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The map label for this gene is gatC

Identifier: 15668418

GI number: 15668418

Start: 232312

End: 232560

Strand: Reverse

Name: gatC

Synonym: MJ0243

Alternate gene names: NA

Gene position: 232560-232312 (Counterclockwise)

Preceding gene: 15668419

Following gene: 15668417

Centisome position: 13.97

GC content: 31.73

Gene sequence:

>249_bases
ATGGATGAAAAAACCATTGAAAAAATAAAAAAAGAGGCTGAAGAGATTATTAATAAATTTAGCGAGGTATTAGAGAAGTT
CAACTTAGAGATGGAAGAGAGTTACTATATTATAGACACCAGAAATGTTTTAAGAGAGGACGAAGCAGTTGAAAGTAATC
CAGAATTCAGAGAGAAATTCCTAAAAATTGCCCCTAAGGTAAATAAAGAGGGCTATGTTGTTGTAGAAAAAGGTAGCTGG
TTAAAATAA

Upstream 100 bases:

>100_bases
GTTAAGATTGCCATTATGTGAGATGAGTGAAGAGCATAAAAAGATTTTGGAAAATGTTTTAAAAGATCTTGGTTTAATTT
AACTTTTATGGTGAAGTTTA

Downstream 100 bases:

>100_bases
CAAAACCAAAAAGTTTAAGTAATGGTTTCATATTATTGTAGGTAAAAATTTAAAAAACAAGATAAGAGGGTGATACCATA
AAGAGGAGTTCAAGAAGATG

Product: aspartyl/glutamyl-tRNA amidotransferase subunit C

Products: NA

Alternate protein names: Glu-ADT subunit C

Number of amino acids: Translated: 82; Mature: 82

Protein sequence:

>82_residues
MDEKTIEKIKKEAEEIINKFSEVLEKFNLEMEESYYIIDTRNVLREDEAVESNPEFREKFLKIAPKVNKEGYVVVEKGSW
LK

Sequences:

>Translated_82_residues
MDEKTIEKIKKEAEEIINKFSEVLEKFNLEMEESYYIIDTRNVLREDEAVESNPEFREKFLKIAPKVNKEGYVVVEKGSW
LK
>Mature_82_residues
MDEKTIEKIKKEAEEIINKFSEVLEKFNLEMEESYYIIDTRNVLREDEAVESNPEFREKFLKIAPKVNKEGYVVVEKGSW
LK

Specific function: Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction take

COG id: COG0721

COG function: function code J; Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gatC family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): GATC_METJA (Q57694)

Other databases:

- EMBL:   L77117
- PIR:   D64330
- RefSeq:   NP_247214.1
- ProteinModelPortal:   Q57694
- GeneID:   1451097
- GenomeReviews:   L77117_GR
- KEGG:   mja:MJ_0243
- NMPDR:   fig|243232.1.peg.251
- TIGR:   MJ0243
- HOGENOM:   HBG541256
- OMA:   LEMEESY
- ProtClustDB:   PRK00034
- BioCyc:   MJAN243232:MJ_0243-MONOMER
- GO:   GO:0006412
- HAMAP:   MF_00122
- InterPro:   IPR010120
- InterPro:   IPR003837
- TIGRFAMs:   TIGR01827

Pfam domain/function: PF02686 Glu-tRNAGln

EC number: 6.3.5.-

Molecular weight: Translated: 9786; Mature: 9786

Theoretical pI: Translated: 4.56; Mature: 4.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDEKTIEKIKKEAEEIINKFSEVLEKFNLEMEESYYIIDTRNVLREDEAVESNPEFREKF
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECHHHHHCCCCCCCCHHHHHHH
LKIAPKVNKEGYVVVEKGSWLK
HHHCCCCCCCCEEEEECCCCCC
>Mature Secondary Structure
MDEKTIEKIKKEAEEIINKFSEVLEKFNLEMEESYYIIDTRNVLREDEAVESNPEFREKF
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECHHHHHCCCCCCCCHHHHHHH
LKIAPKVNKEGYVVVEKGSWLK
HHHCCCCCCCCEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087