| Definition | Helicobacter pylori 26695, complete genome. |
|---|---|
| Accession | NC_000915 |
| Length | 1,667,867 |
Click here to switch to the map view.
The map label for this gene is Not Available
Identifier: 15645897
GI number: 15645897
Start: 1360547
End: 1361587
Strand: Reverse
Name: Not Available
Synonym: HP1284
Alternate gene names: NA
Gene position: 1361587-1360547 (Counterclockwise)
Preceding gene: 15645898
Following gene: 15645896
Centisome position: 81.64
GC content: 40.54
Gene sequence:
>1041_bases ATGGATTTTATAGGGTTTGAAGATTTAAAATGCAAAGATAAAGAAAACTCTCAAAAAGTTTTTGTGATCCGTAACGATAA GTTAGGCGATTTTATTTTAGCCATACCCGCTTTAATCGCTCTAAAGCATGCTTTTTTAGAAAAAGGCAAGGAAGTGTATT TGGGCGTGGTTGTACCTAGCTATACCACCCCAATCGCTTTAGAATTCCCTTTCATTGATGAAGTCATTATAGAAGACAAC CATTTGAGCGCCACTCTCAAAAGTAAACCCATTGACGCTCTTATCTTTTTATTTTCTAATTTTAAAAACGCCAGACTCGC TTTTAGTTTGAGGAAATCCATTCCTTATATCCTAGCCCCAAAGACTAAAATCTATTCTTGGCTTTATCAAAAGAGCGTGC GCCAAAGCCGATCGCTGTGTTTAAAAACCGAATACGAATACAATTTGGACTTAATCCATGCGTTTTGTAAAGATCACAAC CTCCCTAACGCCCAACTTAAAAAAATCGCATGGAAACTTAAAGACAAATCCAAAGAGCGATCCATCATCGCTTCAAAACT CAACGCTGATGTTGGTTTGTTGTGGATTGGCGTGCATATGCATAGCGGAGGCAGTTCGCCCGTATTGCCTGCCTCACACT TTATCAAACTGATTGATTGTTTACACAACAATTTAAGTTGTGAGATCATTCTTATTTGCGGGCCAGGCGAGAGGAAAGCC ACAGAAGAACTCCTTAAAAAAATCCCTTTCGCCCACCTCTATGATACGAGCCATAGTCTAGTGGATTTAGCCAAATTGTG CGCGAATTTGTCCGTTTATATCGGGAACGCTTCAGGCCCTTTGCATGTGAACGCTTTGTTTGACAACCAATCTATCGGGT TTTATCCTAACGAACTCAGCGCCTCTATTGCCAGATGGCGGCCTTTCAATGAGCGTTTTTTAGGCATCACCCCGCCTAAT GGCTCAAACGATATGGGTTTGATTGACATTGAAAAAGAGGGTGAAAAGATTGTGGGTTTTATCAATTACCGCAAGATGTA G
Upstream 100 bases:
>100_bases GCCCATAAAAGCATGGCAGAATAAAAAATAAAATTTATCCATCGCATAAGAACGATTTTTGCTAAAACATGACAAAAAAT TTGATCTCTTAGGCGGAGTT
Downstream 100 bases:
>100_bases ATTTGATAAGAGACTTTCTACTATAATCACACATTCGTTTATTCTTAATGTTTGCGTGGATTTTACATTGTTGAACACTA AAAAATAGGAGCTGTTTTTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 346; Mature: 346
Protein sequence:
>346_residues MDFIGFEDLKCKDKENSQKVFVIRNDKLGDFILAIPALIALKHAFLEKGKEVYLGVVVPSYTTPIALEFPFIDEVIIEDN HLSATLKSKPIDALIFLFSNFKNARLAFSLRKSIPYILAPKTKIYSWLYQKSVRQSRSLCLKTEYEYNLDLIHAFCKDHN LPNAQLKKIAWKLKDKSKERSIIASKLNADVGLLWIGVHMHSGGSSPVLPASHFIKLIDCLHNNLSCEIILICGPGERKA TEELLKKIPFAHLYDTSHSLVDLAKLCANLSVYIGNASGPLHVNALFDNQSIGFYPNELSASIARWRPFNERFLGITPPN GSNDMGLIDIEKEGEKIVGFINYRKM
Sequences:
