| Definition | Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome. |
|---|---|
| Accession | NC_000909 |
| Length | 1,664,970 |
Click here to switch to the map view.
The map label for this gene is 15668331
Identifier: 15668331
GI number: 15668331
Start: 161424
End: 163052
Strand: Reverse
Name: 15668331
Synonym: MJ0159
Alternate gene names: NA
Gene position: 163052-161424 (Counterclockwise)
Preceding gene: 15668332
Following gene: 15668321
Centisome position: 9.79
GC content: 32.41
Gene sequence:
>1629_bases GTGATAATAATGGCAGACCTTGATAGGAAGTTAATAGAAATTTTAGATATTTTATCTAAATCAAAAGAGCCTGTAGGGGC TAAAATTATAGCTAAAGAACTTAATAAGAGGGGTTATAAAATTGGAGAGAGGGCTGTGAGATATCATTTAAAGTTATTGG ATGGGATGAAATTAACAAAAAAAGTTGGTTATGCTGGAAGGGTTATAACTGAGAGAGGTTTAGAGGAGTTGGAGAAAGCT AATATATCTTATAGACTGGGGAGTATTTACTCGAATATATTGGAAAAAACAATATCTGCCAACTATAGGTTTGGATATGT AGTTATCAACAGATGTCAGGTTTATGCAGACTTTAATGATGTGTTAAAAATAATAAAAAGTGTCTATGAGTCTGGTTTGG CTGTTGGGGATAGAGTTGGAATTATAGATAGGGAAAAATTCGTGGAAATAAATACCCTCTGCTCATTAAACTTTGATAAT ATCCTACTACAAAATGGCATTTTTCCACTCCATGTATGTGCTGGAGTTGTTAAATATGAGGATGGAAAACCAGTAGAATT TAAAGAAATTATAGATTACAAATCTACATCTATAGACCCATTGAGAGCATTTATTGAGAAGAAAGAAACAGATGTTATGG GTATTATAGAGAATGGGGAGGGTTATTTACCAGCAAACTTTAGATACTTTGGAGTTGAGTTTTTGGAGAGATTTGAGACT ATATTGGAGATAGATGAATTAAAATGTATTATTAGTTATGGGACAGAAAATGTTTTAGGATTAGATGTTGGAGATGATAA GGTGGGAGTCGCTTTAATTGGAGGTCTAACACCAATAGCTCCATTTGTTGAAAACAACTACTGCGTTGAAATTTGTCCAA TGTCATCAATTGTTAGATTAGAATCTCTCCATAAGCTTAAAAAGAATCCAAGGGATATAGTAACAAAGAAGGCAAATATA AGAATAAAAACCGCTTTATCAAAAATGTTCAATGCAATGGCAAAGGTAACCTATGATATAGATGAAGCTGATGGAGATGT TATAGTAAATACTGCATTTATCGATAAAAAATACCTTGATGAGGCATTTGATATACTAAAAGAGGCATATAAAAAAGGTT TAGGCATATCCGACAGATTTGGAATTGTTGAAGAAAATGATAGGATAAAAATTCAAACAATCTGTGCTGTAACCTTAGAT GGAATATTTTTAAGAAACTCAGTTCCTCTCATACCAAAATATGGGGGGATTTTGGAGATAACTGAAGATAAGGAGAGGTT TATTGATATAATTGGTTATGATGGTTCGTCATTAGACCCTCATGAAGTTTTCTTTAATTTTGTTGATTGTGAAAAAACAT TTTTGGCAGGATTTAGGGAAGTGCATAGAGTTGCAAGAGAGAAATTAGAAGAAGTTTTAAAGAAATTAAATTGGAATGGT ATTAAAGCTATAGGAGAGCCAAACAATGAACTTTATGGTATTGGCGTGAATAAAGACATGTGTGGAGTTGTAACAATGGG GGGAATAAATCCCTTAGTGTTATTGAAAGAGAATGAAATACCTATTGAGTTAAAGGCAATGCATGAAGTTGTTAGATTTT CAGATTTAAAGAGTTATAAGGAGATTTAA
Upstream 100 bases:
>100_bases ACAAGGGGAAGGGCAGATCCAAAGAGAGTCATTGAGTTATTGAAAGAGAGATTAGATAAATAAATTTTTATTATTCTTTT TTTTAATAATTATTTTTTAG
Downstream 100 bases:
>100_bases ACTCATATATCCTAAATACTCTCATTAAAGTGGGGCTGAACGAAGTGAAGCCCCGCTCGGGTATCCCAATAGGGGCTTCC CCTATGGATTTAAAGAGTTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 542; Mature: 542
Protein sequence:
>542_residues MIIMADLDRKLIEILDILSKSKEPVGAKIIAKELNKRGYKIGERAVRYHLKLLDGMKLTKKVGYAGRVITERGLEELEKA NISYRLGSIYSNILEKTISANYRFGYVVINRCQVYADFNDVLKIIKSVYESGLAVGDRVGIIDREKFVEINTLCSLNFDN ILLQNGIFPLHVCAGVVKYEDGKPVEFKEIIDYKSTSIDPLRAFIEKKETDVMGIIENGEGYLPANFRYFGVEFLERFET ILEIDELKCIISYGTENVLGLDVGDDKVGVALIGGLTPIAPFVENNYCVEICPMSSIVRLESLHKLKKNPRDIVTKKANI RIKTALSKMFNAMAKVTYDIDEADGDVIVNTAFIDKKYLDEAFDILKEAYKKGLGISDRFGIVEENDRIKIQTICAVTLD GIFLRNSVPLIPKYGGILEITEDKERFIDIIGYDGSSLDPHEVFFNFVDCEKTFLAGFREVHRVAREKLEEVLKKLNWNG IKAIGEPNNELYGIGVNKDMCGVVTMGGINPLVLLKENEIPIELKAMHEVVRFSDLKSYKEI
Sequences:
>Translated_542_residues MIIMADLDRKLIEILDILSKSKEPVGAKIIAKELNKRGYKIGERAVRYHLKLLDGMKLTKKVGYAGRVITERGLEELEKA NISYRLGSIYSNILEKTISANYRFGYVVINRCQVYADFNDVLKIIKSVYESGLAVGDRVGIIDREKFVEINTLCSLNFDN ILLQNGIFPLHVCAGVVKYEDGKPVEFKEIIDYKSTSIDPLRAFIEKKETDVMGIIENGEGYLPANFRYFGVEFLERFET ILEIDELKCIISYGTENVLGLDVGDDKVGVALIGGLTPIAPFVENNYCVEICPMSSIVRLESLHKLKKNPRDIVTKKANI RIKTALSKMFNAMAKVTYDIDEADGDVIVNTAFIDKKYLDEAFDILKEAYKKGLGISDRFGIVEENDRIKIQTICAVTLD GIFLRNSVPLIPKYGGILEITEDKERFIDIIGYDGSSLDPHEVFFNFVDCEKTFLAGFREVHRVAREKLEEVLKKLNWNG IKAIGEPNNELYGIGVNKDMCGVVTMGGINPLVLLKENEIPIELKAMHEVVRFSDLKSYKEI >Mature_542_residues MIIMADLDRKLIEILDILSKSKEPVGAKIIAKELNKRGYKIGERAVRYHLKLLDGMKLTKKVGYAGRVITERGLEELEKA NISYRLGSIYSNILEKTISANYRFGYVVINRCQVYADFNDVLKIIKSVYESGLAVGDRVGIIDREKFVEINTLCSLNFDN ILLQNGIFPLHVCAGVVKYEDGKPVEFKEIIDYKSTSIDPLRAFIEKKETDVMGIIENGEGYLPANFRYFGVEFLERFET ILEIDELKCIISYGTENVLGLDVGDDKVGVALIGGLTPIAPFVENNYCVEICPMSSIVRLESLHKLKKNPRDIVTKKANI RIKTALSKMFNAMAKVTYDIDEADGDVIVNTAFIDKKYLDEAFDILKEAYKKGLGISDRFGIVEENDRIKIQTICAVTLD GIFLRNSVPLIPKYGGILEITEDKERFIDIIGYDGSSLDPHEVFFNFVDCEKTFLAGFREVHRVAREKLEEVLKKLNWNG IKAIGEPNNELYGIGVNKDMCGVVTMGGINPLVLLKENEIPIELKAMHEVVRFSDLKSYKEI
Specific function: Unknown
COG id: COG1693
COG function: function code S; Uncharacterized protein conserved in archaea
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y159_METJA (Q57623)
Other databases:
- EMBL: L77117 - PIR: H64319 - RefSeq: NP_247127.1 - PDB: 3NEK - PDBsum: 3NEK - ProteinModelPortal: Q57623 - GeneID: 1451006 - GenomeReviews: L77117_GR - KEGG: mja:MJ_0159 - NMPDR: fig|243232.1.peg.164 - TIGR: MJ0159 - HOGENOM: HBG539003 - OMA: PHEVFFN - ProtClustDB: CLSK2749847 - BioCyc: MJAN243232:MJ_0159-MONOMER - InterPro: IPR002846 - InterPro: IPR013668 - InterPro: IPR011991 - Gene3D: G3DSA:1.10.10.10
Pfam domain/function: PF01995 DUF128; PF08461 HTH_12
EC number: NA
Molecular weight: Translated: 61196; Mature: 61196
Theoretical pI: Translated: 5.40; Mature: 5.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIIMADLDRKLIEILDILSKSKEPVGAKIIAKELNKRGYKIGERAVRYHLKLLDGMKLTK CEEEECCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHH KVGYAGRVITERGLEELEKANISYRLGSIYSNILEKTISANYRFGYVVINRCQVYADFND HHCCCCHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHCCCCEEEEEEEEEEEEEECHHH VLKIIKSVYESGLAVGDRVGIIDREKFVEINTLCSLNFDNILLQNGIFPLHVCAGVVKYE HHHHHHHHHHCCCCCCCCCCCCCHHHEEEEEHEEECCCCHHHHHCCCHHHHHHHHHHEEC DGKPVEFKEIIDYKSTSIDPLRAFIEKKETDVMGIIENGEGYLPANFRYFGVEFLERFET CCCCCCHHHHHCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHH ILEIDELKCIISYGTENVLGLDVGDDKVGVALIGGLTPIAPFVENNYCVEICPMSSIVRL HHHHHHHEEEEECCCCCEEEEECCCCCCCEEEECCCCHHHHHHCCCCEEEECCCHHHHHH ESLHKLKKNPRDIVTKKANIRIKTALSKMFNAMAKVTYDIDEADGDVIVNTAFIDKKYLD HHHHHHHCCCHHHHCCCCCEEHHHHHHHHHHHHHHEEEEECCCCCCEEEEEEHHHHHHHH EAFDILKEAYKKGLGISDRFGIVEENDRIKIQTICAVTLDGIFLRNSVPLIPKYGGILEI HHHHHHHHHHHCCCCCCCCCCEEECCCCEEEEEEEEEHCCCEEEECCCCCCCCCCCEEEE TEDKERFIDIIGYDGSSLDPHEVFFNFVDCEKTFLAGFREVHRVAREKLEEVLKKLNWNG ECCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC IKAIGEPNNELYGIGVNKDMCGVVTMGGINPLVLLKENEIPIELKAMHEVVRFSDLKSYK EEECCCCCCCEEEEECCCCCCCEEEECCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHH EI CC >Mature Secondary Structure MIIMADLDRKLIEILDILSKSKEPVGAKIIAKELNKRGYKIGERAVRYHLKLLDGMKLTK CEEEECCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHH KVGYAGRVITERGLEELEKANISYRLGSIYSNILEKTISANYRFGYVVINRCQVYADFND HHCCCCHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHCCCCEEEEEEEEEEEEEECHHH VLKIIKSVYESGLAVGDRVGIIDREKFVEINTLCSLNFDNILLQNGIFPLHVCAGVVKYE HHHHHHHHHHCCCCCCCCCCCCCHHHEEEEEHEEECCCCHHHHHCCCHHHHHHHHHHEEC DGKPVEFKEIIDYKSTSIDPLRAFIEKKETDVMGIIENGEGYLPANFRYFGVEFLERFET CCCCCCHHHHHCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHH ILEIDELKCIISYGTENVLGLDVGDDKVGVALIGGLTPIAPFVENNYCVEICPMSSIVRL HHHHHHHEEEEECCCCCEEEEECCCCCCCEEEECCCCHHHHHHCCCCEEEECCCHHHHHH ESLHKLKKNPRDIVTKKANIRIKTALSKMFNAMAKVTYDIDEADGDVIVNTAFIDKKYLD HHHHHHHCCCHHHHCCCCCEEHHHHHHHHHHHHHHEEEEECCCCCCEEEEEEHHHHHHHH EAFDILKEAYKKGLGISDRFGIVEENDRIKIQTICAVTLDGIFLRNSVPLIPKYGGILEI HHHHHHHHHHHCCCCCCCCCCEEECCCCEEEEEEEEEHCCCEEEECCCCCCCCCCCEEEE TEDKERFIDIIGYDGSSLDPHEVFFNFVDCEKTFLAGFREVHRVAREKLEEVLKKLNWNG ECCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC IKAIGEPNNELYGIGVNKDMCGVVTMGGINPLVLLKENEIPIELKAMHEVVRFSDLKSYK EEECCCCCCCEEEEECCCCCCCEEEECCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHH EI CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087