Click here to switch to the map view.

The map label for this gene is ptr2 [H]

Identifier: 15668904

GI number: 15668904

Start: 656703

End: 657173

Strand: Direct

Name: ptr2 [H]

Synonym: MJ0723

Alternate gene names: 15668904

Gene position: 656703-657173 (Clockwise)

Preceding gene: 15668902

Following gene: 15668910

Centisome position: 39.44

GC content: 32.06

Gene sequence:

>471_bases
TTGTTAGGTTATATTAATATTATTAATCATCCGAAATTCGGTGATATTATGGACGAAAAAGACCTAAAAATTATCGAAAT
TCTTATGAGAGATGGAAGAAAATCATACACAGATATAGCAAGGGAGTTAGGAACAAGTGAAAGCTCCATAAGAAAGAGGG
TCAAAAAATTGGAAGAGGAAGGAGTTATTAAGGGCTATACTGCAATAATAGATCCATCAAAGATTGGTTATAATGTCGTT
GCCTTAACAGGATTTGATACAGAGCCTGATAAATTTTTAAATGTTGCAAAGGAACTCTGTAAGTTTCCAGAAGTTAAGAA
GGTATTTACATCAACAGGAGACCACATGATTATGACAGAAATCTGGGCTAAAGATGGAAAAGAGTTCTCTGACTTAATAT
TTAACAAAATTGGAAAGATTGAAGGAATAAAAAAGATTTGCCCAGCAATTATTTTAGAGCAAATGAAATAA

Upstream 100 bases:

>100_bases
TGCAAAATGATTAAAATTAAATATGAAAATTGAACGCCTTCTTATAGAAGGCGTTCATTATAATTCCTTTTTATACCTTA
TATTTTGCAATGAACTATAA

Downstream 100 bases:

>100_bases
ACTTATTGTTTTTATTTTAAAACTTTTCCTGTCCTTAAATACCAGATATACAAATCCAATTCAGAGAGTTTTAAATTAAC
CTCTTCTCCAATGTCTCTCA

Product: AsnC family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 156; Mature: 156

Protein sequence:

>156_residues
MLGYINIINHPKFGDIMDEKDLKIIEILMRDGRKSYTDIARELGTSESSIRKRVKKLEEEGVIKGYTAIIDPSKIGYNVV
ALTGFDTEPDKFLNVAKELCKFPEVKKVFTSTGDHMIMTEIWAKDGKEFSDLIFNKIGKIEGIKKICPAIILEQMK

Sequences:

>Translated_156_residues
MLGYINIINHPKFGDIMDEKDLKIIEILMRDGRKSYTDIARELGTSESSIRKRVKKLEEEGVIKGYTAIIDPSKIGYNVV
ALTGFDTEPDKFLNVAKELCKFPEVKKVFTSTGDHMIMTEIWAKDGKEFSDLIFNKIGKIEGIKKICPAIILEQMK
>Mature_156_residues
MLGYINIINHPKFGDIMDEKDLKIIEILMRDGRKSYTDIARELGTSESSIRKRVKKLEEEGVIKGYTAIIDPSKIGYNVV
ALTGFDTEPDKFLNVAKELCKFPEVKKVFTSTGDHMIMTEIWAKDGKEFSDLIFNKIGKIEGIKKICPAIILEQMK

Specific function: Participates in positive as well as negative regulation of transcription. Binds to its own promoter [H]

COG id: COG1522

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH asnC-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1790182, Length=139, Percent_Identity=26.6187050359712, Blast_Score=68, Evalue=3e-13,
Organism=Escherichia coli, GI1787116, Length=146, Percent_Identity=24.6575342465753, Blast_Score=63, Evalue=9e-12,
Organism=Escherichia coli, GI87081742, Length=147, Percent_Identity=23.8095238095238, Blast_Score=62, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011008
- InterPro:   IPR013196
- InterPro:   IPR000485
- InterPro:   IPR019885
- InterPro:   IPR019888
- InterPro:   IPR019887
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01037 AsnC_trans_reg; PF08279 HTH_11 [H]

EC number: NA

Molecular weight: Translated: 17730; Mature: 17730

Theoretical pI: Translated: 8.19; Mature: 8.19

Prosite motif: PS00519 HTH_ASNC_1 ; PS50956 HTH_ASNC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLGYINIINHPKFGDIMDEKDLKIIEILMRDGRKSYTDIARELGTSESSIRKRVKKLEEE
CCCEEEECCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHC
GVIKGYTAIIDPSKIGYNVVALTGFDTEPDKFLNVAKELCKFPEVKKVFTSTGDHMIMTE
CCCCCHHEEECCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCHHHHHHHHCCCCCHHHHH
IWAKDGKEFSDLIFNKIGKIEGIKKICPAIILEQMK
HHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHCC
>Mature Secondary Structure
MLGYINIINHPKFGDIMDEKDLKIIEILMRDGRKSYTDIARELGTSESSIRKRVKKLEEE
CCCEEEECCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHC
GVIKGYTAIIDPSKIGYNVVALTGFDTEPDKFLNVAKELCKFPEVKKVFTSTGDHMIMTE
CCCCCHHEEECCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCHHHHHHHHCCCCCHHHHH
IWAKDGKEFSDLIFNKIGKIEGIKKICPAIILEQMK
HHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087; 11226165 [H]