| Definition | Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome. |
|---|---|
| Accession | NC_000909 |
| Length | 1,664,970 |
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The map label for this gene is yfdL [C]
Identifier: 15668522
GI number: 15668522
Start: 318590
End: 319045
Strand: Direct
Name: yfdL [C]
Synonym: MJ0347
Alternate gene names: 15668522
Gene position: 318590-319045 (Clockwise)
Preceding gene: 15668521
Following gene: 15668523
Centisome position: 19.13
GC content: 32.46
Gene sequence:
>456_bases ATGGGATTTGACCCAGTAACTTTTGCAAAAATAAAGAAAATTTCAATAGATTCAAATGCAGATGGATACATCGACTACGC AAATCAGGCAGGAAATGCTGATAAGTTAGACGGAAAAGATGCATCAGATTTTTTATCAATTGATTCATTTAAAGATTTAA AAGAAGATAATGGATACATAAAATTTCCAACGGGGCTTATTATGCAGTGGGGGAAGGTTTATGTCAATAATACCACATCA TATCAAGAAATTCCTGTAAATTTTACCATTGAATTCCCGAACAAATGTCTAAACGTATTTGCATCAATATATGAGGGTTC TGGAGTTGATAATGACTATATCAAATGTATAACAAGAATTGCAAACATTACAACTAAAGGGTGTGTTGTTTGTATTACAG ATATCAGTGGTGCAAGTGGAGATGTAGGATTTTTCTGGTTTGCAATAGGATATTAA
Upstream 100 bases:
>100_bases CAAAAAACAGAATTAATACCCATTAAGCACCCATATATGAAAATATCATTTGATTCTGCTGTTTCAGGGTGGGTGTCATA TATAAAATAAAGGTGATACT
Downstream 100 bases:
>100_bases AGTATATGGTGTAAAGTATGAAAACAATTGTCATAGATAAATCAATGTCCGTAGATATAGAGTATTCAATTAATGCCATT GACCAGTGTAATATAACTTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 151; Mature: 150
Protein sequence:
>151_residues MGFDPVTFAKIKKISIDSNADGYIDYANQAGNADKLDGKDASDFLSIDSFKDLKEDNGYIKFPTGLIMQWGKVYVNNTTS YQEIPVNFTIEFPNKCLNVFASIYEGSGVDNDYIKCITRIANITTKGCVVCITDISGASGDVGFFWFAIGY
Sequences:
>Translated_151_residues MGFDPVTFAKIKKISIDSNADGYIDYANQAGNADKLDGKDASDFLSIDSFKDLKEDNGYIKFPTGLIMQWGKVYVNNTTS YQEIPVNFTIEFPNKCLNVFASIYEGSGVDNDYIKCITRIANITTKGCVVCITDISGASGDVGFFWFAIGY >Mature_150_residues GFDPVTFAKIKKISIDSNADGYIDYANQAGNADKLDGKDASDFLSIDSFKDLKEDNGYIKFPTGLIMQWGKVYVNNTTSY QEIPVNFTIEFPNKCLNVFASIYEGSGVDNDYIKCITRIANITTKGCVVCITDISGASGDVGFFWFAIGY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y347_METJA (Q57793)
Other databases:
- EMBL: L77117 - PIR: C64343 - RefSeq: NP_247320.1 - ProteinModelPortal: Q57793 - GeneID: 1451203 - GenomeReviews: L77117_GR - KEGG: mja:MJ_0347 - NMPDR: fig|243232.1.peg.357 - TIGR: MJ0347 - BioCyc: MJAN243232:MJ_0347-MONOMER
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16627; Mature: 16496
Theoretical pI: Translated: 4.30; Mature: 4.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGFDPVTFAKIKKISIDSNADGYIDYANQAGNADKLDGKDASDFLSIDSFKDLKEDNGYI CCCCCCCCEEEEEEEECCCCCCEEEECCCCCCCCCCCCCCCHHHEECCCHHHHHCCCCEE KFPTGLIMQWGKVYVNNTTSYQEIPVNFTIEFPNKCLNVFASIYEGSGVDNDYIKCITRI EECHHHHEECCEEEECCCCCCEECCEEEEEECCHHHHHHHHHHHCCCCCCHHHHHHHHHH ANITTKGCVVCITDISGASGDVGFFWFAIGY HHCCCCCEEEEEEECCCCCCCCEEEEEEECC >Mature Secondary Structure GFDPVTFAKIKKISIDSNADGYIDYANQAGNADKLDGKDASDFLSIDSFKDLKEDNGYI CCCCCCCEEEEEEEECCCCCCEEEECCCCCCCCCCCCCCCHHHEECCCHHHHHCCCCEE KFPTGLIMQWGKVYVNNTTSYQEIPVNFTIEFPNKCLNVFASIYEGSGVDNDYIKCITRI EECHHHHEECCEEEECCCCCCEECCEEEEEECCHHHHHHHHHHHCCCCCCHHHHHHHHHH ANITTKGCVVCITDISGASGDVGFFWFAIGY HHCCCCCEEEEEEECCCCCCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087