Definition Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome.
Accession NC_000909
Length 1,664,970

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The map label for this gene is 15668423

Identifier: 15668423

GI number: 15668423

Start: 235067

End: 235651

Strand: Direct

Name: 15668423

Synonym: MJ0248

Alternate gene names: NA

Gene position: 235067-235651 (Clockwise)

Preceding gene: 15668422

Following gene: 15668424

Centisome position: 14.12

GC content: 26.5

Gene sequence:

>585_bases
TTGAGGGTTTTCATAATTATTATTTATTTCAGATGTTTTTCAAAAGACCACAAACCATATTTTGTGATAACCATGTATGA
ATCTCTAAAAAATTATTTTTTTGAAGAAATAAAAAATGATAAATTGTTAAAATTGCCTGATGACTTTTATGATGACATTA
GGGAATATATAAAAAATATTAAAGATGATATTGAACTTGAAAGGGTAAAATATTATTTCAAAGAGCTTAGAAAGTTGAGA
ATATACAAAGCTCTGTATTTGGATAATGAGAGAGAAAACTTACTTCCAGAAGAGTTAAATATTATACATGCCATTGAAAA
TATTGTTGTTGAATTGAAAATTGAGGAAACTCCTGAATTTAAAAAACCTACTGAGATTGATACACCAAAACCTATATATA
CAATAAACGATATTGATGTTGTAAAGGTTGATAAAAACTTTCCACCATTCACAGATGGTACTTTTATATATGACCTAAAC
AAAAATGATGTTCTCTCTTTAGACAGAAAGATATCTCATATTTTAGAAAAACACAGAATTATCTCAAGGATAGGTGAAAG
TTATGAAAATCCCGAAGAAAGTTAG

Upstream 100 bases:

>100_bases
GCCTCTAAAATTAGAATATTCAATTGCAGGGGTAAATTTAACCTTCCTATTGGCTCCAAGAATTGAAGGATAAAAACCAT
TCTGCAGCATTTACTATATT

Downstream 100 bases:

>100_bases
AAGATACTGCCCATACTGTAAAAAACACACTATCCACATTGTAGAGAAGGCAAAAAAAGGAAAACCAAGTGAATTGACTT
GGGGTCAGAGGCAGTTCAGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 194; Mature: 194

Protein sequence:

>194_residues
MRVFIIIIYFRCFSKDHKPYFVITMYESLKNYFFEEIKNDKLLKLPDDFYDDIREYIKNIKDDIELERVKYYFKELRKLR
IYKALYLDNERENLLPEELNIIHAIENIVVELKIEETPEFKKPTEIDTPKPIYTINDIDVVKVDKNFPPFTDGTFIYDLN
KNDVLSLDRKISHILEKHRIISRIGESYENPEES

Sequences:

>Translated_194_residues
MRVFIIIIYFRCFSKDHKPYFVITMYESLKNYFFEEIKNDKLLKLPDDFYDDIREYIKNIKDDIELERVKYYFKELRKLR
IYKALYLDNERENLLPEELNIIHAIENIVVELKIEETPEFKKPTEIDTPKPIYTINDIDVVKVDKNFPPFTDGTFIYDLN
KNDVLSLDRKISHILEKHRIISRIGESYENPEES
>Mature_194_residues
MRVFIIIIYFRCFSKDHKPYFVITMYESLKNYFFEEIKNDKLLKLPDDFYDDIREYIKNIKDDIELERVKYYFKELRKLR
IYKALYLDNERENLLPEELNIIHAIENIVVELKIEETPEFKKPTEIDTPKPIYTINDIDVVKVDKNFPPFTDGTFIYDLN
KNDVLSLDRKISHILEKHRIISRIGESYENPEES

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y248_METJA (Q57698)

Other databases:

- EMBL:   L77117
- PIR:   A64331
- RefSeq:   NP_247219.1
- ProteinModelPortal:   Q57698
- GeneID:   1451102
- GenomeReviews:   L77117_GR
- KEGG:   mja:MJ_0248
- NMPDR:   fig|243232.1.peg.256
- TIGR:   MJ0248
- HOGENOM:   HBG539028
- OMA:   HEDEKKD
- ProtClustDB:   CLSK2749858
- BioCyc:   MJAN243232:MJ_0248-MONOMER

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23542; Mature: 23542

Theoretical pI: Translated: 4.96; Mature: 4.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVFIIIIYFRCFSKDHKPYFVITMYESLKNYFFEEIKNDKLLKLPDDFYDDIREYIKNI
CEEEEEEEEHHHHCCCCCCEEEEEHHHHHHHHHHHHHCCCCEEECCHHHHHHHHHHHHHH
KDDIELERVKYYFKELRKLRIYKALYLDNERENLLPEELNIIHAIENIVVELKIEETPEF
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHHEEEEEECCCCCC
KKPTEIDTPKPIYTINDIDVVKVDKNFPPFTDGTFIYDLNKNDVLSLDRKISHILEKHRI
CCCCCCCCCCCEEEECCEEEEEECCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHH
ISRIGESYENPEES
HHHHHHHCCCCCCC
>Mature Secondary Structure
MRVFIIIIYFRCFSKDHKPYFVITMYESLKNYFFEEIKNDKLLKLPDDFYDDIREYIKNI
CEEEEEEEEHHHHCCCCCCEEEEEHHHHHHHHHHHHHCCCCEEECCHHHHHHHHHHHHHH
KDDIELERVKYYFKELRKLRIYKALYLDNERENLLPEELNIIHAIENIVVELKIEETPEF
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHHEEEEEECCCCCC
KKPTEIDTPKPIYTINDIDVVKVDKNFPPFTDGTFIYDLNKNDVLSLDRKISHILEKHRI
CCCCCCCCCCCEEEECCEEEEEECCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHH
ISRIGESYENPEES
HHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087