCCATTGTGCTGAAAACGCTGCAAGAGCTTTATTATCAGCAGGTAAAGGAGAAGG
AAGCTATGAAATAAGAAACGAGAAAAAATTAAAGTTTTTAGCGAAAAAACTTGGCTTTGATGCAAATAAAGATGCTAAGC
AGTTGGCTGTTGAAGTTGCTGAGTTCATATTAGATGATATGTACAAACCAAGATGGGAGAAGAGTGAATTAGTTCCAAAA
CTCTGTCCAGAGAAGAGATTAGAAGTATTTGAGAAGTTAGATATCCTTCCAGGAGGGGCTAAGGGAGAGATTGTTGATGC
ATTAACAAAGACTTCAACAAACTTAAACAGCAATCCAATGGACTTATTGGTTCACTGCCTTAGATTAGGATTGCACGCAG
GATTTACAGGGCTTTTAATGACTTGCTGGTTAAACGACATCTTATTTGGTTCACCAAAGATTACAGTAGTTGAGAATGGA
TTCAGTTCAGTTAAGCCAAACAACGTTAATATCATGATTACTGGACACCAGCACGCTTTAATCCAGCCATTATGTGAGGC
TGCAATGGAGGAAGACTTAATAAAAATGGCAAAAGAAGCTGGAGCTGATGAGATTAAGATTATTGGAGCTACATGTAACG
GACAAGATATGGAAACAAGAATTGCCCACTTACCAGAAAGCTTCGTTGGTTACATAGCAAACAACTTCACAACAGAGCCA
TTGGTTGCAACTGGTTTAATTGATGCTGTTGTCTCTGAATTCAACTGTACATTCCACGGATTGAAATTTGTCGCTGAAAA
AACTAAGACAAAATTAATCTGTATTGATGACATGGCTTACGTTGAGGGAGCTGAATACATCCCATGGGAGCCAGAGAATG
CTAAAGAAAAGGCAAGAGAGATAATTAAGAAAGCAATTGAGGCATTCAAAGAGAGAAAAGGAATGCAGAAGGATTACTAC
GATGAGAAAGTTAAATCAGTTGTTGGAGTTGGAGAGGAATCATTGGTTGAGTTCTTAGGAGGAAGTGTCAAGCCATTAAT
TGAATTGATTGCAAGTGGTAAAATCAAAGGGGTTGTTGGAGTCGTTGGATGTTCAAACTTGGCAAGTGGAGGACACGACA
ACATAATTGTCACATTAACAAAAGAGCTCATTAAAAGAGATATCTTAGTCTTAGCAGGAGGTTGTGTAAACAGCCCATTG
AAACACGCAGGTCTCTTTGACCCTGCAAGTGCTGAGTTAGCTGGAGAGAACTTAAAAGAAGTCTGTAAGAGCTTAGGAAT
CCCACCAGTCTTAAACTTCGGAGCATGTTTGAGTATTGCAAGAATTGAGCAGGTTGCAGTTGCAATTGCTGAAGAGTTGG
GAGTTGATATTCCAGATTTACCAGTTGCTGCCTCAGCACCACAGTGGTTGGAAGAGCAGGCATTGGCAGATGCAACCTAC
GCAGTTGATATGGGCTTTACTGTCCATGTTTCACCAGTTCCATTCGTTACTGGCAGTGAGTTAGTAACAAAGGTTTTAAC
TGAAGCAGTTGAGGGCTTAACAGGGGGTAAATTAATCCCAGAACCAAACCCATACAAGGCAGCTGATTTATTGGAGCAAA
CAATCATGGAGAAGAGGAAAAAACTTGGAATCTAA

Upstream 100 bases:

>100_bases
TGCAAAACTTAAAGACGATTTCCAAACCGTTAATGTTATTTATTCGTTAATATATTAATGATTATCGTAAAACAAGTTAA
AAATATGTTTGGTGATAGGT

Downstream 100 bases:

>100_bases
TTAAATTCTTTTTAAACTTTTAAAACATTTTAAAAAGGTGGAATTATGAAAATTAGAGGGTTTGAAAGCTCAATGATGGG
GAAAGATATAGATTTTATTC

Product: carbon monoxide dehydrogenase catalytic subunit CooS

Products: NA

Alternate protein names: CODH

Number of amino acids: Translated: 624; Mature: 624

Protein sequence:

