| Definition | Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome. |
|---|---|
| Accession | NC_000909 |
| Length | 1,664,970 |
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The map label for this gene is 15668657
Identifier: 15668657
GI number: 15668657
Start: 422467
End: 423063
Strand: Direct
Name: 15668657
Synonym: MJ0480
Alternate gene names: NA
Gene position: 422467-423063 (Clockwise)
Preceding gene: 15668656
Following gene: 15668659
Centisome position: 25.37
GC content: 30.15
Gene sequence:
>597_bases ATGTTTGGTTCTATATTTGACATATATTATAAAACCTTGGATGCAATTTTCATGCCTATAATAAAAGTTCTACATCCCGC TTTAGCAATTTTAATTATTGCAATAATTGTCTCTTTAATCATAAATATAGCTACAAAACTTTTAGTTGACCAGAAGAGAG TTGCTGAACTAAAAAAGGAGATTCAGGAATTTCAGGTTAAATTTAAAAAAATGTCTAAAAATCCTGAAATGATGGAAAAA CTTCAAGAAGAACAACAGAGAATTATGCAACTCAACGCTGAATTAATGAAGATGAGTTTTAGGCCGATGATATATACATG GGTTCCAATAATTTTAATATTTATTTATTTGAGGCATGTTTATGGGTTTGGTGGAGTTTATCAAGAGTTAAATCCTGGTT GGAATGGAGTTGTTGTGTATCTACCTATAATATTGTCAAAGATTTTGTTTATTGATTTCTGGCACTGGCTTGGTTCAATA TTTTATAAAGGAGGATTTAAAATAGTTTCTAACACTGCCTTAGGTTGGTTAGGTTGGTATATTCTCTGTTCATTCGCAAC ATCTACTGTATTGAGAAAGATACTTGGAATAAAATAA
Upstream 100 bases:
>100_bases TTTTATTAGATAAAGCAGTTCAAGAACTTATTGAAGTTCTCAAATAATCCTTATATAATATTTTAAAATAATTTTTAAAT AACCACATTAAGGTGAGTTA
Downstream 100 bases:
>100_bases ATGATTAAGGTTCTTCTCTATTTTCAGTTTCTTCTTTATCTTTCTGTTTTTCCTCAACTTTTAAAAATTTATTTTTCTTC TTTTTCTCTAATTTTTCTCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 198; Mature: 198
Protein sequence:
>198_residues MFGSIFDIYYKTLDAIFMPIIKVLHPALAILIIAIIVSLIINIATKLLVDQKRVAELKKEIQEFQVKFKKMSKNPEMMEK LQEEQQRIMQLNAELMKMSFRPMIYTWVPIILIFIYLRHVYGFGGVYQELNPGWNGVVVYLPIILSKILFIDFWHWLGSI FYKGGFKIVSNTALGWLGWYILCSFATSTVLRKILGIK
Sequences:
>Translated_198_residues MFGSIFDIYYKTLDAIFMPIIKVLHPALAILIIAIIVSLIINIATKLLVDQKRVAELKKEIQEFQVKFKKMSKNPEMMEK LQEEQQRIMQLNAELMKMSFRPMIYTWVPIILIFIYLRHVYGFGGVYQELNPGWNGVVVYLPIILSKILFIDFWHWLGSI FYKGGFKIVSNTALGWLGWYILCSFATSTVLRKILGIK >Mature_198_residues MFGSIFDIYYKTLDAIFMPIIKVLHPALAILIIAIIVSLIINIATKLLVDQKRVAELKKEIQEFQVKFKKMSKNPEMMEK LQEEQQRIMQLNAELMKMSFRPMIYTWVPIILIFIYLRHVYGFGGVYQELNPGWNGVVVYLPIILSKILFIDFWHWLGSI FYKGGFKIVSNTALGWLGWYILCSFATSTVLRKILGIK
Specific function: Unknown
COG id: COG1422
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential)
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y480_METJA (Q57904)
Other databases:
- EMBL: L77117 - PIR: H64359 - RefSeq: NP_247456.1 - GeneID: 1451342 - GenomeReviews: L77117_GR - KEGG: mja:MJ_0480 - NMPDR: fig|243232.1.peg.493 - TIGR: MJ0480 - HOGENOM: HBG540959 - OMA: KMYHSAL - ProtClustDB: CLSK876199 - BioCyc: MJAN243232:MJ_0480-MONOMER - InterPro: IPR002809
Pfam domain/function: PF01956 DUF106
EC number: NA
Molecular weight: Translated: 23072; Mature: 23072
Theoretical pI: Translated: 10.07; Mature: 10.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0xca862f8)-; HASH(0xc51aed4)-; HASH(0xc9e4428)-; HASH(0xceb9298)-;
Cys/Met content:
0.5 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFGSIFDIYYKTLDAIFMPIIKVLHPALAILIIAIIVSLIINIATKLLVDQKRVAELKKE CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IQEFQVKFKKMSKNPEMMEKLQEEQQRIMQLNAELMKMSFRPMIYTWVPIILIFIYLRHV HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH YGFGGVYQELNPGWNGVVVYLPIILSKILFIDFWHWLGSIFYKGGFKIVSNTALGWLGWY HHCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH ILCSFATSTVLRKILGIK HHHHHHHHHHHHHHHCCH >Mature Secondary Structure MFGSIFDIYYKTLDAIFMPIIKVLHPALAILIIAIIVSLIINIATKLLVDQKRVAELKKE CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IQEFQVKFKKMSKNPEMMEKLQEEQQRIMQLNAELMKMSFRPMIYTWVPIILIFIYLRHV HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH YGFGGVYQELNPGWNGVVVYLPIILSKILFIDFWHWLGSIFYKGGFKIVSNTALGWLGWY HHCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH ILCSFATSTVLRKILGIK HHHHHHHHHHHHHHHCCH
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8688087