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The map label for this gene is 15668265

Identifier: 15668265

GI number: 15668265

Start: 88561

End: 89493

Strand: Reverse

Name: 15668265

Synonym: MJ0094

Alternate gene names: NA

Gene position: 89493-88561 (Counterclockwise)

Preceding gene: 15668266

Following gene: 15668264

Centisome position: 5.38

GC content: 34.62

Gene sequence:

>933_bases
TTGGTGATTCTAATGTATGAGATAGTTAGATACGAAGGAGGGGTTTATAAAAACAACATCTTCAAAGAATGGATTGAGGA
TATCGGAGGTTTTGTTATTCAAGAGCACGTTATGCAGTTAGACGTTTATATGACCTTGGCAATTCCTCAAAATGAACTTG
AAAATATCAAAGAGGAAGCTAAAAAATATAAGGGTAAGATTATAGAAACCCCGTTGGCAGGGACTGAAATAGCTGTTGTG
GCTCCAAGTTTATCAAGACATCACCTCCCACATACTGCCTGTGATATTTCAGAATATTTGAGAAGATTTGGAGCTAAGCC
AAACATGATTGGTTTAGCAAGAGGGGTTGGGAGAGACATAGCCCAATTGAGAGAAAAAGAAAGGAGATTAATAGAGGAGC
ATGATTTGGCTGTTTATGTAATGGGTAATTTTGAGGATTGCATTAAAAATAAAACCCATCTATTTGATGTGGATATTCCA
GTTGTTGTTACTGGAGGACCTGAAAAAATAGATATTCCTTACCCGTATGTTGGAAATCTTGGGAGAAGAAGCCATAGATT
AAGGCATGGAGAAGAAATTAGAGCTTTAAGAAAGATGGTTGAGGTAATAACAGAACTTATAAATGAGAGGAGGAGAGAGT
TATCTTACGACCCTCCAATTGTTCCACCAGTAGTTGTTAAAGATGAGATTGAGAAGCAGGTTGAAGAAGTTTATTCAATT
TTATCTCCAATGCCTATCGTTACTCAATTGGATGGTTTGAGAGTTAAGTTAGATTATGATAAATATGCAGATAAAATTAG
GGAAGTTAAAGTCAAAAACTATACATTGGGAGATATAGCAGATATTAAAAGAAGTGAGATGAAAAACTATATATTAATAA
AAATAAAACCAAAATCAGAAGTTGAATTTGAGATGCATAAGGATAAAGCTTAA

Upstream 100 bases:

>100_bases
TGCTTATAGAAGAAAAAAGAAAAAGTTAATAGAAACTTTATATTGCCTGGTAAAAAATAAAAAGCTGAAACATAATAAGA
TAGTTTTTAAGAAATAAACT

Downstream 100 bases:

>100_bases
ATTATTTTTATAATTTTTATAAATAACATTACGAGGGAGAAACATGGAGAACTTTAATTTTAAATGCTATGATATAGATG
AAAAGGAAATCCCAATACCT

Product: methyl coenzyme M reductase II protein MtrC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 310; Mature: 310

Protein sequence:

>310_residues
MVILMYEIVRYEGGVYKNNIFKEWIEDIGGFVIQEHVMQLDVYMTLAIPQNELENIKEEAKKYKGKIIETPLAGTEIAVV
APSLSRHHLPHTACDISEYLRRFGAKPNMIGLARGVGRDIAQLREKERRLIEEHDLAVYVMGNFEDCIKNKTHLFDVDIP
VVVTGGPEKIDIPYPYVGNLGRRSHRLRHGEEIRALRKMVEVITELINERRRELSYDPPIVPPVVVKDEIEKQVEEVYSI
LSPMPIVTQLDGLRVKLDYDKYADKIREVKVKNYTLGDIADIKRSEMKNYILIKIKPKSEVEFEMHKDKA

Sequences:

>Translated_310_residues
MVILMYEIVRYEGGVYKNNIFKEWIEDIGGFVIQEHVMQLDVYMTLAIPQNELENIKEEAKKYKGKIIETPLAGTEIAVV
APSLSRHHLPHTACDISEYLRRFGAKPNMIGLARGVGRDIAQLREKERRLIEEHDLAVYVMGNFEDCIKNKTHLFDVDIP
VVVTGGPEKIDIPYPYVGNLGRRSHRLRHGEEIRALRKMVEVITELINERRRELSYDPPIVPPVVVKDEIEKQVEEVYSI
LSPMPIVTQLDGLRVKLDYDKYADKIREVKVKNYTLGDIADIKRSEMKNYILIKIKPKSEVEFEMHKDKA
>Mature_310_residues
MVILMYEIVRYEGGVYKNNIFKEWIEDIGGFVIQEHVMQLDVYMTLAIPQNELENIKEEAKKYKGKIIETPLAGTEIAVV
APSLSRHHLPHTACDISEYLRRFGAKPNMIGLARGVGRDIAQLREKERRLIEEHDLAVYVMGNFEDCIKNKTHLFDVDIP
VVVTGGPEKIDIPYPYVGNLGRRSHRLRHGEEIRALRKMVEVITELINERRRELSYDPPIVPPVVVKDEIEKQVEEVYSI
LSPMPIVTQLDGLRVKLDYDKYADKIREVKVKNYTLGDIADIKRSEMKNYILIKIKPKSEVEFEMHKDKA

Specific function: Unknown

COG id: COG4052

COG function: function code R; Uncharacterized protein related to methyl coenzyme M reductase subunit C

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y094_METJA (Q57559)

Other databases:

- EMBL:   L77117
- PIR:   F64311
- RefSeq:   NP_247058.1
- ProteinModelPortal:   Q57559
- GeneID:   1450933
- GenomeReviews:   L77117_GR
- KEGG:   mja:MJ_0094
- NMPDR:   fig|243232.1.peg.95
- TIGR:   MJ0094
- HOGENOM:   HBG539148
- OMA:   NMIGLAR
- ProtClustDB:   CLSK876067
- BioCyc:   MJAN243232:MJ_0094-MONOMER
- GO:   GO:0015948
- InterPro:   IPR007687
- InterPro:   IPR011312
- PIRSF:   PIRSF019164
- TIGRFAMs:   TIGR03274

Pfam domain/function: PF04609 MCR_C

EC number: NA

Molecular weight: Translated: 35866; Mature: 35866

Theoretical pI: Translated: 6.81; Mature: 6.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVILMYEIVRYEGGVYKNNIFKEWIEDIGGFVIQEHVMQLDVYMTLAIPQNELENIKEEA
CEEEEEEHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCHHHHHHHHHHH
KKYKGKIIETPLAGTEIAVVAPSLSRHHLPHTACDISEYLRRFGAKPNMIGLARGVGRDI
HHHCCCEEECCCCCCEEEEECCCHHHCCCCCHHHHHHHHHHHHCCCCCEEHHHHHCCHHH
AQLREKERRLIEEHDLAVYVMGNFEDCIKNKTHLFDVDIPVVVTGGPEKIDIPYPYVGNL
HHHHHHHHHHHHHCCEEEEEECCHHHHHCCCCEEEECCCCEEEECCCCEECCCCCCCCCC
GRRSHRLRHGEEIRALRKMVEVITELINERRRELSYDPPIVPPVVVKDEIEKQVEEVYSI
CHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEHHHHHHHHHHHHHH
LSPMPIVTQLDGLRVKLDYDKYADKIREVKVKNYTLGDIADIKRSEMKNYILIKIKPKSE
HCCCCHHCCCCCEEEEECHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCEEEEEECCCCC
VEFEMHKDKA
CEEHCCCCCC
>Mature Secondary Structure
MVILMYEIVRYEGGVYKNNIFKEWIEDIGGFVIQEHVMQLDVYMTLAIPQNELENIKEEA
CEEEEEEHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCHHHHHHHHHHH
KKYKGKIIETPLAGTEIAVVAPSLSRHHLPHTACDISEYLRRFGAKPNMIGLARGVGRDI
HHHCCCEEECCCCCCEEEEECCCHHHCCCCCHHHHHHHHHHHHCCCCCEEHHHHHCCHHH
AQLREKERRLIEEHDLAVYVMGNFEDCIKNKTHLFDVDIPVVVTGGPEKIDIPYPYVGNL
HHHHHHHHHHHHHCCEEEEEECCHHHHHCCCCEEEECCCCEEEECCCCEECCCCCCCCCC
GRRSHRLRHGEEIRALRKMVEVITELINERRRELSYDPPIVPPVVVKDEIEKQVEEVYSI
CHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEHHHHHHHHHHHHHH
LSPMPIVTQLDGLRVKLDYDKYADKIREVKVKNYTLGDIADIKRSEMKNYILIKIKPKSE
HCCCCHHCCCCCEEEEECHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCEEEEEECCCCC
VEFEMHKDKA
CEEHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087