Definition Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome.
Accession NC_000909
Length 1,664,970

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The map label for this gene is 15668212

Identifier: 15668212

GI number: 15668212

Start: 41880

End: 42527

Strand: Reverse

Name: 15668212

Synonym: MJ0042

Alternate gene names: NA

Gene position: 42527-41880 (Counterclockwise)

Preceding gene: 15668214

Following gene: 15668211

Centisome position: 2.55

GC content: 31.64

Gene sequence:

>648_bases
ATGAATGTGAAATGTCCAGAATGTGGGGCATGGATATATGTTGTTGAAGAAGATAGTGGGGGAGACGCTATGGAAGTAAA
ATGCCCTAAATGTGGGACTTCAATATACGTAGTAAAACCTATGGGTGAGAAAATGAAAAATAAAAGAGATAAAGATTTTT
TAGATGTAAAAATACTTGAAATAGAGGAAACAAAGAAAACTTCACCATATAAAGATACAAAATCTGAGGATGTATTAAAA
GCCCTTAGAGTAAAAGCAAACATAAATGGAGAAATATATGAATTCAGAATATGGCAAATTGCTAAAAAACCAGAATATAG
AGGAATGGTATATGTAGTTAAATCCGTATCTCACTATTGTGGTAGTGTCAAAACTAAAAATTTCCAAGTTGATGAAGATA
ACGATATATACGTAAAGCAAAAATTTGGTATTATTGAGGGAGTTAATAAAAGTAAAATAAAGCTACCAAAAGAAAGAATG
GAAGAGATAGCAGAAAAATTAGGATTTGAGCTTAAAGAGGGAGATGAAGGACTAAGGTTATACTTAGGAGAGAAATATTC
AGAAAATCCACCATTATCACAAAGACCGGAGTTAATTGAAAAGCTTATAAAGTGTTGGATTGCATTTTGGGAGCCAACAA
TGATTTAA

Upstream 100 bases:

>100_bases
TAAGATACAAAAAAGATACCGAAAAGTTTATATATTAGATAACCTAAGGTATTATCTGAGAATGAAAAGGTAATGAAAAG
GTAAAGTTAGGTGATACCTT

Downstream 100 bases:

>100_bases
AACTTACTTAATTTTTAATATTAACTATATTATGAACTATCATGGCTAGTATAATAAATAAGCAAATAATAAGTCCAACG
GGGAGAAACATGGAGATTAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 215; Mature: 215

Protein sequence:

>215_residues
MNVKCPECGAWIYVVEEDSGGDAMEVKCPKCGTSIYVVKPMGEKMKNKRDKDFLDVKILEIEETKKTSPYKDTKSEDVLK
ALRVKANINGEIYEFRIWQIAKKPEYRGMVYVVKSVSHYCGSVKTKNFQVDEDNDIYVKQKFGIIEGVNKSKIKLPKERM
EEIAEKLGFELKEGDEGLRLYLGEKYSENPPLSQRPELIEKLIKCWIAFWEPTMI

Sequences:

>Translated_215_residues
MNVKCPECGAWIYVVEEDSGGDAMEVKCPKCGTSIYVVKPMGEKMKNKRDKDFLDVKILEIEETKKTSPYKDTKSEDVLK
ALRVKANINGEIYEFRIWQIAKKPEYRGMVYVVKSVSHYCGSVKTKNFQVDEDNDIYVKQKFGIIEGVNKSKIKLPKERM
EEIAEKLGFELKEGDEGLRLYLGEKYSENPPLSQRPELIEKLIKCWIAFWEPTMI
>Mature_215_residues
MNVKCPECGAWIYVVEEDSGGDAMEVKCPKCGTSIYVVKPMGEKMKNKRDKDFLDVKILEIEETKKTSPYKDTKSEDVLK
ALRVKANINGEIYEFRIWQIAKKPEYRGMVYVVKSVSHYCGSVKTKNFQVDEDNDIYVKQKFGIIEGVNKSKIKLPKERM
EEIAEKLGFELKEGDEGLRLYLGEKYSENPPLSQRPELIEKLIKCWIAFWEPTMI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y042_METJA (Q60347)

Other databases:

- EMBL:   L77117
- PIR:   B64305
- RefSeq:   NP_247005.1
- ProteinModelPortal:   Q60347
- GeneID:   1450880
- GenomeReviews:   L77117_GR
- KEGG:   mja:MJ_0042
- NMPDR:   fig|243232.1.peg.42
- TIGR:   MJ0042
- BioCyc:   MJAN243232:MJ_0042-MONOMER
- InterPro:   IPR011723
- TIGRFAMs:   TIGR02098

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24892; Mature: 24892

Theoretical pI: Translated: 7.73; Mature: 7.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNVKCPECGAWIYVVEEDSGGDAMEVKCPKCGTSIYVVKPMGEKMKNKRDKDFLDVKILE
CCCCCCCCCEEEEEEEECCCCCEEEEECCCCCCEEEEECCCCHHHHCCCCCCCEEEEEEE
IEETKKTSPYKDTKSEDVLKALRVKANINGEIYEFRIWQIAKKPEYRGMVYVVKSVSHYC
EECCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEEEEEEECCCCCCCHHHHHHHHHHHH
GSVKTKNFQVDEDNDIYVKQKFGIIEGVNKSKIKLPKERMEEIAEKLGFELKEGDEGLRL
CCCCCCCEEECCCCCEEEEEECCEEECCCCCCEECCHHHHHHHHHHHCCEECCCCCCEEE
YLGEKYSENPPLSQRPELIEKLIKCWIAFWEPTMI
EECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MNVKCPECGAWIYVVEEDSGGDAMEVKCPKCGTSIYVVKPMGEKMKNKRDKDFLDVKILE
CCCCCCCCCEEEEEEEECCCCCEEEEECCCCCCEEEEECCCCHHHHCCCCCCCEEEEEEE
IEETKKTSPYKDTKSEDVLKALRVKANINGEIYEFRIWQIAKKPEYRGMVYVVKSVSHYC
EECCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEEEEEEECCCCCCCHHHHHHHHHHHH
GSVKTKNFQVDEDNDIYVKQKFGIIEGVNKSKIKLPKERMEEIAEKLGFELKEGDEGLRL
CCCCCCCEEECCCCCEEEEEECCEEECCCCCCEECCHHHHHHHHHHHCCEECCCCCCEEE
YLGEKYSENPPLSQRPELIEKLIKCWIAFWEPTMI
EECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087