| Definition | Helicobacter pylori 26695, complete genome. |
|---|---|
| Accession | NC_000915 |
| Length | 1,667,867 |
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Identifier: 15646023
GI number: 15646023
Start: 1484029
End: 1484475
Strand: Reverse
Name: Not Available
Synonym: HP1413
Alternate gene names: 15646023
Gene position: 1484475-1484029 (Counterclockwise)
Preceding gene: 15646027
Following gene: 15646012
Centisome position: 89.0
GC content: 40.49
Gene sequence:
>447_bases ATGACCCCTGAACTAAACCTCAAATCCTTAGGCGCTAAAACGCCCTATATTTTTGAATACAACAGCCAGTTATTAGAAGC TTTCCCTAACCCAAACCCCAATTTAGACCCCTTAATCACGCTAGAGTGTAAGGAATTTACAAGCCTTTGCCCGATCACTT CCCAGCCGGATTTTGGCGTGATTTTTATCCGCTATATCCCTAAAGATAAAATGGTAGAAAGCAAGTCCTTAAAACTCTAT TTGTTCAGTTACAGAAACCATGGGAGTTTTCATGAGAGCTGTATCAATACGATTTTGCTAGATTTAGTCCGATTGCTAGA GCCAAAGTATTTGGAAGTGTATGGGGATTTTGCCTCTAGGGGTGGGATTGCGATCAAGCCCTTTGTGAATTATGCGATCA AAGAATACCAGGACTTTAAAGAGAAACGCCTTTTGAATGCGAAATAA
Upstream 100 bases:
>100_bases TCATCTAATAAAGCCGTAATCGTTTCTATGCGTTGGTTCATGAGTTTCCTAAAAAATGGGTTAAAATAGCCTTATTATAA CTTAAATCAAGGAAAGATTA
Downstream 100 bases:
>100_bases CGCGCAAAGATAGGGTTTTAAGATTAAAGCCATTCTAAATTAAACGGACAGATTAGGGGGAGAAGAAAAAAAGAAAAAGA AAAGAGATTAAAAAAAGGAG
Product: 7-cyano-7-deazaguanine reductase
Products: NA
Alternate protein names: 7-cyano-7-carbaguanine reductase; NADPH-dependent nitrile oxidoreductase; PreQ(0) reductase [H]
Number of amino acids: Translated: 148; Mature: 147
Protein sequence:
>148_residues MTPELNLKSLGAKTPYIFEYNSQLLEAFPNPNPNLDPLITLECKEFTSLCPITSQPDFGVIFIRYIPKDKMVESKSLKLY LFSYRNHGSFHESCINTILLDLVRLLEPKYLEVYGDFASRGGIAIKPFVNYAIKEYQDFKEKRLLNAK
Sequences:
>Translated_148_residues MTPELNLKSLGAKTPYIFEYNSQLLEAFPNPNPNLDPLITLECKEFTSLCPITSQPDFGVIFIRYIPKDKMVESKSLKLY LFSYRNHGSFHESCINTILLDLVRLLEPKYLEVYGDFASRGGIAIKPFVNYAIKEYQDFKEKRLLNAK >Mature_147_residues TPELNLKSLGAKTPYIFEYNSQLLEAFPNPNPNLDPLITLECKEFTSLCPITSQPDFGVIFIRYIPKDKMVESKSLKLYL FSYRNHGSFHESCINTILLDLVRLLEPKYLEVYGDFASRGGIAIKPFVNYAIKEYQDFKEKRLLNAK
Specific function: Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) [H]
COG id: COG0780
COG function: function code R; Enzyme related to GTP cyclohydrolase I
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GTP cyclohydrolase I family. QueF type 1 subfamily [H]
Homologues:
Organism=Escherichia coli, GI1789158, Length=89, Percent_Identity=39.3258426966292, Blast_Score=75, Evalue=2e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016856 - InterPro: IPR020602 [H]
Pfam domain/function: PF01227 GTP_cyclohydroI [H]
EC number: =1.7.1.13 [H]
Molecular weight: Translated: 17092; Mature: 16961
Theoretical pI: Translated: 8.02; Mature: 8.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPELNLKSLGAKTPYIFEYNSQLLEAFPNPNPNLDPLITLECKEFTSLCPITSQPDFGV CCCCCCHHHCCCCCCEEEECCHHHHHHCCCCCCCCCCEEEEEHHHHHHHCCCCCCCCCCE IFIRYIPKDKMVESKSLKLYLFSYRNHGSFHESCINTILLDLVRLLEPKYLEVYGDFASR EEEEECCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECHHHC GGIAIKPFVNYAIKEYQDFKEKRLLNAK CCEEEHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure TPELNLKSLGAKTPYIFEYNSQLLEAFPNPNPNLDPLITLECKEFTSLCPITSQPDFGV CCCCCHHHCCCCCCEEEECCHHHHHHCCCCCCCCCCEEEEEHHHHHHHCCCCCCCCCCE IFIRYIPKDKMVESKSLKLYLFSYRNHGSFHESCINTILLDLVRLLEPKYLEVYGDFASR EEEEECCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECHHHC GGIAIKPFVNYAIKEYQDFKEKRLLNAK CCEEEHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA