| Definition | Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome. |
|---|---|
| Accession | NC_000909 |
| Length | 1,664,970 |
Click here to switch to the map view.
The map label for this gene is 15668523
Identifier: 15668523
GI number: 15668523
Start: 319063
End: 319614
Strand: Direct
Name: 15668523
Synonym: MJ0347.1
Alternate gene names: NA
Gene position: 319063-319614 (Clockwise)
Preceding gene: 15668522
Following gene: 15668524
Centisome position: 19.16
GC content: 29.17
Gene sequence:
>552_bases ATGAAAACAATTGTCATAGATAAATCAATGTCCGTAGATATAGAGTATTCAATTAATGCCATTGACCAGTGTAATATAAC TTCATTGAAAGATTTACAAATCCAACCTTTTGACCAATGTATTATACTTTGGAATGATAAAATAATTTTCAGAGGATATT GCATTGATGCAAGATTATCACAGAGTTTTGGACAGCAACAGTATGAATATACTATTAACAGCCCCCTCTGGATTCTAAGC CAGCAAAAAACTACGGCAAAAACTACATTTTTACAGATTTTCTTAAAAGAGTGTTGCAATTTATGTAATTTGGAACTGGA TTATCAATTAGATTCAAATCCACTGATTTACATTGAAGAAAGTAGTTATTTTGATGCATTAAAAAAGTGCATACTTTATA CAAAAAACTACAATACAAGATTTTACGTTGATTATGAATACAATTCATTAATTTTTACAGATAAAATTTCAGGACAACAT CCAAAAGAAGAGAAAGTTGTCGGTTATGAATTTGAATGGGATACTGAGATTATAAACCAAGTAAGGTGGTAA
Upstream 100 bases:
>100_bases CTAAAGGGTGTGTTGTTTGTATTACAGATATCAGTGGTGCAAGTGGAGATGTAGGATTTTTCTGGTTTGCAATAGGATAT TAAAGTATATGGTGTAAAGT
Downstream 100 bases:
>100_bases TAATGCCCTTTGTTCATTACATTGATGAAGAAAATTTCGATGATAAATTAAAAGAATGGACACTTGGTTTGAACAGTGAT TATGTGAATCCTTATGATTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 183; Mature: 183
Protein sequence:
>183_residues MKTIVIDKSMSVDIEYSINAIDQCNITSLKDLQIQPFDQCIILWNDKIIFRGYCIDARLSQSFGQQQYEYTINSPLWILS QQKTTAKTTFLQIFLKECCNLCNLELDYQLDSNPLIYIEESSYFDALKKCILYTKNYNTRFYVDYEYNSLIFTDKISGQH PKEEKVVGYEFEWDTEIINQVRW
Sequences:
>Translated_183_residues MKTIVIDKSMSVDIEYSINAIDQCNITSLKDLQIQPFDQCIILWNDKIIFRGYCIDARLSQSFGQQQYEYTINSPLWILS QQKTTAKTTFLQIFLKECCNLCNLELDYQLDSNPLIYIEESSYFDALKKCILYTKNYNTRFYVDYEYNSLIFTDKISGQH PKEEKVVGYEFEWDTEIINQVRW >Mature_183_residues MKTIVIDKSMSVDIEYSINAIDQCNITSLKDLQIQPFDQCIILWNDKIIFRGYCIDARLSQSFGQQQYEYTINSPLWILS QQKTTAKTTFLQIFLKECCNLCNLELDYQLDSNPLIYIEESSYFDALKKCILYTKNYNTRFYVDYEYNSLIFTDKISGQH PKEEKVVGYEFEWDTEIINQVRW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y34A_METJA (P81307)
Other databases:
- EMBL: L77117 - RefSeq: NP_247321.1 - GeneID: 1451204 - GenomeReviews: L77117_GR - KEGG: mja:MJ_0347.1 - NMPDR: fig|243232.1.peg.358 - TIGR: MJ0347.1 - OMA: IEYSINA - ProtClustDB: CLSK2517590 - BioCyc: MJAN243232:MJ_0347.1-MONOMER
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21756; Mature: 21756
Theoretical pI: Translated: 4.42; Mature: 4.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.8 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 3.8 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTIVIDKSMSVDIEYSINAIDQCNITSLKDLQIQPFDQCIILWNDKIIFRGYCIDARLS CCEEEEECCCEEEEEEEECCCCCCCCCEEECCCCCCCCEEEEEECCCEEEEEEEECCHHH QSFGQQQYEYTINSPLWILSQQKTTAKTTFLQIFLKECCNLCNLELDYQLDSNPLIYIEE HHCCCCEEEEEECCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCEEEEEECCCCEEEEEC SSYFDALKKCILYTKNYNTRFYVDYEYNSLIFTDKISGQHPKEEKVVGYEFEWDTEIINQ CCHHHHHHHHEEEECCCCEEEEEEEECCEEEEEECCCCCCCCCCCEEEEEEECCHHHHHH VRW CCC >Mature Secondary Structure MKTIVIDKSMSVDIEYSINAIDQCNITSLKDLQIQPFDQCIILWNDKIIFRGYCIDARLS CCEEEEECCCEEEEEEEECCCCCCCCCEEECCCCCCCCEEEEEECCCEEEEEEEECCHHH QSFGQQQYEYTINSPLWILSQQKTTAKTTFLQIFLKECCNLCNLELDYQLDSNPLIYIEE HHCCCCEEEEEECCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCEEEEEECCCCEEEEEC SSYFDALKKCILYTKNYNTRFYVDYEYNSLIFTDKISGQHPKEEKVVGYEFEWDTEIINQ CCHHHHHHHHEEEECCCCEEEEEEEECCEEEEEECCCCCCCCCCCEEEEEEECCHHHHHH VRW CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087