>624_residues
MKNCIAAIPEVKEMVEKAKLKGIETPHTRFPNQFPKCPYGLKGVYCILCANGPCRITEKTPYGVCGATADVIVARNLCRA
VAAGTSCYVHCAENAARALLSAGKGEGSYEIRNEKKLKFLAKKLGFDANKDAKQLAVEVAEFILDDMYKPRWEKSELVPK
LCPEKRLEVFEKLDILPGGAKGEIVDALTKTSTNLNSNPMDLLVHCLRLGLHAGFTGLLMTCWLNDILFGSPKITVVENG
FSSVKPNNVNIMITGHQHALIQPLCEAAMEEDLIKMAKEAGADEIKIIGATCNGQDMETRIAHLPESFVGYIANNFTTEP
LVATGLIDAVVSEFNCTFHGLKFVAEKTKTKLICIDDMAYVEGAEYIPWEPENAKEKAREIIKKAIEAFKERKGMQKDYY
DEKVKSVVGVGEESLVEFLGGSVKPLIELIASGKIKGVVGVVGCSNLASGGHDNIIVTLTKELIKRDILVLAGGCVNSPL
KHAGLFDPASAELAGENLKEVCKSLGIPPVLNFGACLSIARIEQVAVAIAEELGVDIPDLPVAASAPQWLEEQALADATY
AVDMGFTVHVSPVPFVTGSELVTKVLTEAVEGLTGGKLIPEPNPYKAADLLEQTIMEKRKKLGI

Sequences:

>Translated_624_residues
MKNCIAAIPEVKEMVEKAKLKGIETPHTRFPNQFPKCPYGLKGVYCILCANGPCRITEKTPYGVCGATADVIVARNLCRA
VAAGTSCYVHCAENAARALLSAGKGEGSYEIRNEKKLKFLAKKLGFDANKDAKQLAVEVAEFILDDMYKPRWEKSELVPK
LCPEKRLEVFEKLDILPGGAKGEIVDALTKTSTNLNSNPMDLLVHCLRLGLHAGFTGLLMTCWLNDILFGSPKITVVENG
FSSVKPNNVNIMITGHQHALIQPLCEAAMEEDLIKMAKEAGADEIKIIGATCNGQDMETRIAHLPESFVGYIANNFTTEP
LVATGLIDAVVSEFNCTFHGLKFVAEKTKTKLICIDDMAYVEGAEYIPWEPENAKEKAREIIKKAIEAFKERKGMQKDYY
DEKVKSVVGVGEESLVEFLGGSVKPLIELIASGKIKGVVGVVGCSNLASGGHDNIIVTLTKELIKRDILVLAGGCVNSPL
KHAGLFDPASAELAGENLKEVCKSLGIPPVLNFGACLSIARIEQVAVAIAEELGVDIPDLPVAASAPQWLEEQALADATY
AVDMGFTVHVSPVPFVTGSELVTKVLTEAVEGLTGGKLIPEPNPYKAADLLEQTIMEKRKKLGI
>Mature_624_residues
MKNCIAAIPEVKEMVEKAKLKGIETPHTRFPNQFPKCPYGLKGVYCILCANGPCRITEKTPYGVCGATADVIVARNLCRA
VAAGTSCYVHCAENAARALLSAGKGEGSYEIRNEKKLKFLAKKLGFDANKDAKQLAVEVAEFILDDMYKPRWEKSELVPK
LCPEKRLEVFEKLDILPGGAKGEIVDALTKTSTNLNSNPMDLLVHCLRLGLHAGFTGLLMTCWLNDILFGSPKITVVENG
FSSVKPNNVNIMITGHQHALIQPLCEAAMEEDLIKMAKEAGADEIKIIGATCNGQDMETRIAHLPESFVGYIANNFTTEP
LVATGLIDAVVSEFNCTFHGLKFVAEKTKTKLICIDDMAYVEGAEYIPWEPENAKEKAREIIKKAIEAFKERKGMQKDYY
DEKVKSVVGVGEESLVEFLGGSVKPLIELIASGKIKGVVGVVGCSNLASGGHDNIIVTLTKELIKRDILVLAGGCVNSPL
KHAGLFDPASAELAGENLKEVCKSLGIPPVLNFGACLSIARIEQVAVAIAEELGVDIPDLPVAASAPQWLEEQALADATY
AVDMGFTVHVSPVPFVTGSELVTKVLTEAVEGLTGGKLIPEPNPYKAADLLEQTIMEKRKKLGI

Specific function: Unknown

COG id: COG1151

COG function: function code C; 6Fe-6S prismane cluster-containing protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the Ni-containing carbon monoxide dehydrogenase family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): COOS_METJA (Q58138)

Other databases:

