Definition Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome.
Accession NC_000909
Length 1,664,970

Click here to switch to the map view.

The map label for this gene is 15668414

Identifier: 15668414

GI number: 15668414

Start: 230494

End: 230988

Strand: Direct

Name: 15668414

Synonym: MJ0239

Alternate gene names: NA

Gene position: 230494-230988 (Clockwise)

Preceding gene: 15668413

Following gene: 15668422

Centisome position: 13.84

GC content: 27.68

Gene sequence:

>495_bases
GTGAAAAATATGGATGTTTATGAAATACTATACCAATTTTGCTTAGAATATGAAGTATTGTTAGATGATGAAAAAATCCC
CCTATGGAAATTAAAAAAAGAAGATTTAGATAAGGTTGATTTAGATTTACCTTGGACTTCTATTAGAGATTTAGCCATCT
ATTTATATGAGCTAAAAAAGAAACAACAAAACTCTAAAGAACTTATTAAATGTGATATAGTGGAGATTTTAGTAGGAATT
GCTTTATTAAAGCCAGAGGAAGGAAGCAATTACATGGGACTTGTTACGGAAGATATGTGTCTAACATATTTAAGTGAGCT
TATAACTGCAAGAATCAACTGTATAGCAAGATACTACTATATGATGAAAAAGCCACAAAACACAAATATATTTGACGAAA
TAATATTAAAATTTCCTCAAAAAAAGGACATAAGAGCTTCTAACATAAACGATTTAAGGGAGTTAGTTGGAAAAATTAGA
AATTATTTTAAATAA

Upstream 100 bases:

>100_bases
CCCAGATTTGGGCTTAAAACTTATTAAAAATTTTGTTGAAAGTGAATATTAACTTCTTAAAATTAGTTAAAAATTTAAAA
ATTTCAAAAAGAAATCTTAA

Downstream 100 bases:

>100_bases
TCTAAAAACCCATTAAAAATACTGGAATTATTGATAACATCATAACTAAAGCTACAAATATCGCCAATATTTGCCTCTTA
CCTATTTTTGTTTTTTTCAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 164; Mature: 164

Protein sequence:

>164_residues
MKNMDVYEILYQFCLEYEVLLDDEKIPLWKLKKEDLDKVDLDLPWTSIRDLAIYLYELKKKQQNSKELIKCDIVEILVGI
ALLKPEEGSNYMGLVTEDMCLTYLSELITARINCIARYYYMMKKPQNTNIFDEIILKFPQKKDIRASNINDLRELVGKIR
NYFK

Sequences:

>Translated_164_residues
MKNMDVYEILYQFCLEYEVLLDDEKIPLWKLKKEDLDKVDLDLPWTSIRDLAIYLYELKKKQQNSKELIKCDIVEILVGI
ALLKPEEGSNYMGLVTEDMCLTYLSELITARINCIARYYYMMKKPQNTNIFDEIILKFPQKKDIRASNINDLRELVGKIR
NYFK
>Mature_164_residues
MKNMDVYEILYQFCLEYEVLLDDEKIPLWKLKKEDLDKVDLDLPWTSIRDLAIYLYELKKKQQNSKELIKCDIVEILVGI
ALLKPEEGSNYMGLVTEDMCLTYLSELITARINCIARYYYMMKKPQNTNIFDEIILKFPQKKDIRASNINDLRELVGKIR
NYFK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y239_METJA (Q57691)

Other databases:

- EMBL:   L77117
- PIR:   H64329
- RefSeq:   NP_247210.1
- GeneID:   1451093
- GenomeReviews:   L77117_GR
- KEGG:   mja:MJ_0239
- NMPDR:   fig|243232.1.peg.247
- TIGR:   MJ0239
- HOGENOM:   HBG539027
- OMA:   ITARINC
- ProtClustDB:   CLSK876124
- BioCyc:   MJAN243232:MJ_0239-MONOMER

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19548; Mature: 19548

Theoretical pI: Translated: 5.12; Mature: 5.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNMDVYEILYQFCLEYEVLLDDEKIPLWKLKKEDLDKVDLDLPWTSIRDLAIYLYELKK
CCCCHHHHHHHHHHHHHHHEECCCCCCCEECCHHCCCCCCCCCCHHHHHHHHHHHHHHHH
KQQNSKELIKCDIVEILVGIALLKPEEGSNYMGLVTEDMCLTYLSELITARINCIARYYY
HHCCHHHHHHHHHHHHHHHHHHCCCCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHH
MMKKPQNTNIFDEIILKFPQKKDIRASNINDLRELVGKIRNYFK
HHCCCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKNMDVYEILYQFCLEYEVLLDDEKIPLWKLKKEDLDKVDLDLPWTSIRDLAIYLYELKK
CCCCHHHHHHHHHHHHHHHEECCCCCCCEECCHHCCCCCCCCCCHHHHHHHHHHHHHHHH
KQQNSKELIKCDIVEILVGIALLKPEEGSNYMGLVTEDMCLTYLSELITARINCIARYYY
HHCCHHHHHHHHHHHHHHHHHHCCCCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHH
MMKKPQNTNIFDEIILKFPQKKDIRASNINDLRELVGKIRNYFK
HHCCCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087