| Definition | Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome. |
|---|---|
| Accession | NC_000909 |
| Length | 1,664,970 |
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The map label for this gene is 15668483
Identifier: 15668483
GI number: 15668483
Start: 288380
End: 289081
Strand: Reverse
Name: 15668483
Synonym: MJ0308
Alternate gene names: NA
Gene position: 289081-288380 (Counterclockwise)
Preceding gene: 15668484
Following gene: 15668482
Centisome position: 17.36
GC content: 35.9
Gene sequence:
>702_bases ATGGATGTTAATGAAATAAGAGAAAATGCAAAAAAGTTAATGGAATTGATGATGTTAGATAAACCATTTGTCGCTGTAAA ATTGGCAAAATCAAAGGAAGAAATTCCAGAAGGCTATGAAACATTAGACGAAGAAAAAAGACACTGTGAAATGATTCAAA TGGCAAGATTAGAAAGAAAAAAATTATATGCAACAGTTGATAAACACCTCTGTAAGGGAGGAGCTTATGCAATGGGGGTC TTTAGAAACCCACCAGAACCATTAGCAACAGGAAAATTATATGTCAAATTAGGAAACTTTAAAGATGAAGAGGCAGCTAA AAAAACAGTTGATGCAATACCAAAAGTTGAAGAGGAAATTTATGCAACAGTCTATGCTCCATTAGATGAAACCGACTTCA TTCCAGACTCAATTGTATTTATTGGAGAGCCATTATATGCGTTGAGGTTAGTTCAAGCAATACTCTACCATAAAGGTGGA AGATTCCAGGCAGATTTCTCAGGAATTCAGTCATTGTGTGCTGATGCTGTAGCGGCAGTTTATACAAGAAAAGCTCCTAA CATGACTTTAGGTTGTAACGGTTCAAGAAAATACGCTGGAATTAAGCCAGAAGAAGTTGTTGTAGCTTTCCCACCAGAGA AATTGAAGGATATTGTTGAAGCAATTGAACACTTCAGACAAGTTTGGACATGTGGTCATTAA
Upstream 100 bases:
>100_bases TTAAATTTTTTGTGATTTGGAATTAAATCGAAAAGTATATATACTGGGGAAGTTAATAATATAGTTCGTAAAACATACAC AACCATTCACAGGTGAGATT
Downstream 100 bases:
>100_bases TTTTTAGCCTATAATTTAATATTCTATTTTTGGAAAACTATTTATAAAAATTTGGATAAAATTTTTATTATAAACTTAAG AGGTTTTTAAGGTGTTAGTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 233; Mature: 233
Protein sequence:
>233_residues MDVNEIRENAKKLMELMMLDKPFVAVKLAKSKEEIPEGYETLDEEKRHCEMIQMARLERKKLYATVDKHLCKGGAYAMGV FRNPPEPLATGKLYVKLGNFKDEEAAKKTVDAIPKVEEEIYATVYAPLDETDFIPDSIVFIGEPLYALRLVQAILYHKGG RFQADFSGIQSLCADAVAAVYTRKAPNMTLGCNGSRKYAGIKPEEVVVAFPPEKLKDIVEAIEHFRQVWTCGH
Sequences:
>Translated_233_residues MDVNEIRENAKKLMELMMLDKPFVAVKLAKSKEEIPEGYETLDEEKRHCEMIQMARLERKKLYATVDKHLCKGGAYAMGV FRNPPEPLATGKLYVKLGNFKDEEAAKKTVDAIPKVEEEIYATVYAPLDETDFIPDSIVFIGEPLYALRLVQAILYHKGG RFQADFSGIQSLCADAVAAVYTRKAPNMTLGCNGSRKYAGIKPEEVVVAFPPEKLKDIVEAIEHFRQVWTCGH >Mature_233_residues MDVNEIRENAKKLMELMMLDKPFVAVKLAKSKEEIPEGYETLDEEKRHCEMIQMARLERKKLYATVDKHLCKGGAYAMGV FRNPPEPLATGKLYVKLGNFKDEEAAKKTVDAIPKVEEEIYATVYAPLDETDFIPDSIVFIGEPLYALRLVQAILYHKGG RFQADFSGIQSLCADAVAAVYTRKAPNMTLGCNGSRKYAGIKPEEVVVAFPPEKLKDIVEAIEHFRQVWTCGH
Specific function: Unknown
COG id: COG2043
COG function: function code S; Uncharacterized protein conserved in archaea
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y308_METJA (Q57756)
Other databases:
- EMBL: L77117 - PIR: E64338 - RefSeq: NP_247281.1 - GeneID: 1451163 - GenomeReviews: L77117_GR - KEGG: mja:MJ_0308 - NMPDR: fig|243232.1.peg.318 - TIGR: MJ0308 - HOGENOM: HBG733852 - OMA: ITFINHS - ProtClustDB: CLSK876152 - BioCyc: MJAN243232:MJ_0308-MONOMER - InterPro: IPR003748
Pfam domain/function: PF02596 DUF169
EC number: NA
Molecular weight: Translated: 26245; Mature: 26245
Theoretical pI: Translated: 6.37; Mature: 6.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDVNEIRENAKKLMELMMLDKPFVAVKLAKSKEEIPEGYETLDEEKRHCEMIQMARLERK CCHHHHHHHHHHHHHHHHHCCCHHEEEEHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH KLYATVDKHLCKGGAYAMGVFRNPPEPLATGKLYVKLGNFKDEEAAKKTVDAIPKVEEEI HHHHHHHHHHHCCCCEEEECCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHH YATVYAPLDETDFIPDSIVFIGEPLYALRLVQAILYHKGGRFQADFSGIQSLCADAVAAV HHHHCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH YTRKAPNMTLGCNGSRKYAGIKPEEVVVAFPPEKLKDIVEAIEHFRQVWTCGH HHCCCCCEEECCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MDVNEIRENAKKLMELMMLDKPFVAVKLAKSKEEIPEGYETLDEEKRHCEMIQMARLERK CCHHHHHHHHHHHHHHHHHCCCHHEEEEHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH KLYATVDKHLCKGGAYAMGVFRNPPEPLATGKLYVKLGNFKDEEAAKKTVDAIPKVEEEI HHHHHHHHHHHCCCCEEEECCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHH YATVYAPLDETDFIPDSIVFIGEPLYALRLVQAILYHKGGRFQADFSGIQSLCADAVAAV HHHHCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH YTRKAPNMTLGCNGSRKYAGIKPEEVVVAFPPEKLKDIVEAIEHFRQVWTCGH HHCCCCCEEECCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087