Definition Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome.
Accession NC_000909
Length 1,664,970

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The map label for this gene is 15668264

Identifier: 15668264

GI number: 15668264

Start: 88089

End: 88517

Strand: Reverse

Name: 15668264

Synonym: MJ0093

Alternate gene names: NA

Gene position: 88517-88089 (Counterclockwise)

Preceding gene: 15668265

Following gene: 15668251

Centisome position: 5.32

GC content: 28.67

Gene sequence:

>429_bases
ATGGAGAACTTTAATTTTAAATGCTATGATATAGATGAAAAGGAAATCCCAATACCTCCTGGATTACCTCAATCAATAAT
TGCCAGATTGATAGAGATTTGTAATGTAAAATTTGACATTAGGGAGGATGAAATATACAATGTTAAATATCCAGTGTTAA
TAGGAAAAGAAGAAGATTTAAAAGAAGCTAAAAAATATTTAGAGTTAATTACTGAAGCAAAATTGACTTTAAGAGATATT
GCAAGATTGGCGAGGAGATTTAAAGTAAAAGCTAAGATTTACACAGATGATGAAGATTTGAGATATATTTTAGATGTTTT
GAGTAACGATATAGCCAATAAGGATTATATAGAGATTGTTGAAGAGATGCCAGAAGGAGATAAAGAGGTTATTGAAATTG
GAGACAAAAAAATATACGTTGGAATATAA

Upstream 100 bases:

>100_bases
ATAAAAATAAAACCAAAATCAGAAGTTGAATTTGAGATGCATAAGGATAAAGCTTAAATTATTTTTATAATTTTTATAAA
TAACATTACGAGGGAGAAAC

Downstream 100 bases:

>100_bases
ATAAAATTAAATGACTTTAGCCAATAGAGAGACAATATTCATAACATCTATTTCCTTATCTATTTTATTCTCCTCCTTAA
ACCTTTTTAAGCTATCTCTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 142; Mature: 142

Protein sequence:

>142_residues
MENFNFKCYDIDEKEIPIPPGLPQSIIARLIEICNVKFDIREDEIYNVKYPVLIGKEEDLKEAKKYLELITEAKLTLRDI
ARLARRFKVKAKIYTDDEDLRYILDVLSNDIANKDYIEIVEEMPEGDKEVIEIGDKKIYVGI

Sequences:

>Translated_142_residues
MENFNFKCYDIDEKEIPIPPGLPQSIIARLIEICNVKFDIREDEIYNVKYPVLIGKEEDLKEAKKYLELITEAKLTLRDI
ARLARRFKVKAKIYTDDEDLRYILDVLSNDIANKDYIEIVEEMPEGDKEVIEIGDKKIYVGI
>Mature_142_residues
MENFNFKCYDIDEKEIPIPPGLPQSIIARLIEICNVKFDIREDEIYNVKYPVLIGKEEDLKEAKKYLELITEAKLTLRDI
ARLARRFKVKAKIYTDDEDLRYILDVLSNDIANKDYIEIVEEMPEGDKEVIEIGDKKIYVGI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y093_METJA (Q57558)

Other databases:

- EMBL:   L77117
- PIR:   E64311
- RefSeq:   NP_247057.1
- GeneID:   1450932
- GenomeReviews:   L77117_GR
- KEGG:   mja:MJ_0093
- NMPDR:   fig|243232.1.peg.94
- TIGR:   MJ0093
- HOGENOM:   HBG540979
- OMA:   FTELKLA
- ProtClustDB:   CLSK876066
- BioCyc:   MJAN243232:MJ_0093-MONOMER

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16643; Mature: 16643

Theoretical pI: Translated: 4.43; Mature: 4.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MENFNFKCYDIDEKEIPIPPGLPQSIIARLIEICNVKFDIREDEIYNVKYPVLIGKEEDL
CCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCEEECCCCCEEEEEEEEEECCHHHH
KEAKKYLELITEAKLTLRDIARLARRFKVKAKIYTDDEDLRYILDVLSNDIANKDYIEIV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCHHHHHHHHHHHHCCCCHHHHHHH
EEMPEGDKEVIEIGDKKIYVGI
HHCCCCCHHHHHCCCCEEEEEC
>Mature Secondary Structure
MENFNFKCYDIDEKEIPIPPGLPQSIIARLIEICNVKFDIREDEIYNVKYPVLIGKEEDL
CCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCEEECCCCCEEEEEEEEEECCHHHH
KEAKKYLELITEAKLTLRDIARLARRFKVKAKIYTDDEDLRYILDVLSNDIANKDYIEIV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCHHHHHHHHHHHHCCCCHHHHHHH
EEMPEGDKEVIEIGDKKIYVGI
HHCCCCCHHHHHCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087