| Definition | Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome. |
|---|---|
| Accession | NC_000909 |
| Length | 1,664,970 |
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The map label for this gene is 15668259
Identifier: 15668259
GI number: 15668259
Start: 82998
End: 83540
Strand: Direct
Name: 15668259
Synonym: MJ0088
Alternate gene names: NA
Gene position: 82998-83540 (Clockwise)
Preceding gene: 15668258
Following gene: 15668260
Centisome position: 4.98
GC content: 25.97
Gene sequence:
>543_bases TTGCCAAATATTTGGGGTGGAATGTTGGAAAAAACTGTAAAAATAACCTTTATCTTCGAATCAGAAAAAAGGTTGAACTG GGAAGGTTATGTAAATTATTTAATATTTGCTCATTATTTTAAATTAATTTATATTTTATTGAGAAACAATAAAGAACTTT TAGAGAGGATTTTAAAGGATTCTCTGGATAATAAAGAAGACTATCATAAATTAGGGAAGTATTTGCATCATGATATAATG GGATATATTAGAAGACATGGATATCTCTCATTTCTACCTTTTACTCCACTTCCATTTTATAAAGAGCTATGTGAAAAATT CATGACTAAAATTCCAGAAAAGCCAATAATTGATTATAAATGCATTGAGAGAATTGAAAATAATAAGATAATCTTTGAGT TTGAAGGAGAGGAGGAGTGTTTAAGATGTTTAATGTATTTAAAAGATTCATCCATAGATGAATCAATTAAAGTTATAAAA TCAGAAGAAATGGTAGTTAAAATATTGGAAATTTTGCTATATATCTTGCATAATTTATTATAG
Upstream 100 bases:
>100_bases GTTGCCAGTTGGGATTTTAACATCTTTCTTAGGAGCTCCGATGTTTCTTTACTTGCTGTTAAAGATGTATAAAAGAGTAT AATAATAGTATATTATTAGT
Downstream 100 bases:
>100_bases GTGAGTTTAATGATTCTCTCTGTTGATGGAGTTGAATTTGCATATAAAAGTAGGCAAATACTAAACAACATAAAATTTGA GGTTAAAAGAGGAGAGGTTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 180; Mature: 179
Protein sequence:
>180_residues MPNIWGGMLEKTVKITFIFESEKRLNWEGYVNYLIFAHYFKLIYILLRNNKELLERILKDSLDNKEDYHKLGKYLHHDIM GYIRRHGYLSFLPFTPLPFYKELCEKFMTKIPEKPIIDYKCIERIENNKIIFEFEGEEECLRCLMYLKDSSIDESIKVIK SEEMVVKILEILLYILHNLL
Sequences:
>Translated_180_residues MPNIWGGMLEKTVKITFIFESEKRLNWEGYVNYLIFAHYFKLIYILLRNNKELLERILKDSLDNKEDYHKLGKYLHHDIM GYIRRHGYLSFLPFTPLPFYKELCEKFMTKIPEKPIIDYKCIERIENNKIIFEFEGEEECLRCLMYLKDSSIDESIKVIK SEEMVVKILEILLYILHNLL >Mature_179_residues PNIWGGMLEKTVKITFIFESEKRLNWEGYVNYLIFAHYFKLIYILLRNNKELLERILKDSLDNKEDYHKLGKYLHHDIMG YIRRHGYLSFLPFTPLPFYKELCEKFMTKIPEKPIIDYKCIERIENNKIIFEFEGEEECLRCLMYLKDSSIDESIKVIKS EEMVVKILEILLYILHNLL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y088_METJA (Q57553)
Other databases:
- EMBL: L77117 - PIR: H64310 - RefSeq: NP_247052.1 - GeneID: 1450927 - GenomeReviews: L77117_GR - KEGG: mja:MJ_0088 - NMPDR: fig|243232.1.peg.89 - TIGR: MJ0088 - ProtClustDB: CLSK2749836 - BioCyc: MJAN243232:MJ_0088-MONOMER
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21797; Mature: 21666
Theoretical pI: Translated: 6.79; Mature: 6.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPNIWGGMLEKTVKITFIFESEKRLNWEGYVNYLIFAHYFKLIYILLRNNKELLERILKD CCCHHHHHHHHHEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH SLDNKEDYHKLGKYLHHDIMGYIRRHGYLSFLPFTPLPFYKELCEKFMTKIPEKPIIDYK CCCCHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHHHHCCCCCCCCHH CIERIENNKIIFEFEGEEECLRCLMYLKDSSIDESIKVIKSEEMVVKILEILLYILHNLL HHHHHCCCCEEEEECCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure PNIWGGMLEKTVKITFIFESEKRLNWEGYVNYLIFAHYFKLIYILLRNNKELLERILKD CCHHHHHHHHHEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH SLDNKEDYHKLGKYLHHDIMGYIRRHGYLSFLPFTPLPFYKELCEKFMTKIPEKPIIDYK CCCCHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHHHHCCCCCCCCHH CIERIENNKIIFEFEGEEECLRCLMYLKDSSIDESIKVIKSEEMVVKILEILLYILHNLL HHHHHCCCCEEEEECCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087