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The map label for this gene is rps17E [H]

Identifier: 15668420

GI number: 15668420

Start: 233459

End: 233650

Strand: Reverse

Name: rps17E [H]

Synonym: MJ0245

Alternate gene names: 15668420

Gene position: 233650-233459 (Counterclockwise)

Preceding gene: 15668421

Following gene: 15668419

Centisome position: 14.03

GC content: 28.65

Gene sequence:

>192_bases
ATGATGGGAAGGATTAGGCAGACATTAATTAAAAGAACAGCTATGGAATTAATTAAAAAGTATAGAGATTTATTTACAAC
TGACTTTGAAACAAATAAAAGAGTTTTAGAGGAAGTTGCTCAAATCTCAACAAAAAGATTAAGAAATAGAATTGCAGGAT
ATATAACTCACAAAATGAGACAGCTCCAATAA

Upstream 100 bases:

>100_bases
ATAAAGCTCTCCAAAAGCAATATCTTGAGGAAACACAAAATAAAAACAAAAAATAATTAAAAATTAATAGAAAAATAATA
AAAAAGGATAAGAAGGTGAG

Downstream 100 bases:

>100_bases
AGGTGAAGCTATGTTTAAGGGGGTCTATCCCGCCATCATTACTCCTTTTAAAAATAAAGAAGTTGATTTTGATGGATTAG
AGGAGAACATAAACTTTTTA

Product: 30S ribosomal protein S17e

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 63; Mature: 63

Protein sequence:

>63_residues
MMGRIRQTLIKRTAMELIKKYRDLFTTDFETNKRVLEEVAQISTKRLRNRIAGYITHKMRQLQ

Sequences:

>Translated_63_residues
MMGRIRQTLIKRTAMELIKKYRDLFTTDFETNKRVLEEVAQISTKRLRNRIAGYITHKMRQLQ
>Mature_63_residues
MMGRIRQTLIKRTAMELIKKYRDLFTTDFETNKRVLEEVAQISTKRLRNRIAGYITHKMRQLQ

Specific function: Unknown

COG id: COG1383

COG function: function code J; Ribosomal protein S17E

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein S17e family [H]

Homologues:

Organism=Homo sapiens, GI310123351, Length=62, Percent_Identity=51.6129032258064, Blast_Score=72, Evalue=1e-13,
Organism=Homo sapiens, GI310123353, Length=62, Percent_Identity=51.6129032258064, Blast_Score=71, Evalue=2e-13,
Organism=Homo sapiens, GI310123357, Length=62, Percent_Identity=51.6129032258064, Blast_Score=71, Evalue=2e-13,
Organism=Homo sapiens, GI4506693, Length=62, Percent_Identity=51.6129032258064, Blast_Score=71, Evalue=2e-13,
Organism=Homo sapiens, GI310123349, Length=62, Percent_Identity=51.6129032258064, Blast_Score=70, Evalue=3e-13,
Organism=Homo sapiens, GI310123355, Length=62, Percent_Identity=50, Blast_Score=70, Evalue=5e-13,
Organism=Caenorhabditis elegans, GI17508695, Length=62, Percent_Identity=51.6129032258064, Blast_Score=67, Evalue=2e-12,
Organism=Saccharomyces cerevisiae, GI6323617, Length=62, Percent_Identity=51.6129032258064, Blast_Score=72, Evalue=2e-14,
Organism=Saccharomyces cerevisiae, GI6320655, Length=62, Percent_Identity=51.6129032258064, Blast_Score=72, Evalue=2e-14,
Organism=Drosophila melanogaster, GI17647889, Length=61, Percent_Identity=55.7377049180328, Blast_Score=70, Evalue=4e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001210
- InterPro:   IPR018273 [H]

Pfam domain/function: PF00833 Ribosomal_S17e [H]

EC number: NA

Molecular weight: Translated: 7641; Mature: 7641

Theoretical pI: Translated: 11.57; Mature: 11.57

Prosite motif: PS00712 RIBOSOMAL_S17E

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
6.3 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
6.3 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMGRIRQTLIKRTAMELIKKYRDLFTTDFETNKRVLEEVAQISTKRLRNRIAGYITHKMR
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QLQ
HCC
>Mature Secondary Structure
MMGRIRQTLIKRTAMELIKKYRDLFTTDFETNKRVLEEVAQISTKRLRNRIAGYITHKMR
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QLQ
HCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]