| Definition | Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome. |
|---|---|
| Accession | NC_000909 |
| Length | 1,664,970 |
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The map label for this gene is 15668601
Identifier: 15668601
GI number: 15668601
Start: 382290
End: 382712
Strand: Direct
Name: 15668601
Synonym: MJ0425
Alternate gene names: NA
Gene position: 382290-382712 (Clockwise)
Preceding gene: 15668600
Following gene: 15668605
Centisome position: 22.96
GC content: 30.97
Gene sequence:
>423_bases GTGGTTCAAGTTGTGTATCCAAACATGGCAGATTTAGAGATTGGTAATGTGAAGGAGGTTTATAACAAAATCTTAGCATC TCTAAATGAATACTATGGTAAAATGTTTGAAAACCTTGTATTTGAGATGCTTAAACTTAAAATTATTGATTTTGGTCAAA AAAGTGTGGCTAAGTGGTGGCATAAGGGAGAAGAGATTGATGTTTTAGCTTATAACAATAATAAGATGATTGCCTTTGAA GTAAAATGGAAGGATTTGAGCTTTAAAGAAGCAAAAGGGATTTTAAGGGATTTGGAAAGAAAACTTGATAAAGTTGATTT TGATGGAGAAAAAGAGTGCTACATCATAGCAAAGAGTATTGAAGGAAAAGAAAAACTAAAAGCACTTGATTTAATGGATT TGGAGAAATTAATTATCTTCTAG
Upstream 100 bases:
>100_bases GAATTTCAATACCTAATGCAATTAAATAGAGGAGTTTTAAGCATATTTCAAAAGATTTGGGATGGGATTTTGGCAGATAC GAAGGTTTTTTTAATAATCT
Downstream 100 bases:
>100_bases ACATCTTTTATGCTCTTCAATATCGAAATCTATTTCGTAATATTTATAGATTTCATCTGCAAGGTTTTCAGCAAATTCTT TAGCTTTCTCTTTACTTTCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 140; Mature: 140
Protein sequence:
>140_residues MVQVVYPNMADLEIGNVKEVYNKILASLNEYYGKMFENLVFEMLKLKIIDFGQKSVAKWWHKGEEIDVLAYNNNKMIAFE VKWKDLSFKEAKGILRDLERKLDKVDFDGEKECYIIAKSIEGKEKLKALDLMDLEKLIIF
Sequences:
>Translated_140_residues MVQVVYPNMADLEIGNVKEVYNKILASLNEYYGKMFENLVFEMLKLKIIDFGQKSVAKWWHKGEEIDVLAYNNNKMIAFE VKWKDLSFKEAKGILRDLERKLDKVDFDGEKECYIIAKSIEGKEKLKALDLMDLEKLIIF >Mature_140_residues MVQVVYPNMADLEIGNVKEVYNKILASLNEYYGKMFENLVFEMLKLKIIDFGQKSVAKWWHKGEEIDVLAYNNNKMIAFE VKWKDLSFKEAKGILRDLERKLDKVDFDGEKECYIIAKSIEGKEKLKALDLMDLEKLIIF
Specific function: Unknown
COG id: COG1672
COG function: function code R; Predicted ATPase (AAA+ superfamily)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y425_METJA (Q57868)
Other databases:
- EMBL: L77117 - PIR: A64353 - RefSeq: NP_247399.1 - GeneID: 1451285 - GenomeReviews: L77117_GR - KEGG: mja:MJ_0425 - NMPDR: fig|243232.1.peg.436 - TIGR: MJ0425 - HOGENOM: HBG616979 - OMA: STRRFRS - BioCyc: MJAN243232:MJ_0425-MONOMER - InterPro: IPR004256 - InterPro: IPR011335
Pfam domain/function: PF03008 DUF234; SSF52980 Restrict_endonuc_II-like_core
EC number: NA
Molecular weight: Translated: 16448; Mature: 16448
Theoretical pI: Translated: 5.39; Mature: 5.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVQVVYPNMADLEIGNVKEVYNKILASLNEYYGKMFENLVFEMLKLKIIDFGQKSVAKWW CEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH HKGEEIDVLAYNNNKMIAFEVKWKDLSFKEAKGILRDLERKLDKVDFDGEKECYIIAKSI HCCCCEEEEEECCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECC EGKEKLKALDLMDLEKLIIF CCHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MVQVVYPNMADLEIGNVKEVYNKILASLNEYYGKMFENLVFEMLKLKIIDFGQKSVAKWW CEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH HKGEEIDVLAYNNNKMIAFEVKWKDLSFKEAKGILRDLERKLDKVDFDGEKECYIIAKSI HCCCCEEEEEECCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECC EGKEKLKALDLMDLEKLIIF CCHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087