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The map label for this gene is rpl44e

Identifier: 15668424

GI number: 15668424

Start: 235629

End: 235913

Strand: Direct

Name: rpl44e

Synonym: MJ0249

Alternate gene names: 15668424

Gene position: 235629-235913 (Clockwise)

Preceding gene: 15668423

Following gene: 15668425

Centisome position: 14.15

GC content: 38.6

Gene sequence:

>285_bases
ATGAAAATCCCGAAGAAAGTTAGAAGATACTGCCCATACTGTAAAAAACACACTATCCACATTGTAGAGAAGGCAAAAAA
AGGAAAACCAAGTGAATTGACTTGGGGTCAGAGGCAGTTCAGAAGAGTTACTGCTGGTTATGGAGGTTTCCCAAGACCAT
TACCAGACAGGTCAAAACCAGTTAAAAAGATTGACTTAAGATTTAAATGTACTGAATGTGGAAAGATGCACACAAAGGCA
AATGGATGCTTCAGGTCAGGAAGATTTGAGTTCGTTGAGAAATAA

Upstream 100 bases:

>100_bases
TTTATATATGACCTAAACAAAAATGATGTTCTCTCTTTAGACAGAAAGATATCTCATATTTTAGAAAAACACAGAATTAT
CTCAAGGATAGGTGAAAGTT

Downstream 100 bases:

>100_bases
ATTTTAAAAACCTTAATAAATTTATAAAACTCTTTTAAACACTTTAAACAAAATTGTAGAGAGGGAGATGATGGAGTTAA
TCCCACAGCCAAGGACAAAG

Product: 50S ribosomal protein L44e

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 94; Mature: 94

Protein sequence:

>94_residues
MKIPKKVRRYCPYCKKHTIHIVEKAKKGKPSELTWGQRQFRRVTAGYGGFPRPLPDRSKPVKKIDLRFKCTECGKMHTKA
NGCFRSGRFEFVEK

Sequences:

>Translated_94_residues
MKIPKKVRRYCPYCKKHTIHIVEKAKKGKPSELTWGQRQFRRVTAGYGGFPRPLPDRSKPVKKIDLRFKCTECGKMHTKA
NGCFRSGRFEFVEK
>Mature_94_residues
MKIPKKVRRYCPYCKKHTIHIVEKAKKGKPSELTWGQRQFRRVTAGYGGFPRPLPDRSKPVKKIDLRFKCTECGKMHTKA
NGCFRSGRFEFVEK

Specific function: Unknown

COG id: COG1631

COG function: function code J; Ribosomal protein L44E

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L44e family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RL44_METJA (P54027)

Other databases:

- EMBL:   L77117
- PIR:   B64331
- RefSeq:   NP_247220.1
- ProteinModelPortal:   P54027
- GeneID:   1451103
- GenomeReviews:   L77117_GR
- KEGG:   mja:MJ_0249
- NMPDR:   fig|243232.1.peg.257
- TIGR:   MJ0249
- HOGENOM:   HBG496807
- OMA:   ANGCFRS
- ProtClustDB:   PRK05767
- BioCyc:   MJAN243232:MJ_0249-MONOMER
- GO:   GO:0005840
- GO:   GO:0006412
- InterPro:   IPR000552
- InterPro:   IPR011332
- Gene3D:   G3DSA:3.10.450.80
- PANTHER:   PTHR10369
- ProDom:   PD002841

Pfam domain/function: PF00935 Ribosomal_L44; SSF57829 Ribosomal_zn-bd

EC number: NA

Molecular weight: Translated: 11029; Mature: 11029

Theoretical pI: Translated: 11.02; Mature: 11.02

Prosite motif: PS01172 RIBOSOMAL_L44E

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.3 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
7.4 %Cys+Met (Translated Protein)
5.3 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
7.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIPKKVRRYCPYCKKHTIHIVEKAKKGKPSELTWGQRQFRRVTAGYGGFPRPLPDRSKP
CCCCHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCC
VKKIDLRFKCTECGKMHTKANGCFRSGRFEFVEK
CEEECEEEEECCCCCCCCCCCCCCCCCCEEECCC
>Mature Secondary Structure
MKIPKKVRRYCPYCKKHTIHIVEKAKKGKPSELTWGQRQFRRVTAGYGGFPRPLPDRSKP
CCCCHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCC
VKKIDLRFKCTECGKMHTKANGCFRSGRFEFVEK
CEEECEEEEECCCCCCCCCCCCCCCCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087