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The map label for this gene is amzA

Identifier: 15668456

GI number: 15668456

Start: 266755

End: 267294

Strand: Reverse

Name: amzA

Synonym: MJ0281

Alternate gene names: 15668456

Gene position: 267294-266755 (Counterclockwise)

Preceding gene: 15668459

Following gene: 15668453

Centisome position: 16.05

GC content: 30.0

Gene sequence:

>540_bases
TTGGTGATGATTATGAGAATTTGTATCCAACCAGTTGGAGATGTTAATGATGAGATTTTAAAATTTTTAAAGAAAAAATT
TGGGGAAGTTTTTGGAATGTGTGAAATACTTCCTAAAATTGATATTCCAATTTATGCTTATAATTTTAGTAGAGGGCAAT
TTAATTCAACCTTAATTTTAAAATCTCTACCAACAGTTGAAGATATCGTTTTAGGTGTTACCGAGGTAGATATATACGCA
GACAATTTAAATTTTGTGTTTGGAGAGGCAGAGTTATTTGGAAAAAGAGCTTTGATATCACTGGCAAGATTAAGACCTGA
ATTTTATGGGTTGCCACCAAATAAAGATGTCTTAAAAATTAGGGCTTTAAAAGAGGCGATACATGAAATAGGCCATGTTT
TGGGATTAATACATTGCGAAAATAAGAGATGTGTTATGAGTTTTTCAAATTCTATTATCGATGTGGATTTAAAGGATTGG
AGATATTGCAAAAAATGCTTAAAAAAGCTACAGGATAGAGGAATTTATATTTCAATTTAA

Upstream 100 bases:

>100_bases
CTCCTCTGTTAGCTTTACCACACTATCACCAAAATAAATTTTATGAAACATTTTCATTTAAATTTATAATGTTGTCCTAT
ACATAATTAACTATTTTTTA

Downstream 100 bases:

>100_bases
TTTTCTTCTTTTTCTTCTTCTAATTTTAATATTGCTTCAGCAATGTCTCCATTACACTCCTCTAATGCCTTTCTTGCTTC
TTCCTTTGAAACGTTGCACT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 179; Mature: 179

Protein sequence:

>179_residues
MVMIMRICIQPVGDVNDEILKFLKKKFGEVFGMCEILPKIDIPIYAYNFSRGQFNSTLILKSLPTVEDIVLGVTEVDIYA
DNLNFVFGEAELFGKRALISLARLRPEFYGLPPNKDVLKIRALKEAIHEIGHVLGLIHCENKRCVMSFSNSIIDVDLKDW
RYCKKCLKKLQDRGIYISI

Sequences:

>Translated_179_residues
MVMIMRICIQPVGDVNDEILKFLKKKFGEVFGMCEILPKIDIPIYAYNFSRGQFNSTLILKSLPTVEDIVLGVTEVDIYA
DNLNFVFGEAELFGKRALISLARLRPEFYGLPPNKDVLKIRALKEAIHEIGHVLGLIHCENKRCVMSFSNSIIDVDLKDW
RYCKKCLKKLQDRGIYISI
>Mature_179_residues
MVMIMRICIQPVGDVNDEILKFLKKKFGEVFGMCEILPKIDIPIYAYNFSRGQFNSTLILKSLPTVEDIVLGVTEVDIYA
DNLNFVFGEAELFGKRALISLARLRPEFYGLPPNKDVLKIRALKEAIHEIGHVLGLIHCENKRCVMSFSNSIIDVDLKDW
RYCKKCLKKLQDRGIYISI

Specific function: Probable zinc metalloprotease

COG id: COG1913

COG function: function code R; Predicted Zn-dependent proteases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M54 family

Homologues:

Organism=Homo sapiens, GI75812974, Length=128, Percent_Identity=33.59375, Blast_Score=72, Evalue=2e-13,
Organism=Homo sapiens, GI75812972, Length=128, Percent_Identity=33.59375, Blast_Score=72, Evalue=2e-13,
Organism=Homo sapiens, GI75812970, Length=128, Percent_Identity=33.59375, Blast_Score=72, Evalue=2e-13,
Organism=Homo sapiens, GI75812968, Length=128, Percent_Identity=33.59375, Blast_Score=72, Evalue=2e-13,
Organism=Homo sapiens, GI75812966, Length=128, Percent_Identity=33.59375, Blast_Score=72, Evalue=2e-13,
Organism=Homo sapiens, GI75812976, Length=128, Percent_Identity=33.59375, Blast_Score=72, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): AMZA_METJA (Q57729)

Other databases:

- EMBL:   L77117
- PIR:   B64335
- RefSeq:   NP_247254.1
- ProteinModelPortal:   Q57729
- MEROPS:   M54.001
- GeneID:   1451136
- GenomeReviews:   L77117_GR
- KEGG:   mja:MJ_0281
- NMPDR:   fig|243232.1.peg.291
- TIGR:   MJ0281
- HOGENOM:   HBG508786
- OMA:   VFGEAEL
- ProtClustDB:   CLSK2749866
- BioCyc:   MJAN243232:MJ_0281-MONOMER
- HAMAP:   MF_01842
- InterPro:   IPR012962
- InterPro:   IPR012091
- PIRSF:   PIRSF005785

Pfam domain/function: PF07998 Peptidase_M54

EC number: NA

Molecular weight: Translated: 20515; Mature: 20515

Theoretical pI: Translated: 8.36; Mature: 8.36

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: ACT_SITE 129-129

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
3.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVMIMRICIQPVGDVNDEILKFLKKKFGEVFGMCEILPKIDIPIYAYNFSRGQFNSTLIL
CEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCEEEE
KSLPTVEDIVLGVTEVDIYADNLNFVFGEAELFGKRALISLARLRPEFYGLPPNKDVLKI
ECCCCHHHHHHHHEEEEEEECCCEEEEEHHHHHHHHHHHHHHHHCHHHCCCCCCCHHHHH
RALKEAIHEIGHVLGLIHCENKRCVMSFSNSIIDVDLKDWRYCKKCLKKLQDRGIYISI
HHHHHHHHHHHHHHHHEEECCCEEEEECCCCEEEEECHHHHHHHHHHHHHHHCCEEEEC
>Mature Secondary Structure
MVMIMRICIQPVGDVNDEILKFLKKKFGEVFGMCEILPKIDIPIYAYNFSRGQFNSTLIL
CEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCEEEE
KSLPTVEDIVLGVTEVDIYADNLNFVFGEAELFGKRALISLARLRPEFYGLPPNKDVLKI
ECCCCHHHHHHHHEEEEEEECCCEEEEEHHHHHHHHHHHHHHHHCHHHCCCCCCCHHHHH
RALKEAIHEIGHVLGLIHCENKRCVMSFSNSIIDVDLKDWRYCKKCLKKLQDRGIYISI
HHHHHHHHHHHHHHHHEEECCCEEEEECCCCEEEEECHHHHHHHHHHHHHHHCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087