| Definition | Helicobacter pylori 26695, complete genome. |
|---|---|
| Accession | NC_000915 |
| Length | 1,667,867 |
Click here to switch to the map view.
The map label for this gene is Not Available
Identifier: 15646135
GI number: 15646135
Start: 1605956
End: 1607395
Strand: Reverse
Name: Not Available
Synonym: HP1527
Alternate gene names: NA
Gene position: 1607395-1605956 (Counterclockwise)
Preceding gene: 15646137
Following gene: 15646134
Centisome position: 96.37
GC content: 38.89
Gene sequence:
>1440_bases ATGAAAAAATCCCTTTGTCTGTCTTTCTTTCTGACTTTCTCTAACCCTCTTCAAGCCCTTGTGATCGAGCTTTTAGAAGA AATCAAAACTTCGCCGCATAAAGGCACTTTTAAGGCTAAAGTCCTTGATTCTAAAAAACCAAGACAAGTTTTAGGCGTTT ATAATATCTCCCCACACAAAAAACTCACGCTCACTATCACCCACATATCCACTGCAATCGTCTATCAACCCCTTGATGAA AAACTTTCTTTAGAAACAACCTTAAACCCTAACCGCCCTACTATCCCTAGAAACACCCAGATTGTTTTTTCTTCAAAAGA ATTGAAAGAGTCGCACCCGCACCAAATGCCTTCTTTAAACGCGCCCATGCAAAAACCACAAAACAAACCCCATTCATCGC AACAACCTTCTCAAAACTTTTCTTACCCAGAGCCCAAACTAGGCTCTAAAAACTCTAAAAACAGCCTTTTACAGCCTTTA GCAATTCCTAGCAAAATAAGTCCCACTAACGAAACTCAAACGCCAACAAACGACACTAAACCCCCTTTAAAGCATTCTTC AGAAGATCAAGAAAGCAACCTCTTTATAACGCCACCCACTGAAAAAACGCTCCCTAACAACACCTCTAACGCTGATATTA GTGAAAACAATGAAAGCAATGAGAATAAAGATAATGTGGAAAAACAAGCCATTAGAGATGCTAATATTAAAGAATTTGCA TGCGGGAAGTGGGTCTATGACGATGAAAATTTACAAGCCTACCGCCCAAGCATTTTAAAACGCGTTGATGAAGACAAACA AACTGCAACAGATATTACCCCTTGCGATTACAGCACCGCTGAAAATAAAAGCGGTAAAATCATTACCCCCTATACTAAAA TCTCCGTTCATAAAACAGAGCCTTTAGAAGAGCCACAAACTTTTGAAGCTAAAAATAATTTCGCCATTCTTCAAGCCAGA AGCTCTACAGAAAAATGCAAAAGGGCTAGAGCAAGAAAAGACGGCACGACTAGGCAATGCTATCTAATAGAAGAGCCTTT AAAACAAGCATGGGAGAGTGAGTATGAAATCACCACGCAATTAGTGAAAGCCATTTATGAGCGCCCCAAACAAGACGATC AAGTAGAGCCGACTTTTTATGAAACCAGCGAATTGGCTTATTCTTCCACACGAAAAAGCGAAATAACGCACAATGAATTG AATTTGAATGAAAAATTCATGGAATTTGTGGAAGTGTATGAGGGGCATTATTTAAACGATATAATTAAAGAGAGCAGTGA ATATAAAGAATGGGTTAAAAACCATGTGCGCTTTAAAGAAGGGGTGTGCATGGCTTTAGAAATAGAAGAACAGCCACGAG CTAAAAGCACGCCTTTGAGTATTGAAAACTCTCGTGTGGTATGTGTCAAAAAGGGGAATTATTTATTCAACGAAGTTTAA
Upstream 100 bases:
>100_bases ATTATTAATTAAAGTGTTACTTATCTATAACCTATTTATGACTTTTACTAAACCTTTTTTTAAGCTATAATCCAAAAATC TAAAATAAAAAGGAATAAGC
Downstream 100 bases:
>100_bases GATGGTGGCTTGAGGCGGAATCGAACCACCGACACGAAGATTTTCAGTCTTCTGCTCTACCGACTGAGCTATCAAGCCAA GCAAAAAGCAATTATTACAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 479; Mature: 479
Protein sequence:
>479_residues MKKSLCLSFFLTFSNPLQALVIELLEEIKTSPHKGTFKAKVLDSKKPRQVLGVYNISPHKKLTLTITHISTAIVYQPLDE KLSLETTLNPNRPTIPRNTQIVFSSKELKESHPHQMPSLNAPMQKPQNKPHSSQQPSQNFSYPEPKLGSKNSKNSLLQPL AIPSKISPTNETQTPTNDTKPPLKHSSEDQESNLFITPPTEKTLPNNTSNADISENNESNENKDNVEKQAIRDANIKEFA CGKWVYDDENLQAYRPSILKRVDEDKQTATDITPCDYSTAENKSGKIITPYTKISVHKTEPLEEPQTFEAKNNFAILQAR SSTEKCKRARARKDGTTRQCYLIEEPLKQAWESEYEITTQLVKAIYERPKQDDQVEPTFYETSELAYSSTRKSEITHNEL NLNEKFMEFVEVYEGHYLNDIIKESSEYKEWVKNHVRFKEGVCMALEIEEQPRAKSTPLSIENSRVVCVKKGNYLFNEV
Sequences:
>Translated_479_residues MKKSLCLSFFLTFSNPLQALVIELLEEIKTSPHKGTFKAKVLDSKKPRQVLGVYNISPHKKLTLTITHISTAIVYQPLDE KLSLETTLNPNRPTIPRNTQIVFSSKELKESHPHQMPSLNAPMQKPQNKPHSSQQPSQNFSYPEPKLGSKNSKNSLLQPL AIPSKISPTNETQTPTNDTKPPLKHSSEDQESNLFITPPTEKTLPNNTSNADISENNESNENKDNVEKQAIRDANIKEFA CGKWVYDDENLQAYRPSILKRVDEDKQTATDITPCDYSTAENKSGKIITPYTKISVHKTEPLEEPQTFEAKNNFAILQAR SSTEKCKRARARKDGTTRQCYLIEEPLKQAWESEYEITTQLVKAIYERPKQDDQVEPTFYETSELAYSSTRKSEITHNEL NLNEKFMEFVEVYEGHYLNDIIKESSEYKEWVKNHVRFKEGVCMALEIEEQPRAKSTPLSIENSRVVCVKKGNYLFNEV >Mature_479_residues MKKSLCLSFFLTFSNPLQALVIELLEEIKTSPHKGTFKAKVLDSKKPRQVLGVYNISPHKKLTLTITHISTAIVYQPLDE KLSLETTLNPNRPTIPRNTQIVFSSKELKESHPHQMPSLNAPMQKPQNKPHSSQQPSQNFSYPEPKLGSKNSKNSLLQPL AIPSKISPTNETQTPTNDTKPPLKHSSEDQESNLFITPPTEKTLPNNTSNADISENNESNENKDNVEKQAIRDANIKEFA CGKWVYDDENLQAYRPSILKRVDEDKQTATDITPCDYSTAENKSGKIITPYTKISVHKTEPLEEPQTFEAKNNFAILQAR SSTEKCKRARARKDGTTRQCYLIEEPLKQAWESEYEITTQLVKAIYERPKQDDQVEPTFYETSELAYSSTRKSEITHNEL NLNEKFMEFVEVYEGHYLNDIIKESSEYKEWVKNHVRFKEGVCMALEIEEQPRAKSTPLSIENSRVVCVKKGNYLFNEV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 54784; Mature: 54784
Theoretical pI: Translated: 7.09; Mature: 7.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKSLCLSFFLTFSNPLQALVIELLEEIKTSPHKGTFKAKVLDSKKPRQVLGVYNISPHK CCCHHEEHHHHHHCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCEEEEEECCCCC KLTLTITHISTAIVYQPLDEKLSLETTLNPNRPTIPRNTQIVFSSKELKESHPHQMPSLN EEEEEEEECCEEEEECCCCCCEEEEEECCCCCCCCCCCCEEEEECHHHHHCCCCCCCCCC APMQKPQNKPHSSQQPSQNFSYPEPKLGSKNSKNSLLQPLAIPSKISPTNETQTPTNDTK CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCHHCCCCCCCCCCCCCCCCCCCC PPLKHSSEDQESNLFITPPTEKTLPNNTSNADISENNESNENKDNVEKQAIRDANIKEFA CCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHH CGKWVYDDENLQAYRPSILKRVDEDKQTATDITPCDYSTAENKSGKIITPYTKISVHKTE CCCCEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEECCEEEEEEECCC PLEEPQTFEAKNNFAILQARSSTEKCKRARARKDGTTRQCYLIEEPLKQAWESEYEITTQ CCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHCCHHHHHHH LVKAIYERPKQDDQVEPTFYETSELAYSSTRKSEITHNELNLNEKFMEFVEVYEGHYLND HHHHHHHCCCCCCCCCCCEECHHHHHHHCCHHHHCCCCCCCCCHHHHHHHHHHCCHHHHH IIKESSEYKEWVKNHVRFKEGVCMALEIEEQPRAKSTPLSIENSRVVCVKKGNYLFNEV HHHCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCEEECCCEEEEEECCCCHHCCC >Mature Secondary Structure MKKSLCLSFFLTFSNPLQALVIELLEEIKTSPHKGTFKAKVLDSKKPRQVLGVYNISPHK CCCHHEEHHHHHHCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCEEEEEECCCCC KLTLTITHISTAIVYQPLDEKLSLETTLNPNRPTIPRNTQIVFSSKELKESHPHQMPSLN EEEEEEEECCEEEEECCCCCCEEEEEECCCCCCCCCCCCEEEEECHHHHHCCCCCCCCCC APMQKPQNKPHSSQQPSQNFSYPEPKLGSKNSKNSLLQPLAIPSKISPTNETQTPTNDTK CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCHHCCCCCCCCCCCCCCCCCCCC PPLKHSSEDQESNLFITPPTEKTLPNNTSNADISENNESNENKDNVEKQAIRDANIKEFA CCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHH CGKWVYDDENLQAYRPSILKRVDEDKQTATDITPCDYSTAENKSGKIITPYTKISVHKTE CCCCEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEECCEEEEEEECCC PLEEPQTFEAKNNFAILQARSSTEKCKRARARKDGTTRQCYLIEEPLKQAWESEYEITTQ CCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHCCHHHHHHH LVKAIYERPKQDDQVEPTFYETSELAYSSTRKSEITHNELNLNEKFMEFVEVYEGHYLND HHHHHHHCCCCCCCCCCCEECHHHHHHHCCHHHHCCCCCCCCCHHHHHHHHHHCCHHHHH IIKESSEYKEWVKNHVRFKEGVCMALEIEEQPRAKSTPLSIENSRVVCVKKGNYLFNEV HHHCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCEEECCCEEEEEECCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA