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Identifier: 15646160

GI number: 15646160

Start: 1632600

End: 1635437

Strand: Reverse

Name: Not Available

Synonym: HP1553

Alternate gene names: 15646160

Gene position: 1635437-1632600 (Counterclockwise)

Preceding gene: 15646163

Following gene: 15646159

Centisome position: 98.06

GC content: 38.55

Gene sequence:

>2838_bases
ATGGATACCAAAAGACAATGCATGGCTTTAAAGGCTTCAGCAGGGAGCGGGAAGACTTTCGCTTTGAGCGTGCGGTTTTT
AGCCCTATTGTTTAAGGGGGCTAATCCTAGCGAGATTTTGACGCTCACTTTCACTAAAAAAGCCACCGCCGAAATGAAAG
AGCGCATTTTAGACTATTTAAAAATTTTGCAACAAGAAAACCTTGAAAATGAAAAAGAAAAATCCCAAAATATCCTAAAA
GAATTAGAAGAAAAATACCATTTAGACCCTAGCTTGGTGCAAAATAGCGCTCCAAAAATCTACCAACGCTTTTTAAACGC
TGAAATTAGAATCAGCACTATTGATGCGTTTTTCCAAAGCATTTTAAGGAAATTTTGCTGGTTTGTGGGGTTGAGCGCGA
ATTTTGAAGTCAATGAAGACACCAAAGCGCACCAGCAACAGCTTAATGAGGGTTTTTTGAGCGCTTTAAATGGCGAACAG
CTTGAAGCATTGAGCGTTTTTATCGCTCAATGCTTAAGTTATGATAGTTACACAAGCGATTCTATTTTAGAGCGGTTGCG
TTTTTTAAAAAACAAGCTCTATTTATTTGATCCTAATAAAAAAGAGCCTGCATTTGATGAAAAGGATTTTTTAGAAAAAC
TAAGGAGCTTAAACGAACAAATTCAAAGCATAGAAACAGCGTCAGATAGGGCTAAAACAGCCATTAAATGCGATGATTTT
AGGGGATTTTTAAACAGCTCTTTAACCTGGCTTGAAAAAAAGAGCGAATATCAATCTTTCAAAAAACTTAAAAGTGAAAT
CCCCACTTTAGAGAGCGAATGCGAAGAGATTGAAAACGATTTAAAACGCTATTATGAAGCCAAAGAAACCGCAATATTTA
AAAAATTCCCTAAATTCATCCAACTTTATGATAACGCCACTTCTAAAATCCAAGCCTTAGATTTTGATGCGATTAAAGAT
AAAGTCCATGTCTTATTGAATGGTTATGAAGAAATGCCGGCGGAGTTTTTTTATTTCAGGTTGGACAGCAAGATCGCGCA
CATTTTGATTGATGAGTTTCAAGACACGAGCTTGAACGATTATAAGATTTTAGCCCCTTTTATTGATGAGATTAAAGCCG
GGATAGGGCAAGCGAAATGGCACAGGAGCGTGTTTTTTGTGGGCGATGTCAAGCAGAGCATTTATGCCTTTAGGGGGAGT
TTTAGCTCTTTGTTTGAAAGCGTTTCTAAGGATTTTTACCACGATAATTTGGAATTTAACCACCGCAGTGCGCCTTTAAT
CATTAATTATGTGAACACCATTTTTAAAAAAGCTTATCAAAATTCCCCCACCGCTTATTTGGAGCAAAAATACCCTAAAA
CTTCTCAAAATAAACATGTTACAGACGGCTATGTTAAAGTCTCTTTAGTGGCTGATGAAAGAGAATTGTTATTAGATCAG
GTCTTACAAGAAGCTCAAAACCTTTTAGAACATCGTATTGAGCCTAAAGATATTACCATTTTATGCGCCACTAATGACGA
CGCTTTAGAAATCAAAAATTATTTGCAAGAGCGTTTGAGTGCGATTCGCCCAAGCACGGAATCTAGCGCAAAATTGTCTC
AATTTGTAGAGTCTAAAATCATTAAGAACGCTTTAGAATACGCTCTAGCGGAAGAACCTTACAAGCCTTTTTATAAGCAC
AGCGTTTTAAAACTCGCTGGATACTTGCATGATGATGCGATCGCTTTAGCTGGTTTTAACCCTAAAAAAGAGAGCGTGGC
AGGCTTTGTGTGGAAGGTGATGGAGCAATTTGAGCTTTATGGAGAGCCTGCACAAAGCTGTTTGGAATTAGCGGTTGGGT
GCGAAGATGCCGATGGATTTTTAGAAAAATTAGAGACTAAAGCGATCGCTTCTTCCCATTCAAAAGGCGCGCAGATCATG
ACCATTCACAAATCTAAAGGCATGCAATTCCCTTATGTGATCGTGTGCGAACGCTTGGGCAAGCCTAATTCAAGCCATTC
CAATCAACTCCTTGAAGAATATGACGGCACAGAGCTTCTTCGCCTTTATTACAGAATGAAAAATCGTGAGGTCGTAGATA
AAGATTACGCTAGGGCTTTAGACAAAGAAGAAGCGGCCAAAGATCATGAAGAGATTAATGTGTATTATGTCGCATTCACT
AGGGCTGAGTTAGGGCTGATTGTCGTGGCCAAAGACAAAAAAGAAAGCAAAAAAGAAAGCAAAAACAAAACAATGCGCGA
AAAATTGGATCTTGTGCCTTTAGAAGAGGGAGAAATCGCGCCGGTTATTTCTCCACAAAAAGAGCCTTTAATTACAAGCA
CTCTCATCAAGCCCCATGCCTATGGCGAGCAAGTCCAAGAGATAGAAGAAGAGCCTAGCGATTATGAAAAGAATAACGAC
CAGGAAGCGATCAACTTTGGTATCGCTTTGCACAAGGGGTTAGAATACCAATACGCTTATAACATTCCTAAACAAAGCGT
TTTAGAATATTTAAACTACCATCATGGTTTTTATGGTTTGGATTACCAGGCGTTAGAAGAAAGTTTAGAGCTTTTTGAAA
ACGATGCAGAGATACAAGCTCTTTTTAAAAATTTGCCCTTAAAGGGCGAAGCGGCTTTTTTATTCCAAGGGGTTGTGTCT
AGGATAGATGTTTTGTTGTGGGATAGGGGGCAAAATTTGTATGTTTTAGATTACAAAAGCTCTCAAAATTACCAGCAAAG
CCATAAAGCGCAAGTGTCTCATTATGCTGAGTTTTTGAAAACTCAAGCCCCCCATTTTAAGATACAAGCGGGCATTATTT
ACGCTCATAAAAGACTGCTTGAAAAATTATGGGTCTGA

Upstream 100 bases:

>100_bases
AACCCTACGATTATAGCAAAAGATTAAGGTTTTTTAGCTTAAGTAAAAAAGGCTTTTAGGTTATAATAAAGACAAAATTA
GAATTTTAGGATAGATCTCA

Downstream 100 bases:

>100_bases
AATTAAAAATTTTAAGGTTGTCTATGAATCTCAAAAAAACAGAAAACGCGCTCAGTTTGACGCTTAAGAACTTCATTAAA
AGCGAGTCTTTTGGAGGGAT

Product: recombination protein RecB

Products: NA

Alternate protein names: ATP-dependent helicase/nuclease AddA [H]

Number of amino acids: Translated: 945; Mature: 945

Protein sequence:

>945_residues
MDTKRQCMALKASAGSGKTFALSVRFLALLFKGANPSEILTLTFTKKATAEMKERILDYLKILQQENLENEKEKSQNILK
ELEEKYHLDPSLVQNSAPKIYQRFLNAEIRISTIDAFFQSILRKFCWFVGLSANFEVNEDTKAHQQQLNEGFLSALNGEQ
LEALSVFIAQCLSYDSYTSDSILERLRFLKNKLYLFDPNKKEPAFDEKDFLEKLRSLNEQIQSIETASDRAKTAIKCDDF
RGFLNSSLTWLEKKSEYQSFKKLKSEIPTLESECEEIENDLKRYYEAKETAIFKKFPKFIQLYDNATSKIQALDFDAIKD
KVHVLLNGYEEMPAEFFYFRLDSKIAHILIDEFQDTSLNDYKILAPFIDEIKAGIGQAKWHRSVFFVGDVKQSIYAFRGS
FSSLFESVSKDFYHDNLEFNHRSAPLIINYVNTIFKKAYQNSPTAYLEQKYPKTSQNKHVTDGYVKVSLVADERELLLDQ
VLQEAQNLLEHRIEPKDITILCATNDDALEIKNYLQERLSAIRPSTESSAKLSQFVESKIIKNALEYALAEEPYKPFYKH
SVLKLAGYLHDDAIALAGFNPKKESVAGFVWKVMEQFELYGEPAQSCLELAVGCEDADGFLEKLETKAIASSHSKGAQIM
TIHKSKGMQFPYVIVCERLGKPNSSHSNQLLEEYDGTELLRLYYRMKNREVVDKDYARALDKEEAAKDHEEINVYYVAFT
RAELGLIVVAKDKKESKKESKNKTMREKLDLVPLEEGEIAPVISPQKEPLITSTLIKPHAYGEQVQEIEEEPSDYEKNND
QEAINFGIALHKGLEYQYAYNIPKQSVLEYLNYHHGFYGLDYQALEESLELFENDAEIQALFKNLPLKGEAAFLFQGVVS
RIDVLLWDRGQNLYVLDYKSSQNYQQSHKAQVSHYAEFLKTQAPHFKIQAGIIYAHKRLLEKLWV

Sequences:

>Translated_945_residues
MDTKRQCMALKASAGSGKTFALSVRFLALLFKGANPSEILTLTFTKKATAEMKERILDYLKILQQENLENEKEKSQNILK
ELEEKYHLDPSLVQNSAPKIYQRFLNAEIRISTIDAFFQSILRKFCWFVGLSANFEVNEDTKAHQQQLNEGFLSALNGEQ
LEALSVFIAQCLSYDSYTSDSILERLRFLKNKLYLFDPNKKEPAFDEKDFLEKLRSLNEQIQSIETASDRAKTAIKCDDF
RGFLNSSLTWLEKKSEYQSFKKLKSEIPTLESECEEIENDLKRYYEAKETAIFKKFPKFIQLYDNATSKIQALDFDAIKD
KVHVLLNGYEEMPAEFFYFRLDSKIAHILIDEFQDTSLNDYKILAPFIDEIKAGIGQAKWHRSVFFVGDVKQSIYAFRGS
FSSLFESVSKDFYHDNLEFNHRSAPLIINYVNTIFKKAYQNSPTAYLEQKYPKTSQNKHVTDGYVKVSLVADERELLLDQ
VLQEAQNLLEHRIEPKDITILCATNDDALEIKNYLQERLSAIRPSTESSAKLSQFVESKIIKNALEYALAEEPYKPFYKH
SVLKLAGYLHDDAIALAGFNPKKESVAGFVWKVMEQFELYGEPAQSCLELAVGCEDADGFLEKLETKAIASSHSKGAQIM
TIHKSKGMQFPYVIVCERLGKPNSSHSNQLLEEYDGTELLRLYYRMKNREVVDKDYARALDKEEAAKDHEEINVYYVAFT
RAELGLIVVAKDKKESKKESKNKTMREKLDLVPLEEGEIAPVISPQKEPLITSTLIKPHAYGEQVQEIEEEPSDYEKNND
QEAINFGIALHKGLEYQYAYNIPKQSVLEYLNYHHGFYGLDYQALEESLELFENDAEIQALFKNLPLKGEAAFLFQGVVS
RIDVLLWDRGQNLYVLDYKSSQNYQQSHKAQVSHYAEFLKTQAPHFKIQAGIIYAHKRLLEKLWV
>Mature_945_residues
MDTKRQCMALKASAGSGKTFALSVRFLALLFKGANPSEILTLTFTKKATAEMKERILDYLKILQQENLENEKEKSQNILK
ELEEKYHLDPSLVQNSAPKIYQRFLNAEIRISTIDAFFQSILRKFCWFVGLSANFEVNEDTKAHQQQLNEGFLSALNGEQ
LEALSVFIAQCLSYDSYTSDSILERLRFLKNKLYLFDPNKKEPAFDEKDFLEKLRSLNEQIQSIETASDRAKTAIKCDDF
RGFLNSSLTWLEKKSEYQSFKKLKSEIPTLESECEEIENDLKRYYEAKETAIFKKFPKFIQLYDNATSKIQALDFDAIKD
KVHVLLNGYEEMPAEFFYFRLDSKIAHILIDEFQDTSLNDYKILAPFIDEIKAGIGQAKWHRSVFFVGDVKQSIYAFRGS
FSSLFESVSKDFYHDNLEFNHRSAPLIINYVNTIFKKAYQNSPTAYLEQKYPKTSQNKHVTDGYVKVSLVADERELLLDQ
VLQEAQNLLEHRIEPKDITILCATNDDALEIKNYLQERLSAIRPSTESSAKLSQFVESKIIKNALEYALAEEPYKPFYKH
SVLKLAGYLHDDAIALAGFNPKKESVAGFVWKVMEQFELYGEPAQSCLELAVGCEDADGFLEKLETKAIASSHSKGAQIM
TIHKSKGMQFPYVIVCERLGKPNSSHSNQLLEEYDGTELLRLYYRMKNREVVDKDYARALDKEEAAKDHEEINVYYVAFT
RAELGLIVVAKDKKESKKESKNKTMREKLDLVPLEEGEIAPVISPQKEPLITSTLIKPHAYGEQVQEIEEEPSDYEKNND
QEAINFGIALHKGLEYQYAYNIPKQSVLEYLNYHHGFYGLDYQALEESLELFENDAEIQALFKNLPLKGEAAFLFQGVVS
RIDVLLWDRGQNLYVLDYKSSQNYQQSHKAQVSHYAEFLKTQAPHFKIQAGIIYAHKRLLEKLWV

Specific function: The heterodimer acts as both an ATP-dependent DNA helicase and an ATP-dependent, dual-direction single-stranded exonuclease. Recognizes the chi site generating a DNA molecule suitable for the initiation of homologous recombination. The AddA nuclease domai

COG id: COG1074

COG function: function code L; ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 uvrD-like helicase C-terminal domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014152
- InterPro:   IPR014017
- InterPro:   IPR000212
- InterPro:   IPR011604
- InterPro:   IPR014016
- InterPro:   IPR011335 [H]

Pfam domain/function: PF00580 UvrD-helicase [H]

EC number: =3.6.4.12 [H]

Molecular weight: Translated: 108882; Mature: 108882

Theoretical pI: Translated: 5.62; Mature: 5.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDTKRQCMALKASAGSGKTFALSVRFLALLFKGANPSEILTLTFTKKATAEMKERILDYL
CCCHHHHHEEECCCCCCCEEEHHHHHHHHHHCCCCCCCEEEEEECHHHHHHHHHHHHHHH
KILQQENLENEKEKSQNILKELEEKYHLDPSLVQNSAPKIYQRFLNAEIRISTIDAFFQS
HHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHCCCHHHHHHHCCCCEEEHHHHHHHHH
ILRKFCWFVGLSANFEVNEDTKAHQQQLNEGFLSALNGEQLEALSVFIAQCLSYDSYTSD
HHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCHH
SILERLRFLKNKLYLFDPNKKEPAFDEKDFLEKLRSLNEQIQSIETASDRAKTAIKCDDF
HHHHHHHHHHCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEHHHH
RGFLNSSLTWLEKKSEYQSFKKLKSEIPTLESECEEIENDLKRYYEAKETAIFKKFPKFI
HHHHHCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QLYDNATSKIQALDFDAIKDKVHVLLNGYEEMPAEFFYFRLDSKIAHILIDEFQDTSLND
HHHHCHHHHEECCCHHHHHHHHHHHHCCHHHCCHHHEEHHHHHHHHHHHHHHHCCCCCCC
YKILAPFIDEIKAGIGQAKWHRSVFFVGDVKQSIYAFRGSFSSLFESVSKDFYHDNLEFN
CEEHHHHHHHHHHCCCHHHHHCCEEEEEHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCC
HRSAPLIINYVNTIFKKAYQNSPTAYLEQKYPKTSQNKHVTDGYVKVSLVADERELLLDQ
CCCCCCHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCCCCCCEEEEEEECCHHHHHHHH
VLQEAQNLLEHRIEPKDITILCATNDDALEIKNYLQERLSAIRPSTESSAKLSQFVESKI
HHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
IKNALEYALAEEPYKPFYKHSVLKLAGYLHDDAIALAGFNPKKESVAGFVWKVMEQFELY
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHHC
GEPAQSCLELAVGCEDADGFLEKLETKAIASSHSKGAQIMTIHKSKGMQFPYVIVCERLG
CCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCHHHHHHHHC
KPNSSHSNQLLEEYDGTELLRLYYRMKNREVVDKDYARALDKEEAAKDHEEINVYYVAFT
CCCCCHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHCHHHHHCCCCCEEEEEEEEE
RAELGLIVVAKDKKESKKESKNKTMREKLDLVPLEEGEIAPVISPQKEPLITSTLIKPHA
ECCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCH
YGEQVQEIEEEPSDYEKNNDQEAINFGIALHKGLEYQYAYNIPKQSVLEYLNYHHGFYGL
HHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHCCCCCCC
DYQALEESLELFENDAEIQALFKNLPLKGEAAFLFQGVVSRIDVLLWDRGQNLYVLDYKS
CHHHHHHHHHHHHCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHEEECCCEEEEEEECC
SQNYQQSHKAQVSHYAEFLKTQAPHFKIQAGIIYAHKRLLEKLWV
CCCHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MDTKRQCMALKASAGSGKTFALSVRFLALLFKGANPSEILTLTFTKKATAEMKERILDYL
CCCHHHHHEEECCCCCCCEEEHHHHHHHHHHCCCCCCCEEEEEECHHHHHHHHHHHHHHH
KILQQENLENEKEKSQNILKELEEKYHLDPSLVQNSAPKIYQRFLNAEIRISTIDAFFQS
HHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHCCCHHHHHHHCCCCEEEHHHHHHHHH
ILRKFCWFVGLSANFEVNEDTKAHQQQLNEGFLSALNGEQLEALSVFIAQCLSYDSYTSD
HHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCHH
SILERLRFLKNKLYLFDPNKKEPAFDEKDFLEKLRSLNEQIQSIETASDRAKTAIKCDDF
HHHHHHHHHHCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEHHHH
RGFLNSSLTWLEKKSEYQSFKKLKSEIPTLESECEEIENDLKRYYEAKETAIFKKFPKFI
HHHHHCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QLYDNATSKIQALDFDAIKDKVHVLLNGYEEMPAEFFYFRLDSKIAHILIDEFQDTSLND
HHHHCHHHHEECCCHHHHHHHHHHHHCCHHHCCHHHEEHHHHHHHHHHHHHHHCCCCCCC
YKILAPFIDEIKAGIGQAKWHRSVFFVGDVKQSIYAFRGSFSSLFESVSKDFYHDNLEFN
CEEHHHHHHHHHHCCCHHHHHCCEEEEEHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCC
HRSAPLIINYVNTIFKKAYQNSPTAYLEQKYPKTSQNKHVTDGYVKVSLVADERELLLDQ
CCCCCCHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCCCCCCEEEEEEECCHHHHHHHH
VLQEAQNLLEHRIEPKDITILCATNDDALEIKNYLQERLSAIRPSTESSAKLSQFVESKI
HHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
IKNALEYALAEEPYKPFYKHSVLKLAGYLHDDAIALAGFNPKKESVAGFVWKVMEQFELY
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHHC
GEPAQSCLELAVGCEDADGFLEKLETKAIASSHSKGAQIMTIHKSKGMQFPYVIVCERLG
CCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCHHHHHHHHC
KPNSSHSNQLLEEYDGTELLRLYYRMKNREVVDKDYARALDKEEAAKDHEEINVYYVAFT
CCCCCHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHCHHHHHCCCCCEEEEEEEEE
RAELGLIVVAKDKKESKKESKNKTMREKLDLVPLEEGEIAPVISPQKEPLITSTLIKPHA
ECCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCH
YGEQVQEIEEEPSDYEKNNDQEAINFGIALHKGLEYQYAYNIPKQSVLEYLNYHHGFYGL
HHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHCCCCCCC
DYQALEESLELFENDAEIQALFKNLPLKGEAAFLFQGVVSRIDVLLWDRGQNLYVLDYKS
CHHHHHHHHHHHHCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHEEECCCEEEEEEECC
SQNYQQSHKAQVSHYAEFLKTQAPHFKIQAGIIYAHKRLLEKLWV
CCCHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA