Definition Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome.
Accession NC_000909
Length 1,664,970

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The map label for this gene is 15668331

Identifier: 15668331

GI number: 15668331

Start: 161424

End: 163052

Strand: Reverse

Name: 15668331

Synonym: MJ0159

Alternate gene names: NA

Gene position: 163052-161424 (Counterclockwise)

Preceding gene: 15668332

Following gene: 15668321

Centisome position: 9.79

GC content: 32.41

Gene sequence:

>1629_bases
GTGATAATAATGGCAGACCTTGATAGGAAGTTAATAGAAATTTTAGATATTTTATCTAAATCAAAAGAGCCTGTAGGGGC
TAAAATTATAGCTAAAGAACTTAATAAGAGGGGTTATAAAATTGGAGAGAGGGCTGTGAGATATCATTTAAAGTTATTGG
ATGGGATGAAATTAACAAAAAAAGTTGGTTATGCTGGAAGGGTTATAACTGAGAGAGGTTTAGAGGAGTTGGAGAAAGCT
AATATATCTTATAGACTGGGGAGTATTTACTCGAATATATTGGAAAAAACAATATCTGCCAACTATAGGTTTGGATATGT
AGTTATCAACAGATGTCAGGTTTATGCAGACTTTAATGATGTGTTAAAAATAATAAAAAGTGTCTATGAGTCTGGTTTGG
CTGTTGGGGATAGAGTTGGAATTATAGATAGGGAAAAATTCGTGGAAATAAATACCCTCTGCTCATTAAACTTTGATAAT
ATCCTACTACAAAATGGCATTTTTCCACTCCATGTATGTGCTGGAGTTGTTAAATATGAGGATGGAAAACCAGTAGAATT
TAAAGAAATTATAGATTACAAATCTACATCTATAGACCCATTGAGAGCATTTATTGAGAAGAAAGAAACAGATGTTATGG
GTATTATAGAGAATGGGGAGGGTTATTTACCAGCAAACTTTAGATACTTTGGAGTTGAGTTTTTGGAGAGATTTGAGACT
ATATTGGAGATAGATGAATTAAAATGTATTATTAGTTATGGGACAGAAAATGTTTTAGGATTAGATGTTGGAGATGATAA
GGTGGGAGTCGCTTTAATTGGAGGTCTAACACCAATAGCTCCATTTGTTGAAAACAACTACTGCGTTGAAATTTGTCCAA
TGTCATCAATTGTTAGATTAGAATCTCTCCATAAGCTTAAAAAGAATCCAAGGGATATAGTAACAAAGAAGGCAAATATA
AGAATAAAAACCGCTTTATCAAAAATGTTCAATGCAATGGCAAAGGTAACCTATGATATAGATGAAGCTGATGGAGATGT
TATAGTAAATACTGCATTTATCGATAAAAAATACCTTGATGAGGCATTTGATATACTAAAAGAGGCATATAAAAAAGGTT
TAGGCATATCCGACAGATTTGGAATTGTTGAAGAAAATGATAGGATAAAAATTCAAACAATCTGTGCTGTAACCTTAGAT
GGAATATTTTTAAGAAACTCAGTTCCTCTCATACCAAAATATGGGGGGATTTTGGAGATAACTGAAGATAAGGAGAGGTT
TATTGATATAATTGGTTATGATGGTTCGTCATTAGACCCTCATGAAGTTTTCTTTAATTTTGTTGATTGTGAAAAAACAT
TTTTGGCAGGATTTAGGGAAGTGCATAGAGTTGCAAGAGAGAAATTAGAAGAAGTTTTAAAGAAATTAAATTGGAATGGT
ATTAAAGCTATAGGAGAGCCAAACAATGAACTTTATGGTATTGGCGTGAATAAAGACATGTGTGGAGTTGTAACAATGGG
GGGAATAAATCCCTTAGTGTTATTGAAAGAGAATGAAATACCTATTGAGTTAAAGGCAATGCATGAAGTTGTTAGATTTT
CAGATTTAAAGAGTTATAAGGAGATTTAA

Upstream 100 bases:

>100_bases
ACAAGGGGAAGGGCAGATCCAAAGAGAGTCATTGAGTTATTGAAAGAGAGATTAGATAAATAAATTTTTATTATTCTTTT
TTTTAATAATTATTTTTTAG

Downstream 100 bases:

>100_bases
ACTCATATATCCTAAATACTCTCATTAAAGTGGGGCTGAACGAAGTGAAGCCCCGCTCGGGTATCCCAATAGGGGCTTCC
CCTATGGATTTAAAGAGTTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 542; Mature: 542