>Translated_346_residues MDFIGFEDLKCKDKENSQKVFVIRNDKLGDFILAIPALIALKHAFLEKGKEVYLGVVVPSYTTPIALEFPFIDEVIIEDN HLSATLKSKPIDALIFLFSNFKNARLAFSLRKSIPYILAPKTKIYSWLYQKSVRQSRSLCLKTEYEYNLDLIHAFCKDHN LPNAQLKKIAWKLKDKSKERSIIASKLNADVGLLWIGVHMHSGGSSPVLPASHFIKLIDCLHNNLSCEIILICGPGERKA TEELLKKIPFAHLYDTSHSLVDLAKLCANLSVYIGNASGPLHVNALFDNQSIGFYPNELSASIARWRPFNERFLGITPPN GSNDMGLIDIEKEGEKIVGFINYRKM >Mature_346_residues MDFIGFEDLKCKDKENSQKVFVIRNDKLGDFILAIPALIALKHAFLEKGKEVYLGVVVPSYTTPIALEFPFIDEVIIEDN HLSATLKSKPIDALIFLFSNFKNARLAFSLRKSIPYILAPKTKIYSWLYQKSVRQSRSLCLKTEYEYNLDLIHAFCKDHN LPNAQLKKIAWKLKDKSKERSIIASKLNADVGLLWIGVHMHSGGSSPVLPASHFIKLIDCLHNNLSCEIILICGPGERKA TEELLKKIPFAHLYDTSHSLVDLAKLCANLSVYIGNASGPLHVNALFDNQSIGFYPNELSASIARWRPFNERFLGITPPN GSNDMGLIDIEKEGEKIVGFINYRKM
Specific function: Unknown
COG id: COG0859
COG function: function code M; ADP-heptose:LPS heptosyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002201 [H]
Pfam domain/function: PF01075 Glyco_transf_9 [H]
EC number: NA
Molecular weight: Translated: 39008; Mature: 39008
Theoretical pI: Translated: 8.79; Mature: 8.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDFIGFEDLKCKDKENSQKVFVIRNDKLGDFILAIPALIALKHAFLEKGKEVYLGVVVPS CCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEEECC YTTPIALEFPFIDEVIIEDNHLSATLKSKPIDALIFLFSNFKNARLAFSLRKSIPYILAP CCCCEEEECCCCCEEEEECCCCEEEECCCCHHHHHHHHHCCCCCEEEEEHHHCCCEEECC KTKIYSWLYQKSVRQSRSLCLKTEYEYNLDLIHAFCKDHNLPNAQLKKIAWKLKDKSKER HHHHHHHHHHHHHHHHHCEEEEECCCCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHH SIIASKLNADVGLLWIGVHMHSGGSSPVLPASHFIKLIDCLHNNLSCEIILICGPGERKA HHHHHHHCCCEEEEEEEEEEECCCCCCCCCHHHHHHHHHHHCCCCCEEEEEEECCCCCHH TEELLKKIPFAHLYDTSHSLVDLAKLCANLSVYIGNASGPLHVNALFDNQSIGFYPNELS HHHHHHHCCCEEEECCCHHHHHHHHHHCCEEEEEECCCCCEEEEEEECCCCCCCCCCHHH ASIARWRPFNERFLGITPPNGSNDMGLIDIEKEGEKIVGFINYRKM HHHHHCCCCCCCEEEEECCCCCCCCEEEEECCCCCEEEEEEEEECC >Mature Secondary Structure MDFIGFEDLKCKDKENSQKVFVIRNDKLGDFILAIPALIALKHAFLEKGKEVYLGVVVPS CCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEEECC YTTPIALEFPFIDEVIIEDNHLSATLKSKPIDALIFLFSNFKNARLAFSLRKSIPYILAP CCCCEEEECCCCCEEEEECCCCEEEECCCCHHHHHHHHHCCCCCEEEEEHHHCCCEEECC KTKIYSWLYQKSVRQSRSLCLKTEYEYNLDLIHAFCKDHNLPNAQLKKIAWKLKDKSKER HHHHHHHHHHHHHHHHHCEEEEECCCCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHH SIIASKLNADVGLLWIGVHMHSGGSSPVLPASHFIKLIDCLHNNLSCEIILICGPGERKA HHHHHHHCCCEEEEEEEEEEECCCCCCCCCHHHHHHHHHHHCCCCCEEEEEEECCCCCHH TEELLKKIPFAHLYDTSHSLVDLAKLCANLSVYIGNASGPLHVNALFDNQSIGFYPNELS HHHHHHHCCCEEEECCCHHHHHHHHHHCCEEEEEECCCCCEEEEEEECCCCCCCCCCHHH ASIARWRPFNERFLGITPPNGSNDMGLIDIEKEGEKIVGFINYRKM HHHHHCCCCCCCEEEEECCCCCCCCEEEEECCCCCEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]