- EMBL:   L77117
- PIR:   H64390
- RefSeq:   NP_247713.1
- ProteinModelPortal:   Q58138
- GeneID:   1451605
- GenomeReviews:   L77117_GR
- KEGG:   mja:MJ_0728
- NMPDR:   fig|243232.1.peg.750
- TIGR:   MJ0728
- HOGENOM:   HBG393174
- OMA:   NVGLMSP
- ProtClustDB:   CLSK862738
- BioCyc:   MJAN243232:MJ_0728-MONOMER
- BRENDA:   1.2.99.2
- GO:   GO:0005737
- InterPro:   IPR016101
- InterPro:   IPR010047
- InterPro:   IPR004137
- InterPro:   IPR011254
- InterPro:   IPR016099
- Gene3D:   G3DSA:1.20.1270.30
- Gene3D:   G3DSA:3.40.50.2030
- PIRSF:   PIRSF005023
- TIGRFAMs:   TIGR01702

Pfam domain/function: PF03063 Prismane; SSF56821 Prismane_like

EC number: =1.2.99.2

Molecular weight: Translated: 67409; Mature: 67409

Theoretical pI: Translated: 5.73; Mature: 5.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.2 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
3.2 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNCIAAIPEVKEMVEKAKLKGIETPHTRFPNQFPKCPYGLKGVYCILCANGPCRITEKT
CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEECCCC
PYGVCGATADVIVARNLCRAVAAGTSCYVHCAENAARALLSAGKGEGSYEIRNEKKLKFL
CCCCCCCHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHCCCCCCCEEECCHHHHHHH
AKKLGFDANKDAKQLAVEVAEFILDDMYKPRWEKSELVPKLCPEKRLEVFEKLDILPGGA
HHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHCCHHCCCHHHHHHHHHHCCCCCCC
KGEIVDALTKTSTNLNSNPMDLLVHCLRLGLHAGFTGLLMTCWLNDILFGSPKITVVENG
CCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCEEEEECC
FSSVKPNNVNIMITGHQHALIQPLCEAAMEEDLIKMAKEAGADEIKIIGATCNGQDMETR
CCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHH
IAHLPESFVGYIANNFTTEPLVATGLIDAVVSEFNCTFHGLKFVAEKTKTKLICIDDMAY
HHHCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCEEEEECCHHH
VEGAEYIPWEPENAKEKAREIIKKAIEAFKERKGMQKDYYDEKVKSVVGVGEESLVEFLG
HCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHC
GSVKPLIELIASGKIKGVVGVVGCSNLASGGHDNIIVTLTKELIKRDILVLAGGCVNSPL
CCHHHHHHHHHCCCCCEEEEEEECHHHCCCCCCCEEEEEHHHHHHHHHHEEECCCCCCCH
KHAGLFDPASAELAGENLKEVCKSLGIPPVLNFGACLSIARIEQVAVAIAEELGVDIPDL
HHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PVAASAPQWLEEQALADATYAVDMGFTVHVSPVPFVTGSELVTKVLTEAVEGLTGGKLIP
CCCCCCHHHHHHHHHHHHHEEEECCCEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCC
EPNPYKAADLLEQTIMEKRKKLGI
CCCCCHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKNCIAAIPEVKEMVEKAKLKGIETPHTRFPNQFPKCPYGLKGVYCILCANGPCRITEKT
CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEECCCC
PYGVCGATADVIVARNLCRAVAAGTSCYVHCAENAARALLSAGKGEGSYEIRNEKKLKFL
CCCCCCCHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHCCCCCCCEEECCHHHHHHH
AKKLGFDANKDAKQLAVEVAEFILDDMYKPRWEKSELVPKLCPEKRLEVFEKLDILPGGA
HHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHCCHHCCCHHHHHHHHHHCCCCCCC
KGEIVDALTKTSTNLNSNPMDLLVHCLRLGLHAGFTGLLMTCWLNDILFGSPKITVVENG
CCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCEEEEECC
FSSVKPNNVNIMITGHQHALIQPLCEAAMEEDLIKMAKEAGADEIKIIGATCNGQDMETR
CCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHH
IAHLPESFVGYIANNFTTEPLVATGLIDAVVSEFNCTFHGLKFVAEKTKTKLICIDDMAY
HHHCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCEEEEECCHHH
VEGAEYIPWEPENAKEKAREIIKKAIEAFKERKGMQKDYYDEKVKSVVGVGEESLVEFLG
HCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHC
GSVKPLIELIASGKIKGVVGVVGCSNLASGGHDNIIVTLTKELIKRDILVLAGGCVNSPL
CCHHHHHHHHHCCCCCEEEEEEECHHHCCCCCCCEEEEEHHHHHHHHHHEEECCCCCCCH
KHAGLFDPASAELAGENLKEVCKSLGIPPVLNFGACLSIARIEQVAVAIAEELGVDIPDL
HHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PVAASAPQWLEEQALADATYAVDMGFTVHVSPVPFVTGSELVTKVLTEAVEGLTGGKLIP
CCCCCCHHHHHHHHHHHHHEEEECCCEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCC
EPNPYKAADLLEQTIMEKRKKLGI
CCCCCHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087; 11841199