Protein sequence:

>542_residues
MIIMADLDRKLIEILDILSKSKEPVGAKIIAKELNKRGYKIGERAVRYHLKLLDGMKLTKKVGYAGRVITERGLEELEKA
NISYRLGSIYSNILEKTISANYRFGYVVINRCQVYADFNDVLKIIKSVYESGLAVGDRVGIIDREKFVEINTLCSLNFDN
ILLQNGIFPLHVCAGVVKYEDGKPVEFKEIIDYKSTSIDPLRAFIEKKETDVMGIIENGEGYLPANFRYFGVEFLERFET
ILEIDELKCIISYGTENVLGLDVGDDKVGVALIGGLTPIAPFVENNYCVEICPMSSIVRLESLHKLKKNPRDIVTKKANI
RIKTALSKMFNAMAKVTYDIDEADGDVIVNTAFIDKKYLDEAFDILKEAYKKGLGISDRFGIVEENDRIKIQTICAVTLD
GIFLRNSVPLIPKYGGILEITEDKERFIDIIGYDGSSLDPHEVFFNFVDCEKTFLAGFREVHRVAREKLEEVLKKLNWNG
IKAIGEPNNELYGIGVNKDMCGVVTMGGINPLVLLKENEIPIELKAMHEVVRFSDLKSYKEI

Sequences:

>Translated_542_residues
MIIMADLDRKLIEILDILSKSKEPVGAKIIAKELNKRGYKIGERAVRYHLKLLDGMKLTKKVGYAGRVITERGLEELEKA
NISYRLGSIYSNILEKTISANYRFGYVVINRCQVYADFNDVLKIIKSVYESGLAVGDRVGIIDREKFVEINTLCSLNFDN
ILLQNGIFPLHVCAGVVKYEDGKPVEFKEIIDYKSTSIDPLRAFIEKKETDVMGIIENGEGYLPANFRYFGVEFLERFET
ILEIDELKCIISYGTENVLGLDVGDDKVGVALIGGLTPIAPFVENNYCVEICPMSSIVRLESLHKLKKNPRDIVTKKANI
RIKTALSKMFNAMAKVTYDIDEADGDVIVNTAFIDKKYLDEAFDILKEAYKKGLGISDRFGIVEENDRIKIQTICAVTLD
GIFLRNSVPLIPKYGGILEITEDKERFIDIIGYDGSSLDPHEVFFNFVDCEKTFLAGFREVHRVAREKLEEVLKKLNWNG
IKAIGEPNNELYGIGVNKDMCGVVTMGGINPLVLLKENEIPIELKAMHEVVRFSDLKSYKEI
>Mature_542_residues
MIIMADLDRKLIEILDILSKSKEPVGAKIIAKELNKRGYKIGERAVRYHLKLLDGMKLTKKVGYAGRVITERGLEELEKA
NISYRLGSIYSNILEKTISANYRFGYVVINRCQVYADFNDVLKIIKSVYESGLAVGDRVGIIDREKFVEINTLCSLNFDN
ILLQNGIFPLHVCAGVVKYEDGKPVEFKEIIDYKSTSIDPLRAFIEKKETDVMGIIENGEGYLPANFRYFGVEFLERFET
ILEIDELKCIISYGTENVLGLDVGDDKVGVALIGGLTPIAPFVENNYCVEICPMSSIVRLESLHKLKKNPRDIVTKKANI
RIKTALSKMFNAMAKVTYDIDEADGDVIVNTAFIDKKYLDEAFDILKEAYKKGLGISDRFGIVEENDRIKIQTICAVTLD
GIFLRNSVPLIPKYGGILEITEDKERFIDIIGYDGSSLDPHEVFFNFVDCEKTFLAGFREVHRVAREKLEEVLKKLNWNG
IKAIGEPNNELYGIGVNKDMCGVVTMGGINPLVLLKENEIPIELKAMHEVVRFSDLKSYKEI

Specific function: Unknown

COG id: COG1693

COG function: function code S; Uncharacterized protein conserved in archaea

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y159_METJA (Q57623)

Other databases:

- EMBL:   L77117
- PIR:   H64319
- RefSeq:   NP_247127.1
- PDB:   3NEK
- PDBsum:   3NEK
- ProteinModelPortal:   Q57623
- GeneID:   1451006
- GenomeReviews:   L77117_GR
- KEGG:   mja:MJ_0159
- NMPDR:   fig|243232.1.peg.164
- TIGR:   MJ0159
- HOGENOM:   HBG539003
- OMA:   PHEVFFN
- ProtClustDB:   CLSK2749847
- BioCyc:   MJAN243232:MJ_0159-MONOMER
- InterPro:   IPR002846
- InterPro:   IPR013668
- InterPro:   IPR011991
- Gene3D:   G3DSA:1.10.10.10

