| Definition | Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome. |
|---|---|
| Accession | NC_000909 |
| Length | 1,664,970 |
Click here to switch to the map view.
The map label for this gene is 15668239
Identifier: 15668239
GI number: 15668239
Start: 65514
End: 65861
Strand: Reverse
Name: 15668239
Synonym: MJ0068
Alternate gene names: NA
Gene position: 65861-65514 (Counterclockwise)
Preceding gene: 15668245
Following gene: 15668237
Centisome position: 3.96
GC content: 33.62
Gene sequence:
>348_bases ATGCCGAATTATCATGTGACTTTACAAGCTGCATATATTGTGAGAAACGTAGATGATGTTGAAGACGCTATAAGCGTAAC TATATCACAAATAGGGAAGATGTTGAATAAAGAAGGATTGAACTATGTAGATATAGACATTGGATTAACTATCTGTCCGA AATGTGGAGAGTTGGTAGATTGTGTTTTAGTTGTAGCAAGAACAGCTTTGGTTGGTGTTTTACTATCTATGAAGGTATTT AATGCTGAAAGTCCAGAACATGCTATTAGAATAGCTAAGGCAACAATTGGAAAAGTTTTAAAAAATATTCCATTAGAGCC CGTTGATGTTGTAGAGTTAGAAAAATAA
Upstream 100 bases:
>100_bases TATCAAACAATAACTTTAAATAATAGAAGCCGTAACTAAGGTAATTAATAAAAATTAAGATTTTAGATAAAACGAGATTT TTGGTAGTTGGTGAGATAAG
Downstream 100 bases:
>100_bases AAAAAATTAATTAAATTTTAAATTAAATTAAATTTTATAATTTTATCCTTTTTTAAATCCCAGTCCGAATCCTATTAGGA AAGATGTCCCAAACGAAAAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 115; Mature: 114
Protein sequence:
>115_residues MPNYHVTLQAAYIVRNVDDVEDAISVTISQIGKMLNKEGLNYVDIDIGLTICPKCGELVDCVLVVARTALVGVLLSMKVF NAESPEHAIRIAKATIGKVLKNIPLEPVDVVELEK
Sequences:
>Translated_115_residues MPNYHVTLQAAYIVRNVDDVEDAISVTISQIGKMLNKEGLNYVDIDIGLTICPKCGELVDCVLVVARTALVGVLLSMKVF NAESPEHAIRIAKATIGKVLKNIPLEPVDVVELEK >Mature_114_residues PNYHVTLQAAYIVRNVDDVEDAISVTISQIGKMLNKEGLNYVDIDIGLTICPKCGELVDCVLVVARTALVGVLLSMKVFN AESPEHAIRIAKATIGKVLKNIPLEPVDVVELEK
Specific function: Unknown
COG id: COG1885
COG function: function code S; Uncharacterized protein conserved in archaea
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0212 family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y068_METJA (Q60372)
Other databases:
- EMBL: L77117 - PIR: D64308 - RefSeq: NP_247032.1 - GeneID: 1450907 - GenomeReviews: L77117_GR - KEGG: mja:MJ_0068 - NMPDR: fig|243232.1.peg.69 - TIGR: MJ0068 - HOGENOM: HBG497080 - OMA: AHFESAF - ProtClustDB: PRK03922 - BioCyc: MJAN243232:MJ_0068-MONOMER - HAMAP: MF_01223 - InterPro: IPR007564 - PIRSF: PIRSF016934 - ProDom: PD020367
Pfam domain/function: PF04475 DUF555
EC number: NA
Molecular weight: Translated: 12515; Mature: 12384
Theoretical pI: Translated: 4.83; Mature: 4.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPNYHVTLQAAYIVRNVDDVEDAISVTISQIGKMLNKEGLNYVDIDIGLTICPKCGELVD CCCEEEEEEHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECEEECCCHHHHHH CVLVVARTALVGVLLSMKVFNAESPEHAIRIAKATIGKVLKNIPLEPVDVVELEK HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEECC >Mature Secondary Structure PNYHVTLQAAYIVRNVDDVEDAISVTISQIGKMLNKEGLNYVDIDIGLTICPKCGELVD CCEEEEEEHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECEEECCCHHHHHH CVLVVARTALVGVLLSMKVFNAESPEHAIRIAKATIGKVLKNIPLEPVDVVELEK HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087