Pfam domain/function: PF01995 DUF128; PF08461 HTH_12

EC number: NA

Molecular weight: Translated: 61196; Mature: 61196

Theoretical pI: Translated: 5.40; Mature: 5.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIIMADLDRKLIEILDILSKSKEPVGAKIIAKELNKRGYKIGERAVRYHLKLLDGMKLTK
CEEEECCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHH
KVGYAGRVITERGLEELEKANISYRLGSIYSNILEKTISANYRFGYVVINRCQVYADFND
HHCCCCHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHCCCCEEEEEEEEEEEEEECHHH
VLKIIKSVYESGLAVGDRVGIIDREKFVEINTLCSLNFDNILLQNGIFPLHVCAGVVKYE
HHHHHHHHHHCCCCCCCCCCCCCHHHEEEEEHEEECCCCHHHHHCCCHHHHHHHHHHEEC
DGKPVEFKEIIDYKSTSIDPLRAFIEKKETDVMGIIENGEGYLPANFRYFGVEFLERFET
CCCCCCHHHHHCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHH
ILEIDELKCIISYGTENVLGLDVGDDKVGVALIGGLTPIAPFVENNYCVEICPMSSIVRL
HHHHHHHEEEEECCCCCEEEEECCCCCCCEEEECCCCHHHHHHCCCCEEEECCCHHHHHH
ESLHKLKKNPRDIVTKKANIRIKTALSKMFNAMAKVTYDIDEADGDVIVNTAFIDKKYLD
HHHHHHHCCCHHHHCCCCCEEHHHHHHHHHHHHHHEEEEECCCCCCEEEEEEHHHHHHHH
EAFDILKEAYKKGLGISDRFGIVEENDRIKIQTICAVTLDGIFLRNSVPLIPKYGGILEI
HHHHHHHHHHHCCCCCCCCCCEEECCCCEEEEEEEEEHCCCEEEECCCCCCCCCCCEEEE
TEDKERFIDIIGYDGSSLDPHEVFFNFVDCEKTFLAGFREVHRVAREKLEEVLKKLNWNG
ECCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
IKAIGEPNNELYGIGVNKDMCGVVTMGGINPLVLLKENEIPIELKAMHEVVRFSDLKSYK
EEECCCCCCCEEEEECCCCCCCEEEECCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHH
EI
CC
>Mature Secondary Structure
MIIMADLDRKLIEILDILSKSKEPVGAKIIAKELNKRGYKIGERAVRYHLKLLDGMKLTK
CEEEECCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHH
KVGYAGRVITERGLEELEKANISYRLGSIYSNILEKTISANYRFGYVVINRCQVYADFND
HHCCCCHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHCCCCEEEEEEEEEEEEEECHHH
VLKIIKSVYESGLAVGDRVGIIDREKFVEINTLCSLNFDNILLQNGIFPLHVCAGVVKYE
HHHHHHHHHHCCCCCCCCCCCCCHHHEEEEEHEEECCCCHHHHHCCCHHHHHHHHHHEEC
DGKPVEFKEIIDYKSTSIDPLRAFIEKKETDVMGIIENGEGYLPANFRYFGVEFLERFET
CCCCCCHHHHHCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHH
ILEIDELKCIISYGTENVLGLDVGDDKVGVALIGGLTPIAPFVENNYCVEICPMSSIVRL
HHHHHHHEEEEECCCCCEEEEECCCCCCCEEEECCCCHHHHHHCCCCEEEECCCHHHHHH
ESLHKLKKNPRDIVTKKANIRIKTALSKMFNAMAKVTYDIDEADGDVIVNTAFIDKKYLD
HHHHHHHCCCHHHHCCCCCEEHHHHHHHHHHHHHHEEEEECCCCCCEEEEEEHHHHHHHH
EAFDILKEAYKKGLGISDRFGIVEENDRIKIQTICAVTLDGIFLRNSVPLIPKYGGILEI
HHHHHHHHHHHCCCCCCCCCCEEECCCCEEEEEEEEEHCCCEEEECCCCCCCCCCCEEEE
TEDKERFIDIIGYDGSSLDPHEVFFNFVDCEKTFLAGFREVHRVAREKLEEVLKKLNWNG
ECCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
IKAIGEPNNELYGIGVNKDMCGVVTMGGINPLVLLKENEIPIELKAMHEVVRFSDLKSYK
EEECCCCCCCEEEEECCCCCCCEEEECCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHH
EI
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087